KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:55 2014 Check: 00 .. Name: ENSTTRP00000007736/1-667 Len: 1484 Check: 2253 Weight: 1.00 Name: BACU000041/1-1386 Len: 1484 Check: 8701 Weight: 1.00 Name: ENSP00000377700/1-699 Len: 1484 Check: 7424 Weight: 1.00 Name: bmy_06529T0/1-576 Len: 1484 Check: 7346 Weight: 1.00 Name: ENSBTAP00000032319/1-700 Len: 1484 Check: 5431 Weight: 1.00 // 1 50 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 MPEESTYPKP NAILKSVFPF LLLSHQKKIT DVLAKSEPKP GTPEDLQKLM ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 KDYYSSNRSV IELEELTLPV CPKWVKLRKN HSEKKSVLML IICGSAIRAL ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 ELIRSMTAFK GDSKVMKLFA KHIKVQEQVK LLEKRVVHLG VGTPGRIKEL ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 IKQGGLNLNP LKFLVFDWNW RDQKLRRMMD IPEKYIWVTR RTTMKRISQD ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 CQSGLPDNSA VKQQQLPAYR LQLSANKILS GFFATGVFCL GVGVILLLSA ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 KTIKEVEINY TEKCANCAKL RENAANFDKE CNCSIPFFLP ETMKGNVYMY ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 YKLYGFYQNL YRYILSRSNS QLVGTDVKDV RNCAPFKTSH NGIPIAPCGA ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 IANSMFNARI AHCLYLVYEL DEEDPGNNGF INDDFIVWMR TAAFPTFKKL ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 YRRLHRIEHF TEGLPAGSYS FNITYRSSAL ESYVTNYIPT CYTSQYAGRK ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 NGVKKLSPRL PRTFYDAGSE SVSAPGPLFG KVTWTSTAMA EGEEVLPLPT ENSP00000377700/1-699 ---------- ---------- ---------- --------MA EGEDVPPLPT bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- --------MA EGEEVLPLPT 501 550 ENSTTRP00000007736/1-667 ------EKDL EEALEAGGCD LETLRNIIQG RPLPADLRAK VWKIALNVAG BACU000041/1-1386 PGGDGWEKDL EEALEAGGCD LETLRNIIQG RPLPADLRAK VWKIALNVAG ENSP00000377700/1-699 SSGDGWEKDL EEALEAGGCD LETLRNIIQG RPLPADLRAK VWKIALNVAG bmy_06529T0/1-576 -----REKDL EEALEAGGCD LETLRNIIQG RPLPADVRAK VWKIALNVAG ENSBTAP00000032319/1-700 SGDEGWEKDL EEALEAGGCD LETLRNIIQG RPLPADLRAK VWKIALNVAG 551 600 ENSTTRP00000007736/1-667 KGDSLASWDG ILDLPEQNTI HKDCLEFIDQ L-SVPEEKGA ELLLDIESVI BACU000041/1-1386 KGDSLASWDG ILDLPEQNTI HKDCLEFIDQ LSSVPEEKAA ELLLDIESVI ENSP00000377700/1-699 KGDSLASWDG ILDLPEQNTI HKDCLQFIDQ L-SVPEEKAA ELLLDIESVI bmy_06529T0/1-576 KGDSLASWDG ILDLPEQNTI HKDCLEFIDQ L-SVPEEKAA ELLLDIESVI ENSBTAP00000032319/1-700 KGDSLASWDG ILDLPEQNTI HKDCLEFIDH L-SVPEEKAA QLLLDIESVI 601 650 ENSTTRP00000007736/1-667 TFYCKSRNIK YSTSLSWIHL LKPLVHLQLP RSDLYNCFYA IMNKYIPRDC BACU000041/1-1386 TFYCKSRNIK YSTYLSWIHL LKPLVRLQLP RSDLYNCFYA IMNKYIPR-- ENSP00000377700/1-699 TFYCKSRNIK YSTSLSWIHL LKPLVHLQLP RSDLYNCFYA IMNKYIPRDC bmy_06529T0/1-576 TFYCKSRNIK YSTSLSWIHL LKPLVRLQLP RSDLYNCFYA IMNKYIPRDC ENSBTAP00000032319/1-700 TFYCKSRNIK YSSTLSWIHL LKPLVHLQLP RSDLYNCFYA IMNKYIPRDC 651 700 ENSTTRP00000007736/1-667 SLKGRPFHLF RLLIQYHEPE LCSFLDTKKI TPDSYALNWL GSLFSCYCSI BACU000041/1-1386 ---------- ---------- ---------- ---------- ---------- ENSP00000377700/1-699 SQKGRPFHLF RLLIQYHEPE LCSYLDTKKI TPDSYALNWL GSLFACYCST bmy_06529T0/1-576 SLKGRPFHLF RLLIQYHEPE LCSFLDTKKI TPDSYALNW- ---------- ENSBTAP00000032319/1-700 SLKGRPFHLF RLLIQYHEPE LCSFLDTKKI TPDSYALNWL GSLFACYCSI 701 750 ENSTTRP00000007736/1-667 EVTQAIWDGY LQQADPFFIY FLMLIILVNA KEVILAQESN SKEEVIQFLE BACU000041/1-1386 ---------- ---------- ---------- -EVILAQESD SKEEVIQFLE ENSP00000377700/1-699 EVTQAIWDGY LQQADPFFIY FLMLIILVNA KEVILTQESD SKEEVIKFLE bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 EVTQAIWDGY LQQADPFFIY FLMLIILVNA KEVILGQESD SKEEVIQFLE 751 800 ENSTTRP00000007736/1-667 NTPSSLNLED IEDLFSLAQY YCSKTPASFR KDNHHLFGST LLGIKDDDAD BACU000041/1-1386 NTPSSLNLED IEDLFSLAQY YCSKTPASFR KDNHHLFGST LLGIKDDDAD ENSP00000377700/1-699 NTPSSLNIED IEDLFSLAQY YCSKTPASFR KDNHHLFGST LLGIKDDDAD bmy_06529T0/1-576 ---------- ---------- ---------- -DNHHLFGST LLGIKDDDAD ENSBTAP00000032319/1-700 NTPSSLNLED IEDLFSLAQY YCSKTPASFR KDNHHLFGST LLGIKDDDAD 801 850 ENSTTRP00000007736/1-667 LSQALCLAIS VSEILQANQL QGEGVRFFVV DCRPAEQYNA GHLSTAFHLD BACU000041/1-1386 LSQALCLAIS VSEILQANQL QGEGVRFFVV DCRPAEQYNA GHLSTAFHLD ENSP00000377700/1-699 LSQALCLAIS VSEILQANQL QGEGVRFFVV DCRPAEQYNA GHLSTAFHLD bmy_06529T0/1-576 LSQALCLAIS VSEILQANQL QGEGVRFFVV DCRPAEQYNA GHLSTAFHLD ENSBTAP00000032319/1-700 LSQALCLAIS VSEILQANQL QGEGVRFFVV DCRPAEQYNA GHLSTAFHLD 851 900 ENSTTRP00000007736/1-667 SDLXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU000041/1-1386 SDLMLQNPSE FAQSVKSLLE AQKQSIESGS IAGGEHLCFM GSGREEEDMY ENSP00000377700/1-699 SDLMLQNPSE FAQSVKSLLE AQKQSIESGS IAGGEHLCFM GSGREEEDMY bmy_06529T0/1-576 SDLMLQNPCE FAQSVKSLLE AQKQSIESGS IAGGEHLCFM GSGREEEDMY ENSBTAP00000032319/1-700 SDLMLQNPSE FAQSVKSLLE AQKQSIESGS IAGGEHLCFM GSGREEEDMY 901 950 ENSTTRP00000007736/1-667 XXXXXXXXXX KNKEYVSIAS GGFMALQQHL ADINVDGPEN GYGHWIASTS BACU000041/1-1386 MNMVLAHFLQ KNKEYVSIAS GGFMALQQHL ADINVDGPEN GYGHWIASTS ENSP00000377700/1-699 MNMVLAHFLQ KNKEYVSIAS GGFMALQQHL ADINVDGPEN GYGHWIASTS bmy_06529T0/1-576 MNMVLAHFLQ KNKEYVSIAS GGFMALQQHL ADINVDGPEN GYGHWIASTS ENSBTAP00000032319/1-700 MNMVLAHFLQ KNKEYVSIAS GGFMALQQHL ADINVDGPEN GYGHWIASTS 951 1000 ENSTTRP00000007736/1-667 GSRSSVNSSL DGESSNGSND RGMKSLVNKM TVALKTKSVN VREKVISFIE BACU000041/1-1386 GSRSSINSSV DGESSNGSND RGMKSLVNKM TVALKTKSVN VREKVISFIE ENSP00000377700/1-699 GSRSSIN-SV DGESPNGSSD RGMKSLVNKM TVALKTKSVN VREKVISFIE bmy_06529T0/1-576 GSRSSINSSV DGESSNGSND RGMKSLVNKM TVALKTKSVN VREKVISFIE ENSBTAP00000032319/1-700 GSRSSINSSV DGESSNGSND RGMKSLVNKM TVALKTKSVN VREKVISFIE 1001 1050 ENSTTRP00000007736/1-667 NTSTPVD--- ---------- --RHVSSSDR VGKPYRGVKP VFSIGDEEEY BACU000041/1-1386 NTSTPVD--- ---------- --RHVSSSDR VGKPYRGVKP VFSIGDEEEY ENSP00000377700/1-699 NTSTPVDRMS FNLPWPDRSC TERHVSSSDR VGKPYRGVKP VFSIGDEEEY bmy_06529T0/1-576 NTSTPVD--- ---------- --RHVSSSDR VGKPYRGVKP VFSIGDEEEY ENSBTAP00000032319/1-700 NTSTPVDRMS FNLPWPDRTC TERHVSSSDR VGKPYRGVKP