KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:56 2014 Check: 00 .. Name: ENSP00000457258/1-542 Len: 545 Check: 6639 Weight: 1.00 Name: ENSBTAP00000032330/1-542 Len: 545 Check: 4357 Weight: 1.00 Name: ENSTTRP00000012854/1-544 Len: 545 Check: 7925 Weight: 1.00 Name: bmy_15084T0/1-519 Len: 545 Check: 8469 Weight: 1.00 Name: BACU020086/1-543 Len: 545 Check: 3454 Weight: 1.00 // 1 50 ENSP00000457258/1-542 MNGKRPAEPG PARVGKKGKK EVMAEFSDAV TEETLKKQVA EAWSRRTPFS ENSBTAP00000032330/1-542 MNGKRPAEPG SDRAGKKVKK EVMAKFSDAV TEETLKKQVA EAWSRRTPFR ENSTTRP00000012854/1-544 MSGKRPAEPV TGRAGKKGKK EVMAKFSDAV TEETLKKQVA EAWSRRTPFR bmy_15084T0/1-519 MSGKRPAEPV PGRAGKRGKK EVMAKFSDAV TEETLKKQVA EAWSRRTPFR BACU020086/1-543 MSGKRPAEPV PGRAGKKGKK EVMAKFSDAV TEETLKKQVA EAWSLRTPFR 51 100 ENSP00000457258/1-542 HEVIVMDMDP FLHCVIPNFI QSQDFLEGLQ KELMNLDFHE KYNDLYKFQQ ENSBTAP00000032330/1-542 HEAIVMDMDP FLHCVIPNFI QSQNFLEGLQ KELLNLDFHE KYNDLYKFQQ ENSTTRP00000012854/1-544 HEAIVMDMDP FLHCVIPNFI QSENFLEGLQ KELLNLDFHE KYNDLYKFQQ bmy_15084T0/1-519 HEAIVMDMDP FLHCVIPNFI QSENFLEGLQ KELLNLDFHE K--------- BACU020086/1-543 HEAIVMDMDP FLHCVIPNFI ESENFLEGLQ KELLNLDFHE KYNDLYKFQQ 101 150 ENSP00000457258/1-542 SDDLKKRREP HISTLRKILF EDFRSWLSDI SKIDLESTID MSCAKYEFTD ENSBTAP00000032330/1-542 SDDLKKRREP HICALRKILF EHFRSWISDI SKIDLESTID MSCAKYEFSD ENSTTRP00000012854/1-544 SDDLKKRREP HICALRKILF EHFRAWLSDI SKIDLESTID MSCAKYEFSD bmy_15084T0/1-519 ---------- ------KILF EHFRAWLSDI SKIDLESTID VSCAKYEFSD BACU020086/1-543 SDDLKKRREP HICALRKILF EHFRAWLSDI SKIDLESTID VSCAKYEFSD 151 200 ENSP00000457258/1-542 ALLCHDDELE GRRIAFILYL VPPWDRSMGG TLDLYSIDEH FQPKQIVKSL ENSBTAP00000032330/1-542 ALLCHDDELE GRRIAFILYL VPPWDASLGG TLDLFSVDEH FQPKQIVKSL ENSTTRP00000012854/1-544 ALLCHDDELE GRRIAFILYL VPPWDRSLGG TLDLYNVDEH FQPKQIVKSL bmy_15084T0/1-519 ALLCHDDELE GRRIAFILYL VPPWDRSLGG TLDLYNVDEH FQPKQIVKSL BACU020086/1-543 ALLCHDDELE GRRIAFILYL VPPWDRSLGG TLDLYNVDEH FQPKQIVKSL 201 250 ENSP00000457258/1-542 IPSWNKLVFF EVSPVSFHQV SEVLSEEKSR LSISGWFHGP SLTRPPNYFE ENSBTAP00000032330/1-542 IPSWNTLVFF EVSPVSFHQV SEVLSEEKSR LSISGWFHGP SLTRPPTYFE ENSTTRP00000012854/1-544 IPSWNTLVFF EVSPVSFHQV SEVLSEEKSR LSISGWFHGP LLTRPPTYFE bmy_15084T0/1-519 IPSWNTLVFF EVSPVSFHQV SEVLSEEKSR LSISGWFHGP SLTRPPTYFE BACU020086/1-543 IPSWNTLVFF EVSPVSFHQV SEVLSEEKSR LSISGWFHGP