KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:54 2014 Check: 00 .. Name: ENSP00000377783/1-676 Len: 719 Check: 963 Weight: 1.00 Name: ENSBTAP00000032310/1-675 Len: 719 Check: 2951 Weight: 1.00 Name: ENSTTRP00000006774/1-714 Len: 719 Check: 7740 Weight: 1.00 Name: bmy_09632T0/1-550 Len: 719 Check: 3361 Weight: 1.00 Name: BACU000061/1-646 Len: 719 Check: 9657 Weight: 1.00 // 1 50 ENSP00000377783/1-676 ---------- ---------- ---------- ---------- ---MRVLGGR ENSBTAP00000032310/1-675 ---------- ---------- ---------- ---------- ---MRVLGGR ENSTTRP00000006774/1-714 ARSQASPRRS SQTAALQADP RRRARGSPPR RATVPARASA RFAMRVLGGR bmy_09632T0/1-550 ---------- ---------- ---------- ---------- ---MRVLGGR BACU000061/1-646 ---------- ---------- ---------- ---------- ---MRVLGGR 51 100 ENSP00000377783/1-676 CGALLACLLL VLPVSEANFL SKQQASQVLV RKRRANSLLE ETKQGNLERE ENSBTAP00000032310/1-675 TGTLLACLAL VLPVLEANFL SRQHASQVLI RRRRANTLLE ETKKGNLERE ENSTTRP00000006774/1-714 SGALLACLAL VLPVLEANFL SKQHASQVLV RKRRANSLIE ETKKGNL-RE bmy_09632T0/1-550 SGALLACLAL VLPVLEANFL SKQHASQVLV RKSRANSLIE ETKKGNLERE BACU000061/1-646 SGALLACLAL VLPVLEANFL SKQHASQVLV RKSRANSLIE ETKKGNLERE 101 150 ENSP00000377783/1-676 CIEELCNKEE AREVFENDPE TDYFYPKYLV CLRSFQTGLF TAARQSTNAY ENSBTAP00000032310/1-675 CIEELCNKEE AREIFENNPE TEYFYPKYLG CLGSFRAGLF TAARLSTNAY ENSTTRP00000006774/1-714 CI-ELCNK-- AREVFENNPE TEYFYPKYLG CLGSFRAGLF TAARLSTNAY bmy_09632T0/1-550 CIEELCNKEE AREVFENDPE TEYFYPKYLG CLGSFRAGLF TTARLSTNAY BACU000061/1-646 CIEELCNKEE AREVFENDPE TEYFYPKYL- ---------- ---------- 151 200 ENSP00000377783/1-676 PDLRSCVNAI PDQCSPLPCN EDGYMSCKDG KASFTCTCKP GWQGEKCEFD ENSBTAP00000032310/1-675 PDLRSCVNAI SDQCNPLPCN EDGFMTCKDG QATFTCICKS GWQGEKCESD ENSTTRP00000006774/1-714 PDLRSCVNAI PDQCNPLPCN EDGYMTCKDG QATFTCICKS GWQGEKCEFD bmy_09632T0/1-550 PDLRSCVNAI SDQCNPLPCN EDGYMTCKDG QATFTCICKS GWQGEKCEFD BACU000061/1-646 --------AI SDQCNPLPCN EDGYMTCKDG QATFTCICKS GWQGEKCEFD 201 250 ENSP00000377783/1-676 INECKDPSNI NGGCSQICDN TPGSYHCSCK NGFVMLSNKK DCKDVDECSL ENSBTAP00000032310/1-675 INECKDPVNI NGGCSQICEN TPGSYHCSCK NGFVMLSNKK DCKDVDECVL ENSTTRP00000006774/1-714 INECKHPSNV NGGCSQICDN TPGSYHCSCK SGFFMLSNKK DCKDVDECSV bmy_09632T0/1-550 INECKDPSNV NGGCNQICDN TPGSYHCSCK SGFVMLSNKK DCKDVDECSV BACU000061/1-646 INECKDPSNV NGGCNQICDN TPGSYHCSCK SGFVMLSNKK DCRDVDECSV 251 300 ENSP00000377783/1-676 KPSICGTAVC KNIPGDFECE CPEGYRYNLK SKSCEDIDEC SENMCAQLCV ENSBTAP00000032310/1-675 KPSICGTAVC KNIPGDFECE CAEGYKYNPV SKSCDDVDEC AENLCAQLCV ENSTTRP00000006774/1-714 KPSICGTAVC KNIPGDFECE CTEGYRYNPV SKSCEDVDEC SENMCAQLCV bmy_09632T0/1-550 KPSICGTAVC KNIPGDFECE CTEGYRYNPI SKSCEDVDEC SENICAQLCV BACU000061/1-646 KPSICGTAVC KNIPGDFECE CTEGYRYNPI SKSCEDVDEC SENICAQLCV 301 350 ENSP00000377783/1-676 NYPGGYTCYC DGKKGFKLAQ DQKSCEVVSV CLPLNLDTKY ELLYLAEQFA ENSBTAP00000032310/1-675 NYPGGYSCYC DGKKGFKLAQ DQKSCEAVPV CLPLDLDKNY ELLYLAEQFV ENSTTRP00000006774/1-714 NHPGGYSCYC DGKKGFKLAQ DQKSCEAVPV CLPLNLDKNY ELLYLAEQFV bmy_09632T0/1-550 NHPGGYSCYC DGKKGFKLAQ DQKSCEAVPV CLPLNLDKNY