KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:07 2014 Check: 00 .. Name: ENSTTRP00000015368/1-522 Len: 524 Check: 2834 Weight: 1.00 Name: ENSP00000457230/1-414 Len: 524 Check: 6453 Weight: 1.00 Name: ENSBTAP00000032547/1-414 Len: 524 Check: 5576 Weight: 1.00 Name: BACU009738/1-225 Len: 524 Check: 958 Weight: 1.00 Name: bmy_11465T0/1-259 Len: 524 Check: 230 Weight: 1.00 // 1 50 ENSTTRP00000015368/1-522 MAALRYAGLD DTDSEDELPP GWEQRTTKDG WVYYANHTEE KTQWEHPKTG ENSP00000457230/1-414 MAALRYAGLD DTDSEDELPP GWEERTTKDG WVYYANHTEE KTQWEHPKTG ENSBTAP00000032547/1-414 MAALRYAGLD DTDSEDELPP GWEQRTTKDG WVYYANHTEE KTQWEHPKTG BACU009738/1-225 ---------- ---------- ---------- --------MT KLFFDPHSHG bmy_11465T0/1-259 ---------- ---------- ---------- ----MHAVPK RLLMDMYK-- 51 100 ENSTTRP00000015368/1-522 KRKRIAGDLP XXXXXXXXXX XXXXXXXHIN KRTTYLDPRL AFTVDDNPTK ENSP00000457230/1-414 KRKRVAGDLP YGWEQETDEN GQVFFVDHIN KRTTYLDPRL AFTVDDNPTK ENSBTAP00000032547/1-414 KRKRIAGDLP YGWEQETDEN GQVFFVDHIN KRTTYLDPRL AFTVDDNPTK BACU009738/1-225 HSKPVMLGLT FGDSQRTLEL RKTE------ ---------- ---------- bmy_11465T0/1-259 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000015368/1-522 PTTRQRYDSS TTAMEILQGR DFSGKVVVVT GANSGIGFET AKTFALHGAH ENSP00000457230/1-414 PTTRQRYDGS TTAMEILQGR DFTGKVVVVT GANSGIGFET AKSFALHGAH ENSBTAP00000032547/1-414 PTTRQRYDGS TTAMEILQGR DLSGKVVVVT GANSGIGFET AKSFALHGAH BACU009738/1-225 ---------- ---------- ---------- ---------- ---------- bmy_11465T0/1-259 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000015368/1-522 VILACRNMTR ANEAVSRILG EWHKAKVEAM TLDL-ALLHS VQHFAQAFKA ENSP00000457230/1-414 VILACRNMAR ASEAVSRILE EWHKAKVEAM TLDL-ALLRS VQHFAEAFKA ENSBTAP00000032547/1-414 VILACRNMTR ANEAVSRILG EWHKAKVEAM TLDL-ALLRS VQHFAQAFKA BACU009738/1-225 ---------- ---------- --ERALIGKE TYKMHEVFHC LSDLTMCLST bmy_11465T0/1-259 ---------- ---------- --HKXKVEAM TLDL-ALLHS VQHFAQAFKA 201 250 ENSTTRP00000015368/1-522 KNVSLHVLVC NAAVFALPWS LTKDGLETTF QVNHLGHFYL VQLLQDVLCR ENSP00000457230/1-414 KNVPLHVLVC NAATFALPWS LTKDGLETTF QVNHLGHFYL VQLLQDVLCR ENSBTAP00000032547/1-414 KNVSLHVLVC NAAVFGLPWT LTKDGLETTF QVNHLGHFYL VQLLQDVLCR BACU009738/1-225 FPRSLHVLVC NAAVFALPWS LTKDGLETTF QVNHLGHFYL VQLLQDVLCR bmy_11465T0/1-259 KNVSLHVLVC NAAVFALPWS LTKDGLETTF QVNHLGHFYL VQLLQDVLCR 251 300 ENSTTRP00000015368/1-522 SAPARVVVVS SESHRFTDIN DSSGKLDFSR LSPSKNDYWA MLAYNRSKLC ENSP00000457230/1-414 SAPARVIVVS SESHRFTDIN DSLGKLDFSR LSPTKNDYWA MLAYNRSKLC ENSBTAP00000032547/1-414 SAPARVVVVS SESHRFTDIN DSSGKLDFSR LSPSKNDYWA MLAYNRSKLC BACU009738/1-225 SAPARVVVVS SESHRFTDIN DSSGKLDFSR LSPSKNDYWA MLAYNRSKLC bmy_11465T0/1-259 SAPARVVVVS SESHRFTDIN DSSGKLDFSR LSPSKNDYWA MLAYNRSKLC 301 350 ENSTTRP00000015368/1-522 NILFSSELHR RLSPRGVTSN AVHPGNMMYS SLHRGWWVYT LLFTLARPFT ENSP00000457230/1-414 NILFSNELHR RLSPRGVTSN AVHPGNMMYS NIHRSWWVYT LLFTLARPFT ENSBTAP00000032547/1-414 NILFSNELHR RLSPRGVTSN AVHPGNMMYS ALHRGWWVYT LLFTLARPFT BACU009738/1-225 NILFSSELHR RLSPRGVTSN AVHPGNMMYS SLHRGWWVYT LLFTLARPFT bmy_11465T0/1-259 NILFSSELHR RLSPRGVTSN AVHPGNMMYS SLHRGWWVYT LLFTLARPFT 351 400 ENSTTRP00000015368/1-522 KSMQQGAATT VCRRSRTGGS GRDVLQQLLP LHALDGSPER RHGPGPVGAQ ENSP00000457230/1-414 KSMQQGAATT VYC------- ---------- ---------- ---------- ENSBTAP00000032547/1-414 KSMQQGAATT VYC------- ---------- ---------- ---------- BACU009738/1-225 KSM------- ---------- ---------- ---------- ---------- bmy_11465T0/1-259 KSMVSELPPS ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000015368/1-522 READPGRTWQ PVRLSGARQG SAHTPTTRER SGVTASAGPL PNVPPTQIRS ENSP00000457230/1-414 ---------- ---------- ---------- ---------- AAVPELEGLG ENSBTAP00000032547/1-414 ---------- ---------- ---------- ---------- AVAPELEGLG BACU009738/1-225 ---------- ---------- ---------- ---------- DQQPNHRV-- bmy_11465T0/1-259 ---------- ---------- ---------- ---------- PQTPPARLYG 451 500 ENSTTRP00000015368/1-522 QGYKSRHNRA RNVRDHWEAG SSG-GKGIIR LFWGWGRPGS LCSLVMACLK ENSP00000457230/1-414 GMYFNNCCRC MPSPEAQSEE TA-------R TLWALSE--- ---------- ENSBTAP00000032547/1-414 GMYFNSCCRC LPSAEAQSED SA-------R ALWALSE--- ---------- BACU009738/1-225 ---------- ---------- ---------- ---------- ---------- bmy_11465T0/1-259 KGPRETQAHV LSAPLTFCED ESGLGHHSIR PVRALGH--- ---------- 501 550 ENSTTRP00000015368/1-522 VKLSCSRFLV SRKHEQFSRC RTAW ENSP00000457230/1-414 ------RLIQ ERLGSQSG-- ---- ENSBTAP00000032547/1-414 ------RLLQ GVPGGPPS-- ---- BACU009738/1-225 ---------- ---------- ---- bmy_11465T0/1-259 ------ISVD FRLHLLL--- ----