SLTRPPTYFE 251 300 ENSP00000457258/1-542 PPIPRSPHIP QDHEILYDWI NPTYLDMDYQ VQIQEEFEES SEILLKEFLK ENSBTAP00000032330/1-542 PLIARSPHIP QDHEILYDWI NPTYLDMEYQ AQIQEEFEES SEILLKEFLQ ENSTTRP00000012854/1-544 PLIPRSPHVP QDHEILYDWI NPTYLDMEYQ VQIQEEFEES SEILLKEFLK bmy_15084T0/1-519 PLIPRSPHIP QDHEILYDWI NPTYLDMEYQ VQIQEEFEES SEILLKEFLK BACU020086/1-543 PLIPRSPHIP QDHEILYDWI NPTYLDMEYQ VQIQEEFEES SEILLKEFLK 301 350 ENSP00000457258/1-542 PEKFTKVCEA LEHGHVEWSS RGPPNKRFYE KAEESKLPEI LKECMKLFRS ENSBTAP00000032330/1-542 PEKFAEVCEA LERGRVEWSS RGPPNKRFYE KAEESQLPDI LRDCMALFRS ENSTTRP00000012854/1-544 PEKFAEVCEA LEKGDVEWSS RGPPNKRFYE KAEESKLPNI LKDCMALFRS bmy_15084T0/1-519 SEKFAEVCEA LEKGDVEWSS RGPPNKRFYE KAEESKLPDI LKDCMALFRS BACU020086/1-543 PEKFAEVCEA LEKGDVEWSS RGPPNKRFYE KAEESKLPDI LKDCMALFRS 351 400 ENSP00000457258/1-542 EALFLLLSNF TGLKLHFLAP SEEDEMNDKK EAE---TTDI TEEGTSHSPP ENSBTAP00000032330/1-542 EAMFLLLSNF TGLKLHFLAP S-EDEPEDKK ERDAVSAAEN TEEGTSHSSS ENSTTRP00000012854/1-544 EAMFLLLSNF TGLKLHFLAP SEEGELEDKK EGEAASAAEN TEEGPSRS-S bmy_15084T0/1-519 EAMFLLLSNF TGLKLHFLAP SEEGELEDKK EGEAASAADD TEEGPSRS-S BACU020086/1-543 EAMFLLLSNF TGLKLHFLAP S-EGELEDKK EGEAASAADD TEEGPSRS-S 401 450 ENSP00000457258/1-542 EPENNQMAIS NNSQQSNEQT DPEPEENETK KESSVPMCQG ELRHWKTGHY ENSBTAP00000032330/1-542 EPENSWAATS DSSLQSEGPT D--PEEDEAK KESSVPTCQG ELRHWKTGHY ENSTTRP00000012854/1-544 EPESRQVAIS NSSQQSNEQM DPEPEENDAK KESSVPTCQG ELRHWKTGHY bmy_15084T0/1-519 EPESRRAASS SSSQQSNEQT DPEPEENDAK KESGVPTCQG ELRHWKTGHY BACU020086/1-543 EPESRRAAIS SSSQQSNEQT DPEPEENDAK KESSVPTCQG ELRHWKTGHY 451 500 ENSP00000457258/1-542 TLIHDHSKAE FALDLILYCG CEGWEPEYGG FTSYIAKGED EELLTVNPES ENSBTAP00000032330/1-542 TLIHDNSKTE FALDLLLYCG CEGWEPEYGG FTSYIAKGED EELLTVNPEN ENSTTRP00000012854/1-544 TLIHDNSKTE FALDLLLYCG CEGWEPEYGG FTSYIAKGED EELLTVNPEN bmy_15084T0/1-519 TLIHDNSKTE FALDLLLYCG CEGWEPEYGG FTSYIAKGDD EELLTVNPEN BACU020086/1-543 TLIHDNSKTE FALDLLLYCG CEGWEPEYGG FTSYIAKGED EELLTVNPEN 501 550 ENSP00000457258/1-542 NSLALVYRDR ETLKFVKHIN HRSLEQKKTF PNRTGFWDFS FIYYE ENSBTAP00000032330/1-542 NSLALVYRDR ETLKFVKHIN HRSLEQKKSF PNRTGFWDFS FVYYE ENSTTRP00000012854/1-544 NSLALVYRDR ETLKFVKHIN HRSLEQKKTF PNRTGFWDFS FVYYE bmy_15084T0/1-519 NSLALVYRDR ETLKFVKHIN HRSLEQKKTF PNRTGFWDFS FVYYE BACU020086/1-543 NSLALVYRDR ETLKFVKHIN HRSLEQKKTF PNRTGFWDFS FVYYE