KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:05 2014 Check: 00 .. Name: ENSP00000354152/1-383 Len: 404 Check: 6015 Weight: 1.00 Name: ENSBTAP00000032495/1-380 Len: 404 Check: 1625 Weight: 1.00 Name: ENSTTRP00000005581/1-367 Len: 404 Check: 6253 Weight: 1.00 Name: bmy_06749T0/1-222 Len: 404 Check: 5386 Weight: 1.00 Name: BACU004316/1-366 Len: 404 Check: 7013 Weight: 1.00 // 1 50 ENSP00000354152/1-383 MEPRAVGVSK QDIREQIWGY MESQNLADFP RPVHHRIPNF KGSYLACQNI ENSBTAP00000032495/1-380 MEPRA-GVSK QDIREQIWDY MESQNLADFP RPVHHRIPNF KGASRAAEHF ENSTTRP00000005581/1-367 MEPRA-GVSK QDIREQIWDY MEARNLADFP RPVHHRIPNF KGSYLACQNI bmy_06749T0/1-222 ---------- ---------- ---------- ---------- ---------- BACU004316/1-366 -MARTIKVNP DAPQK----- ---------- ---NARFFVL DGSYLACQNI 51 100 ENSP00000354152/1-383 KDLDVFARTQ EVKVDPDKPL EGVRLLVLQS KKTLLVPTPR LRTGLFNKIT ENSBTAP00000032495/1-380 PRLQAFKMAR TIKVNPDAPQ KNARFFVLES KKTLLVPTPR LRTGLFNKIT ENSTTRP00000005581/1-367 KDLAVFARTQ EVKVDPDKPL EGVRLLALQS KKTLLVPTPR LRTGLFNKIT bmy_06749T0/1-222 ---------- ---------- ---------- ---------- ---------- BACU004316/1-366 KDLEVFARTQ EVKVDPDKPL EGVRLLALQS KKTLLVPTPR LRTGLFNKIT 101 150 ENSP00000354152/1-383 PPPGATKDIL RKCATSQGVR NYSVPIGLDS RVLVDLVVVG SVAVSEKGWR ENSBTAP00000032495/1-380 PPPGATKDIL RKCATSQGVR NYSTPVGLDS KVLVDLVVVG SVAVSEKGWR ENSTTRP00000005581/1-367 PPPGATKDIL RKCATSQGVR NYSTPVGLDS RVLVDLVVVG SVAVSEKGWR bmy_06749T0/1-222 ---------- ---------- ---------- ---------- ---------- BACU004316/1-366 PPPGATKDIL RKCATSQGVR NYSTPVGLDS MVLVDLVVVG SVAVSEKGWR 151 200 ENSP00000354152/1-383 IGKGEGYADL EYAMMVSMGA VSKETPVVTI VHDCQVVDIP EELVEEHDIT ENSBTAP00000032495/1-380 IGKGEGYADL EYAMMVSMGA VSQGTPVVTI VHDCQVVDIP EALLEDHDLT ENSTTRP00000005581/1-367 IGKGEGYADL EYAMMVSMGA VSQGTPVVTI VHDCQVVDIP ETLLEDHDLT bmy_06749T0/1-222 ---------- ---MMVSMGA VSQGTPVVTI VHDCQVVDIP ETLLEDHDLT BACU004316/1-366 IGKGEGYADL EYAMMVSMGA VSQGTPVVTI VHDCQVVDIP ETLLEDHDLT 201 250 ENSP00000354152/1-383 VDYILTPTRV IATGCKRPKP MGITWFKISL EMMEKIPILR SLRAREQQAG ENSBTAP00000032495/1-380 VDYILTPTRV ITTGCERPKP AGIAWSKISC EMLGKMPILR SLRHQEEQAG ENSTTRP00000005581/1-367 VDYILTPTRV ITTGCERPKP TGIVWSKISC EMMGKMPVLR SLRCREEQAG bmy_06749T0/1-222 VDYILTPTRV VTTGCARPKP AGIVWSKISC EVMGKMPVLR SLRCREEQAG BACU004316/1-366 VDYILTPTRV VTTGCARPKP AGIVWSKISC EMMGKIPVLR SLRCREEQAG 251 300 ENSP00000354152/1-383 KDVTLQGEHQ HLPEPGCQQT VPLSVGRRPP DTPGPETNSM EAAPGSPPGE ENSBTAP00000032495/1-380 KDVTLRDGPR SP--PGA--- -----TRSPR DLAPPEL--- ----GS---- ENSTTRP00000005581/1-367 KDVTLRDTHQ GLPCPGR--- --LSTVRSPR ELPSLES--- ----GSWQGD bmy_06749T0/1-222 KDVTLRDKHR SL--PGARAA --LSTVRSPR ELPSLES--- ----GSVPGE BACU004316/1-366 KDVTLRDKHR SL--PGARAA --LSTVRSPW ELPSLES--- ----GSVPGE 301 350 ENSP00000354152/1-383 GAPLAADVYV GNLPGDARVS DLKRALRELG SVPLRLTWQG PRRRAFLHYP ENSBTAP00000032495/1-380 -VPLSS-VQI GNLPRDARVS ELKRALSALG VAPSRLTWQG PQHGAFLHYR ENSTTRP00000005581/1-367 DVPT---VYI GNLPRDARVS ELKRALSARG AAPSRLTWQG PQRGAFLHYR bmy_06749T0/1-222 DVPSST-VYV GNLPRDARVS ELKRALSARG AAPSRLTWQG PQRGAFLHYR BACU004316/1-366 DVPSST-VDV GNLPRDARVS ELKRALSARG AAPSRLTWQG PQRGAFLHYR 351 400 ENSP00000354152/1-383 DSAAAQQAVS CLQGLRLGTD TLRVALARQQ RDK------- ---------- ENSBTAP00000032495/1-380 DPAEAQQAIA CLQGFRLGAN TVRVVLARQQ RASDLVGSHT AEPLPDHQPA ENSTTRP00000005581/1-367 DPAEAWQAIS RLQGFCLGAN TVRVALARHQ GQW------- ---------- bmy_06749T0/1-222 DPAEAWQAIS RLQGFCLGAN TARVALARQQ GASGPAGGRA GEPHPDP--- BACU004316/1-366 DPAEAWQAIS RLQGFCLGAN TARVALARQQ GASGPAGGRA GEPHPDP--- 401 450 ENSP00000354152/1-383 ---- ENSBTAP00000032495/1-380 IAGP ENSTTRP00000005581/1-367 ---- bmy_06749T0/1-222 ---- BACU004316/1-366 ----