KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:42:10 2014 Check: 00 .. Name: ENSTTRP00000013359/1-324 Len: 392 Check: 2336 Weight: 1.00 Name: bmy_05372T0/1-380 Len: 392 Check: 8008 Weight: 1.00 Name: ENSP00000263610/1-327 Len: 392 Check: 1506 Weight: 1.00 Name: ENSBTAP00000032586/1-337 Len: 392 Check: 5191 Weight: 1.00 // 1 50 ENSTTRP00000013359/1-324 MEGSNGFGID SILSHRAGSP ALPKGDPLLG DCRSPLELSP RSESSSDCSS bmy_05372T0/1-380 MEGSNGFGID SILSHRAGSP ALPKGDPLLG DCRSPLELSP RLE--SDCSS ENSP00000263610/1-327 MEGSNGFGID SILSHRAGSP ALPKGDPLLG DCRSPLELSP RSESSSDCSS ENSBTAP00000032586/1-337 MEGSNGFGID SILSHRAGSP ALPKGDPLLG DCRSPLELSP RSESSSDCSS 51 100 ENSTTRP00000013359/1-324 PASPGRDCLE TGAPRPGGAS GPGLDSHLQP GQLSAPAQSR TVTSSFLIRD bmy_05372T0/1-380 PASPGRDCLE TGAPRPGGAS GPGLDSHLQP GQLSAPAQSR TVSSSFLIRD ENSP00000263610/1-327 PASPGRDCLE TGTPRPGGAS GPGLDSHLQP GQLSAPAQSR TVTSSFLIRD ENSBTAP00000032586/1-337 PASPGRDCLE TGAPRPGGAS GPGLDSHLQP GQLSAPAQSR TVTSSFLIRD 101 150 ENSTTRP00000013359/1-324 ILADCKPLAA CAPYSSSGQP AAPEPGGRLA AKAGEDFREK LDRSSSNASS bmy_05372T0/1-380 ILADCKPLAA CAPYSSSGQP ATPEPGGRLA AKAGEDFREK LDKSSSNASS ENSP00000263610/1-327 ILADCKPLAA CAPYSSSGQP AAPEPGGRLA AKAAEDFRDK LDKSGSNASS ENSBTAP00000032586/1-337 ILADCKPLAA CAPYSSSGQP AAPDPGGRLA AKPGEDFRDK LDKSGSNASS 151 200 ENSTTRP00000013359/1-324 DSEYK----- ------KEEG DREISSSRDS PPVRLKKPRK ARTAFTDHQL bmy_05372T0/1-380 DSEYK----- -----VKEEG DREISSSRDS PPVRLKKPRK ARTAFTDHQL ENSP00000263610/1-327 DSEYK----- -----VKEEG DREISSSRDS PPVRLKKPRK ARTAFTDHQL ENSBTAP00000032586/1-337 DSEYKVSFPS CLNQGVKEEG DREISSSRDS PPVRLKKPRK ARTAFTDHQL 201 250 ENSTTRP00000013359/1-324 AQLERSFERQ KYLSVQDRME LAASLNLTDT QVKTWYQNRR T-WKPQTDVG bmy_05372T0/1-380 AQLERSFERQ KYLSVQDRME LAASLNLTDT QVKTWYQNRR TKWKRQTAVG ENSP00000263610/1-327 AQLERSFERQ KYLSVQDRME LAASLNLTDT QVKTWYQNRR TKWKRQTAVG ENSBTAP00000032586/1-337 AQLERSFERQ KYLSVQDRME LAASLNLTDT QVKTWYQNRR TKWKRQTAVG 251 300 ENSTTRP00000013359/1-324 LDLLA-ARNY STLLRMFPSA YFYPLILVSY LDPGAALYLY HGPEVPPHAL bmy_05372T0/1-380 LELLAEAGNY SALQRMFPSP YFYPQSLVSN LDPGAALYLY RGPSAPPPAL ENSP00000263610/1-327 LELLAEAGNY SALQRMFPSP YFYPQSLVSN LDPGAALYLY RGPSAPPPAL ENSBTAP00000032586/1-337 LELLAEAGNY SALQRMFPSP YFYPQSLVSN LDPGAALYLY RGPSAPPPAL 301 350 ENSTTRP00000013359/1-324 HKPLVPRILI IRLQGARKK- ---------- ---------- ---------- bmy_05372T0/1-380 QRPLVPRILI HGLQGASEXH QGSPTGSYQM SAACRATWRR QVLPAHPGCW ENSP00000263610/1-327 QRPLVPRILI HGLQGASEP- ---------- ---------- ---------- ENSBTAP00000032586/1-337 QRPLVPRILI HGLQGASEP- ---------- ---------- ---------- 351 400 ENSTTRP00000013359/1-324 ----PPPLHT MAGILPRAAQ PR-------- ---------- -- bmy_05372T0/1-380 IPCTRPVLGP FRAALPGGEG SGRGVQIGPM SLRLLVQEID RP ENSP00000263610/1-327 ----PPPLPP LAGVLPRAAQ PR-------- ---------- -- ENSBTAP00000032586/1-337 ----PPPLPP LAGVLPRAAQ PR-------- ---------- --