KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:06 2014 Check: 00 .. Name: ENSP00000299578/1-395 Len: 408 Check: 7952 Weight: 1.00 Name: ENSBTAP00000032506/1-392 Len: 408 Check: 5556 Weight: 1.00 Name: ENSTTRP00000007561/1-394 Len: 408 Check: 1380 Weight: 1.00 Name: bmy_11093T0/1-405 Len: 408 Check: 8659 Weight: 1.00 Name: BACU009727/1-407 Len: 408 Check: 7364 Weight: 1.00 // 1 50 ENSP00000299578/1-395 MDLCQKNETD LENAENNEIQ FTEETEPTYT CPDGKSEKNH VYCLLDVSDI ENSBTAP00000032506/1-392 MDFGHKNETE LENSENYEIE STEETELIYT CPDERSEKNH VCCLLNISDI ENSTTRP00000007561/1-394 MDLSLKNETE LENSENNEVQ STEETELNYT CPDERSEKNH VCCLLNISDI bmy_11093T0/1-405 MDLGPKNETE LEXSENTEIQ STEETELIYT CPBERSEKNH VCCLLNISDI BACU009727/1-407 MDLGPKNKTE LENSENTEIQ STEETELIYT CPDERSEKNH VCCLLNISDI 51 100 ENSP00000299578/1-395 TLEQDEKAKE FIIGTGWEEA VQGWGRTSPA ACIWPRKIPK KARVGEGACS ENSBTAP00000032506/1-392 TLEQDKKAKE FVIGTGWEEA VRGWGQISPT ACIWPRKKLK KARVGESASS ENSTTRP00000007561/1-394 TLEQDEEAKE FVIGTGWEEA VRGWGRISPT ACIWPRKKLK KAKMGESASS bmy_11093T0/1-405 TLEQDEEXKE FVIGTGWEEA VRGWGRISPT ACIWPRKKLK KAKMGESASS BACU009727/1-407 TLEQDEEAKE FVIGTGWEEA VRGWGRISPT ACIWPRKKLK KAKMGESASS 101 150 ENSP00000299578/1-395 DCLVCVNLSH WSLQTK---- ---------P PTEGGPEKDQ SSPSQTQAAP ENSBTAP00000032506/1-392 -CLLCVNLSH GSLEARPQS- ---------E GAEAGPEKDG GSLSQTPGIP ENSTTRP00000007561/1-394 -CLLCVSLSQ GSLEAR---- ---------P PAEAGPEKDG GSLSQTPGPP bmy_11093T0/1-405 -CLLCVSLSQ GSLEARLQSE AGKLEVGASA PAEAEPEKDG GSFSQTPGPP BACU009727/1-407 -CLLCVSLSR GSLEARLQSE AGKLESGASA PAEAGPEKDG GSLSLTLATP 151 200 ENSP00000299578/1-395 QGPSTASRAI SDICFPTYFR AEKKSLQIKE FIWCNKDWAI PGTNRGKASG ENSBTAP00000032506/1-392 PGSTTTSREV NKICFPTYSQ GEKKSLQIKE FIWCLEDWAT PETVRGKDPR ENSTTRP00000007561/1-394 PGPNTAYREV NRICFPTYSQ GEKKSLQIKE FIWCLEDWAT PEAVRGNDPG bmy_11093T0/1-405 PGPTSAYRXV NKICFPTYSQ GEKKSLQIKE FIWCLEDWAT PETVRVKDPG BACU009727/1-407 PGPTTAYQEV NKICFPTYSQ GEKKSLQINE FIWCLEDWAT PETVRGKDPG 201 250 ENSP00000299578/1-395 NPSGGAHRGL SIPGPLTSRA LLVLPPLKAS LSNALDVLGK KSKNSFLQSE ENSBTAP00000032506/1-392 RPWRGTDRIL PASDSLTSKA LLVLPPLKSS PPDGLDVLGK KTKNFFLRPE ENSTTRP00000007561/1-394 SPSGGADGSA SVADSLTSKA HLVLPALKSS PANGLDVPGK KSQNFFLQQE bmy_11093T0/1-405 SPS--ADGSA SVADSLTSKA LLVLPALKAS PPNGLDVTGK KSQNFFLQLE BACU009727/1-407 SPSGGTDGSA SVADSLTSKA LLVLPALKAS PANGLDVPAK KSQNFFLQLE 251 300 ENSP00000299578/1-395 EKVLDVEKDG CVAYAYGLKT ADGKGEKRAS ELAKHPMVND TPSSPSPAAQ ENSBTAP00000032506/1-392 EKGLSVEKDE CVAYAYGVKA VDGAGEKQPT ELARHHRVKD MQPFLTPVAR ENSTTRP00000007561/1-394 EKGLSVAKDE QVACAYGVKT VDGTGEKRPI ELAKHHKVKE TQPFPTPAAR bmy_11093T0/1-405 EKGPSVVKDG RVACACGVKT VDGTGEKRPS ELAKHHRVKE TQPFPTPVAR BACU009727/1-407 EKGPSAAKDG RVACACGVKT VDGTGEKRPS ELAKHHRVKE TQPFPTPVAR 301 350 ENSP00000299578/1-395 ISLLTDPEQR CLHWSLLSEK NLACPPDPSN VRYLAALQLL QKRGVQSYKS ENSBTAP00000032506/1-392 TPLLPEPEPC CLHWSRLPEK NLLCPP---- -CYLATFQLL QKQGARNYKA ENSTTRP00000007561/1-394 TSLLAGPEPC CLPWSLLPEK HLVCPPHHNS VRYLATLQLV EKQGAQTYKA bmy_11093T0/1-405 TSLLAAPEPC CLPWSLLPEK HVVCPPQHNS VRYLATLQLV QKQGAQTDKA BACU009727/1-407 TSLLAGPEPC CLPWSLLPEK HLVCPPQHSS VRYLATLQLV QKQGAQNYKA 351 400 ENSP00000299578/1-395 KFKAKEPRSP VITRKHVLPK AKQENRPQML ETKVFPRPVL PSLTVSRVII ENSBTAP00000032506/1-392 RLKAREPRPP MKTPKRVLTE AKQENRPQML ETKVFSRPLL PSLTVSRVVI ENSTTRP00000007561/1-394 KFKAREPRPP MKTPHRVLTA AKPENRPQTL ETKVFSRPLL PSLTVSRVVM bmy_11093T0/1-405 KFKAREPRPP VKTPQRVLTA AKPANRPQTL ETKVLSRPLL PSLTVSRVVM BACU009727/1-407 KFKAREPRPP VKTPQRVLTA AKPANRPQTL ETKVLSRPLL PSLTVSRVVM 401 450 ENSP00000299578/1-395 PVSTHRIL ENSBTAP00000032506/1-392 PISTHRLL ENSTTRP00000007561/1-394 AVPTHRLL bmy_11093T0/1-405 AVPTHRLL BACU009727/1-407 AVPTHRLL