KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:03 2014 Check: 00 .. Name: ENSP00000367356/1-890 Len: 898 Check: 3323 Weight: 1.00 Name: ENSBTAP00000032454/1-805 Len: 898 Check: 7242 Weight: 1.00 Name: bmy_16408T0/1-682 Len: 898 Check: 7777 Weight: 1.00 Name: BACU017220/1-865 Len: 898 Check: 8537 Weight: 1.00 Name: ENSTTRP00000004165/1-862 Len: 898 Check: 7098 Weight: 1.00 // 1 50 ENSP00000367356/1-890 MSRSATLLLC LLGCHVWKAV TKTLREPGAG AQEVTLKVHI SDASTHQPVA ENSBTAP00000032454/1-805 ---------- ---------- ---------- --EVTLKVHI SDASTHQPVP bmy_16408T0/1-682 ---------- ---------- ---------- ---------- ---------- BACU017220/1-865 ---------- ---------- ---------- ---VTLKVHI SDASTHQPVP ENSTTRP00000004165/1-862 ---------- ---------- ---------- ---VNLKVHI SDASTHQPVP 51 100 ENSP00000367356/1-890 DALIEIFTNQ ASIASGTSGT DGVAFIKFQY KLGSQLIVTA SKHAYVPNSA ENSBTAP00000032454/1-805 DALIEIFTNQ VSIASGTSGT DGVAFIKFQY KLGSQLIVTA TKHAYVPNSA bmy_16408T0/1-682 ---------- ---------- ---------- ---------- MDTGYDSNLE BACU017220/1-865 DALIEIFTNQ VSIASGTSGT DGVAFLKFQY KLGSQLIVTA TKHAYVPNSA ENSTTRP00000004165/1-862 DALIEIFTNQ VSIASGTSGT DGIAFLKFQY KLGSQLIVTA TKHAYVPNSA 101 150 ENSP00000367356/1-890 PWKPIRLPVF SSLSLGLLPE RSATLMVYED VVQIVSGFQG ARPQPRVHFQ ENSBTAP00000032454/1-805 PWKPIRLPVF SSLSLGLLPE RSATLMVYED VVQIVSGFQG ARPQPRVHFQ bmy_16408T0/1-682 GW-------- ---------- ---------- ---------- ------VDFW BACU017220/1-865 PWKPIRLPVF SSLSLGLLPE RSATLMVYED VVQIVSGFQG ARPQPRVHFQ ENSTTRP00000004165/1-862 PWKPIRLPVF SSLSLGLLPE RSATLMVYED VVQIVSGFQG ARPQPRVHFQ 151 200 ENSP00000367356/1-890 RRALRLPENT SYSDLTAFLT AASSPSEVDS FPYLRGLDGN GTGNSTRHDL ENSBTAP00000032454/1-805 RRALRLPENT SYSDLTAFLT AASSPSEVDG FPYLRGLDGN GT-------- bmy_16408T0/1-682 KRG------- ---------K ACEVGTTVEG ----KVMDS- ---------- BACU017220/1-865 RRALRLPENT SYSDLTAFLT AAGSPSEVDG FPYLRGLDGN GTGNGTRYDL ENSTTRP00000004165/1-862 RRALRLPENT SYSDLTAFLT AAGSPSEVDG FPYLRGLDGN GTGNGTRYDL 201 250 ENSP00000367356/1-890 TPVTAVSVHL LSSNGTPVLV DGPIYVTVPL ATQSSLRHNA YVAAWRFDQK ENSBTAP00000032454/1-805 ---------- ---------- ---------- ---------- ---------- bmy_16408T0/1-682 ---------- ---------- ---------- ---------- ---------- BACU017220/1-865 TPVTAVSVHL LSNDGTPVLV DGPIYVTVPL ATQSSLRHNA YVTAWRFDQK ENSTTRP00000004165/1-862 TPVTAVSVHL LSNDGTPVLV DGPIYVTVPL ATQSSLRHNA YVTAWRFDQK 251 300 ENSP00000367356/1-890 LGTWLKSGLG LVHQEGSQLT WTYIAPQLGY WVAAMSPPIP GPVVTQDITT ENSBTAP00000032454/1-805 -GTWLKSGLG LVHQEGSQLT