ELLYLAEQFV BACU000061/1-646 NHPGGYSCYC DGKKGFKLAQ DQKSCEAVPV CLPLNLDKNY ELLYLAEQFV 351 400 ENSP00000377783/1-676 GVVLYLKFRL PEISRFSAEF DFRTYDSEGV ILYAESIDHS AWLLIALRGG ENSBTAP00000032310/1-675 GVVLYLKFRL PETTRFSAEF DFRTYDSEGV ILYAESSDHS AWFLIALREG ENSTTRP00000006774/1-714 GVVLYLKFRL PEITRFSAEF DFRTYDSEGV ILYAESSDHS AWFLIALREG bmy_09632T0/1-550 GVVLYLKFRL PEITRFSAEF DFRTYDSEGI ILYAESSDQS AWFLIALREG BACU000061/1-646 GVVLYLKFRL PEITRFSAEF DFRTYDSEGV ILYAESSDQS AWFLIALREG 401 450 ENSP00000377783/1-676 KIEVQLKNEH TSKITTGGDV INNGLWNMVS VEELEHSISI KIAKEAVMDI ENSBTAP00000032310/1-675 KIEIQFKNEK TTKMTTGGKV INDGLWHMVS VEELEQSISV KIAKEAVMNI ENSTTRP00000006774/1-714 KIEIQFKNEY TAKVTTGGKV INDGLWNMVS VEELEQSISV KIAKEAVMNI bmy_09632T0/1-550 KIEIQFKNEY TAKITTGGKV INDGLWNMVS VEELEQSISV KIAKEAVMNI BACU000061/1-646 KIEIQFKNEY TAKITTGGKV INDGLWNMVS VEELEQSISV KIAKEAVMNI 451 500 ENSP00000377783/1-676 NKPGPLFKPE NGLLETKVYF AGFPRKVESE LIKPINPRLD GCIRSWNLMK ENSBTAP00000032310/1-675 NKPGSLFKPT NGFLETKVYF AGVPRKMENA LIRPINPRLD GCIRGWNLMN ENSTTRP00000006774/1-714 NKPESLFXXX XXXXXXXXXX XXXXXXXXXX XXXXINPRLD GCIRGWNLMN bmy_09632T0/1-550 NKPESLFKPT NGFLETKVYF AGIPRKVENA LIRPINPRLD GCIRGWNLMN BACU000061/1-646 NKPESLFKPT NGFLETKVYF AAIPRKVENA LIRPINPRLD GCIRGWNLMN 501 550 ENSP00000377783/1-676 QGASGIKEII QEKQNKHCLV TVEKGSYYPG SGIAQFHIDY NNVSSAEGWH ENSBTAP00000032310/1-675 QGTSGVKEII QEKQNKHCLV NVEKGSYYPG TGVAQFSINY KNESNPEAWQ ENSTTRP00000006774/1-714 QGASGVKEII QEKQNKHCLV TVEKGSYYPG SGVAQFSIDY KNVSNPEAWQ bmy_09632T0/1-550 QGASGVKEII QEKQNKHCLV TVEKGSYYPG SGVAQFSIDY N--------- BACU000061/1-646 QGASGVKEII QEKQNKHCLV TVEKGSYYPG SGVAQFSIDY KNVSNPEAWQ 551 600 ENSP00000377783/1-676 VNVTLNIRPS TGTGVMLALV SGNNTVPFAV SLVDSTSEKS QDILLSVENT ENSBTAP00000032310/1-675 INVSLNIRPS AGTGVMLALV S-DNTVPFAL SLVDSATEKL QDILVSVESM ENSTTRP00000006774/1-714 VNVSLNIRPS SGTGVMLALV S-SNTVPFAL SLVDSATEEL QDILVSVENM bmy_09632T0/1-550 ---------- ---------- ---------- ---------- ---------- BACU000061/1-646 VNVSLNIRPS SGTGVMLALV S-SNTVPFAL SLVDSATEEL QDILVSVENM 601 650 ENSP00000377783/1-676 VIYRIQALSL CSDQQSHLEF RVNRNNLELS TPLKIETISH EDLQRQLAVL ENSBTAP00000032310/1-675 VIGRIEAISL CSDQQTFLEI RVNRNNLELS TQLRKDSFHS EDFQRQFAIL ENSTTRP00000006774/1-714 VIARIEALSL CSNQQSLLEI RVNRNNLELL TQNRKDSFHS EDFQRQFAIL bmy_09632T0/1-550 ---------- ---------- ---------- ---------- ---------- BACU000061/1-646 VIARIEALSL CSNQQSLLEI RVNRNNVELL TQHRKDSFHS EDFQRQFAIL 651 700 ENSP00000377783/1-676 DKAMKAKVAT YLGGLPDVPF SATPVNAFYN GCMEVNINGV QLDLDEAISK ENSBTAP00000032310/1-675 DEAMKGTVVT YLGGLPDVPF SATPVNAFYQ GCMEVNINGV QVDLDEAISK ENSTTRP00000006774/1-714 NKAMKETVAT YLGGLPDVPF SATPVNAFYN GCMEVNINGV QLDLDEAISK bmy_09632T0/1-550 ---------- -------VPF SATPVNAFYN GCMEVNINGV QLDLDEAISK BACU000061/1-646 DKAMKETVAT YLGGLPDVPF SATPVNAFYN GCMEVNINGV QLDLDEAISK 701 750 ENSP00000377783/1-676 HNDIRAHSCP SVWKKTKNS ENSBTAP00000032310/1-675 HNDIRAHSCP SVWQKTKHT ENSTTRP00000006774/1-714 HNDIRAHSCP SVWKKTKNT bmy_09632T0/1-550 HNDIRAHSCP SVWKKTKNT BACU000061/1-646 HNDIRAHSCP SVWKKTKNT