VFSIGDEEEY 1051 1100 ENSTTRP00000007736/1-667 DTDEIDSSSM SDDDRKEVVN IQTWINKPDV KHHFPCKEVK ESGHIFPSHL BACU000041/1-1386 DTDEIDSSSM SDDDRKEVVN IQTWINKPDV KHHFPCKEVK ESGHIFPSHL ENSP00000377700/1-699 DTDEIDSSSM SDDDRKEVVN IQTWINKPDV KHHFPCKEVK ESGHMFPSHL bmy_06529T0/1-576 DTDEIDSSSM SDDDRKEVVN IQTWINKPDV KHHFPCKEVK ESGHIFPSHL ENSBTAP00000032319/1-700 DTDEIDSSSM SDDDRKEVVN IQTWINKPDV KHHFPCKEVK ESGHMFPSHL 1101 1150 ENSTTRP00000007736/1-667 LVTATHMYCL REILSRKGLA YIQSRQALNS VVKITSKKKH PELITFKYGN BACU000041/1-1386 LVTATHMYCL REILSRKGLA YIQSRQALNS VVKITSKKKH PELITFKYGN ENSP00000377700/1-699 LVTATHMYCL REIVSRKGLA YIQSRQALNS VVKITSKKKH PELITFKYGN bmy_06529T0/1-576 LVTATHMYCL REILSRKGLA YIQSRQALNS VVKITSKKKH PELITFKYGN ENSBTAP00000032319/1-700 LVTATHMYCL REILSRKGLA YIQSRQALNS VVKITSKKKH PELITFKYGN 1151 1200 ENSTTRP00000007736/1-667 SSTSGIEILA IER------- ---------- ---------- ---------- BACU000041/1-1386 SSTSGIEILA IERVNPEPNR PSSKARVCRC CLSGDVFTVT GETQREKSLI ENSP00000377700/1-699 SSASGIEILA IER------- ---------- ---------- ---------- bmy_06529T0/1-576 SSTSGIEILA IER------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 SSASGIEILA IER------- ---------- ---------- ---------- 1201 1250 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ------YLIP BACU000041/1-1386 VGFQTRQQRR AFRLALIQLH VSSVKSDNLA RACGLIWEAA KQGAKIVSLP ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ------YLIP bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ------YLIP ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ------YLIP 1251 1300 ENSTTRP00000007736/1-667 NA-------- ---------- GDATK----- ---------- ---------- BACU000041/1-1386 ECFNSPYGTK YFPEYAEKIP GDSTQKLSEV AKECGIYVIG GSIPEEDAGK ENSP00000377700/1-699 NA-------- ---------- GDATK----- ---------- ---------- bmy_06529T0/1-576 NA-------- ---------- GDATK----- ---------- ---------- ENSBTAP00000032319/1-700 NA-------- ---------- GDATK----- ---------- ---------- 1301 1350 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 LYNTCAVFGP DGTLLVKHRK LHLFDIDVPG KITFQESKTL SPGDSFSTFD ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 1351 1400 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 TPYCRVGLGI CYDIRFAELA QIYAQRGCQL LVYPAAFNLT TGPAHWELLQ ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 1401 1450 ENSTTRP00000007736/1-667 ---------- ---------- ---------- ---------- ---------- BACU000041/1-1386 RGRAVDNQVY VATASPARDD KASYVAWGHS TVVSPWGEVL VKAGTEEMVV ENSP00000377700/1-699 ---------- ---------- ---------- ---------- ---------- bmy_06529T0/1-576 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032319/1-700 ---------- ---------- ---------- ---------- ---------- 1451 1500 ENSTTRP00000007736/1-667 ---------- AIKQQI---- -----MKVLD ALES BACU000041/1-1386 YSDIDLKKLA EIRQQIPIFS QKRSDLYAVE AKKP ENSP00000377700/1-699 ---------- AIKQQI---- -----MKVLD ALES bmy_06529T0/1-576 ---------- AIKQQI---- -----MKVLD ALES ENSBTAP00000032319/1-700 ---------- AIKQQI---- -----MKVLD ALES