WTYIAPQLGY WVAAMSPPNP GPVVTQDITT bmy_16408T0/1-682 -GTWLKSGLG LVHQEGSQLT WTYIAPQLGY WVAAMSPPNP GPVVTQDIAT BACU017220/1-865 LGTWLKSGLG LVHQEGSQLT WTYIAPQLGY WVAAMSPPNP GPVVTQDIAT ENSTTRP00000004165/1-862 LGTWLKSGLG LVHQEGSQLT WTYIAPQLGY WVAAMSPPNP GPVVTQDIAT 301 350 ENSP00000367356/1-890 YHTVFLLAIL GGMAFILLVL LCLLLYYCRR KCLKPRQHHR KLQLPAGLES ENSBTAP00000032454/1-805 YHTVFLLAIL GGMAFILLVL LCLLLYYCRR KCLKPRQHHR KLQLPATLES bmy_16408T0/1-682 YHTVFLLAIL GGMAFILLVL LCLLLYYCRR KCLKPRQHHR KLQLPATLES BACU017220/1-865 YHTVFLLAIL GGMAFILLVL LCLLLYYCRR KCLKPRQHHR KLQLPATLES ENSTTRP00000004165/1-862 YHTVFLLAIL GGMAFILLVL LCLLLYYCRR KCLKPRQHHR KLQLPATLES 351 400 ENSP00000367356/1-890 SKRDQSTSMS HINLLFSRRA SEFPGPLSVT SHGR-PEAPG TKELMSGVHL ENSBTAP00000032454/1-805 SKRDQSTSMS HINLLFSRRE SEFPGPLSVT SQGRPPDAPG SKELMSGVHL bmy_16408T0/1-682 SKRDQSTSMS HINLLFSRRE SEFPGPLSVT SQGRPPDAPG SKELMSGVHL BACU017220/1-865 SKRDQSTSMS HINLLFSRRE SEFPGPLSVT SQGRPPDAPG SKELMSGVHL ENSTTRP00000004165/1-862 TKRDQSTSMS HINLLFSRRE SEFPGPLSVT SQGRPPDAPG SKELMSGVHL 401 450 ENSP00000367356/1-890 EMMSPGGEGD LHTPMLKLSY STSQEFSSRE ELLSCKEEDK SQISFDNLTP ENSBTAP00000032454/1-805 EMMSSNGEVD MHTPMLKLSY STSQEFSSRE ELLSHKEEDK SQISFDNLTP bmy_16408T0/1-682 EMMSSSGEVD MHTPMLKLSY STSQEFSSRE ELLSHKEEDK SQISFDNLTP BACU017220/1-865 EMMSSSGEVD MHTPMLKLSY STSQEFSSRE ELLSHKEEDK SQISFDNLTP ENSTTRP00000004165/1-862 EMMSSSGEVD MHTPMLKLSY STSQEFSSRE ELLSHKEEDK SQI-FDNLTP 451 500 ENSP00000367356/1-890 SGTLGKDYHK SVEVFPLKAR KSMEREGYES SGNDDYRGSY NTVLSQPLFE ENSBTAP00000032454/1-805 SGTLGKDYHK SVEIFPLKAR KPMEREGYES SGNSDYRRSY NAMLSQPLFE bmy_16408T0/1-682 SGTLGKDYRK SVEIFPLKAR KSVEREGYES PGNSDYRRNY NAMLSQPLFE BACU017220/1-865 SGTLGKDYRK SVEMFPLKAR KSVEREGYES PGNSDYRRNY NAMLSQPLFE ENSTTRP00000004165/1-862 SGTLGKDYCK SVEMFSLKAR KSVEREGYES PGNSDYRRNY NAMLSQPLFE 501 550 ENSP00000367356/1-890 KQDREGPA-- ---STGSKLT IQEHLYPAPS SPEKEQLLDR RPTECMMSRS ENSBTAP00000032454/1-805 KQDRESQASV THISTGSKLT IQEHMYPAPS SPEKDQLLER RPTECMMSRS bmy_16408T0/1-682 KQDRDGQASV THISTGSKLT IQEHMYPAPS SPEKDQLMER RPTECMMSRS BACU017220/1-865 KQDRDCQASV THISTGSKLT IQEHMYPAPS SPEKDQLMER RPTECMMSRS ENSTTRP00000004165/1-862 KQDRDGQASV THISTGSKLT IQEHMYPAPS SPEKDQLMER RPTECMMSRS 551 600 ENSP00000367356/1-890 VDHLERPTSF PRPGQLICCS SVDQVNDSVY RKVLPALVIP AHYMKLPGDH ENSBTAP00000032454/1-805 VDHLERPTSF PRPGQLICCS SVDQVNDSVY RKVLPALVIP AHYMKLPGDH bmy_16408T0/1-682 VDHLERPTSF PRPGQLICCS SVDQVNDSVY RKVLPALVIP AHYMKLPGDH BACU017220/1-865 VDHLERPTSF PRPGQLICCS SVDQVNDSVY RKVLPALVIP AHYMKLPGDH ENSTTRP00000004165/1-862 VDHLERPTSF PRPGQLICCS SVDQVNDSVY RKVLPALVIP AHYMKLPGDH 601 650 ENSP00000367356/1-890 SYVSQPLVVP ADQQLEIERL QAELSNPHAG IFPHPSSQIQ PQPLSSQAIS ENSBTAP00000032454/1-805 SYVGQPLVVP ADPQLEIERL QAELSSPHAG IFPHPSAQIQ AQPLSCQAIS bmy_16408T0/1-682 SYVGQPLVVP ADQQLEIERL QAELSSPHAG IFPHASSQIQ AQPLSCQAIS BACU017220/1-865 SYVGQPLVVP ADQQLEIERL QAELSSPHAG IFPHASSQIQ AQPLSCQAIS ENSTTRP00000004165/1-862 SYVGQPLVVP ADQQLEIERL QAELASPHAG IFPHASSQIQ AQPLSCQAIS 651 700 ENSP00000367356/1-890 QQHLQDAGTR EWSPQNASMS ESLSIPASLN DAALAQMNSE VQLLTEKALM ENSBTAP00000032454/1-805 QQHLQDTGAR EWTPQSASMS ESLSIPASLN DAALAQMNSE VQLLTEKALL bmy_16408T0/1-682 QQHLQDAGTR EWTPQNASMS ESLSIPASLN DAALAQMNSE VQLLTEKALL BACU017220/1-865 QQHLQDAGTR EWTPQNASMS ESLSIPASLN DAALAQMNSE VQLLTEKALL ENSTTRP00000004165/1-862 QQHLQDAGTR EWTPQNASMS ESLSIPASLN DAALAQMNSE VQLLTEKALL 701 750 ENSP00000367356/1-890 ELGGGKPLPH PRAWFVSLDG RSNAHVRHSY IDLQRAGRNG SNDASLDSGV ENSBTAP00000032454/1-805 ELGGGKP-PH PRAWFVSLDG RSNAHVRHSY IDLQRAGRNG SNDASLDSGV bmy_16408T0/1-682 ELGGGKPLPH PRAWFVSLDG RSNAHVRHSY IDLQRAGRNG SNDASLDSGV BACU017220/1-865 ELGGGKPLPH PRAWFVSLDG RSNAHVRHSY IDLQRAGRNG SNDASLDSGV ENSTTRP00000004165/1-862 ELGGGKPLPH PRAWFVSLDG RSNAHVRHSY IDLQRAGRN- SNDASLDSGV 751 800 ENSP00000367356/1-890 DMNEPKSARK GRGDALSLQQ NYPPVQEHQQ KEPRAPDSTA YTQLVYLDDV ENSBTAP00000032454/1-805 DMNEPKSARK GRGDPSTLPQ SHPPVQEHPQ KESRAADSSA YTQLVYLEDM bmy_16408T0/1-682 DMNEPKSARK GRGDPLPLPQ NHPPVPEHAQ KEPRAADSSA YTQLVYLDDT BACU017220/1-865 DMNEPKSARK GRGDPLPLPQ NHPPVPEHAQ KEPRAADSSA YTQLVYLDDT ENSTTRP00000004165/1-862 DMNEPKSARK GRGDPLSLPQ NRPPVQEHAQ KEPRAADSSA YTQLVYLDDM 801 850 ENSP00000367356/1-890 EQSGSECGTT VCTPEDSALR CLLEGSSRRS GGQLPSLQEE TTRRTADAPS ENSBTAP00000032454/1-805 DQSGSEGGTT AGTPEDSALR CLLDGSSRRS GGQLPSLQEE TTKRISDVAP bmy_16408T0/1-682 DQSGSEGGTA VGTPEDSALR CLLDGSSRRS GGQLPSLQEE TTKRTSDVPP BACU017220/1-865 DQSGSEGGTA VGTPEDSALR CLLDGSSRRS GGQLPSLQEE TTKRTSDVPP ENSTTRP00000004165/1-862 DQSGSEGGTA VGTPEDSALR CLLDGSSRRS GGQLPSLQEE TTKRTSDVPP 851 900 ENSP00000367356/1-890 EPAASPHQRR SAHEEEE--D DDDDDQGEDK KSPWQKREER PLMAFNIK ENSBTAP00000032454/1-805 EPAASPDQRR SAPQDEE-DD EDDDDQGEDK KSPWQKREER PLMAFNIK bmy_16408T0/1-682 APSASPDKRR SAQEDEDDDD DDDDDQGEGK KSPWQKREER PLMAFNIK BACU017220/1-865 APSASPDKRR SAQEDEDEDD DDDDDQGEGK KSPWQKREER PLMAFNIK ENSTTRP00000004165/1-862 APSASPDKRR SAQEDED-DE DDDDDQGEGK KSPWQKREER PLMAFNIK