KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:12 2014 Check: 00 .. Name: ENSTTRP00000014075/1-914 Len: 975 Check: 7321 Weight: 1.00 Name: bmy_16474T0/1-580 Len: 975 Check: 9790 Weight: 1.00 Name: BACU017808/1-953 Len: 975 Check: 8703 Weight: 1.00 Name: ENSBTAP00000032606/1-914 Len: 975 Check: 3288 Weight: 1.00 Name: ENSP00000376457/1-914 Len: 975 Check: 625 Weight: 1.00 // 1 50 ENSTTRP00000014075/1-914 ---------- ----MAENSA LTSTTGSTSL ADSSIFDSKV TETSKENLFI bmy_16474T0/1-580 MIAVDVCHCR RVQIMAENSA LTPTTGSTSL ADSSIFDSKV TETSKENLFI BACU017808/1-953 ---------- ----MAENSA LTPTTGSTSL ADSSIFDSKV TETSKENLFI ENSBTAP00000032606/1-914 ---------- ----MADDSA LASTTGSTSL ADSSIFDSKV AETSKENLFI ENSP00000376457/1-914 ---------- ----MAENSV LTSTTGRTSL ADSSIFDSKV TEISKENLLI 51 100 ENSTTRP00000014075/1-914 GSTSYVEEEM PQIETRIILV QEAGKQEELI KALKTIKIME VPVIKIKESC bmy_16474T0/1-580 GSTSYVEEEM PQIETRVILV QEAGKQEELI KALKTIKIME VPVIKIKESC BACU017808/1-953 GSTSYVEEEM PQIETRVILV QEAGKQEELT KALKTIKIME VPVIKIKESC ENSBTAP00000032606/1-914 RSTSCVEEEM PQIETRVILV QESGKQEELI RALKTINIME VPVIKIKESC ENSP00000376457/1-914 GSTSYVEEEM PQIETRVILV QEAGKQEELI KALKTIKIME VPVIKIKESC 101 150 ENSTTRP00000014075/1-914 PGKSDEKFIK SIVNMEIKVP FVKMESVEEF KSLDSPEFEN VFIVMDFQDS bmy_16474T0/1-580 PGKSDEKLIK SIVNMEIKVP LVKMESVEEL KSLDSPEFEN VFIVMDFQDS BACU017808/1-953 PGKSDEKLIK SIVNMEIKVP FVKMESVEEL KSLDSPEFEN VFIVTDFQDS ENSBTAP00000032606/1-914 PGKSDEKLIK SIVNMEIKLP FVKMESVEEF KSLDSPEFEN VFIVMDFQDS ENSP00000376457/1-914 PGKSDEKLIK SVINMDIKVG FVKMESVEEF EGLDSPEFEN VFVVTDFQDS 151 200 ENSTTRP00000014075/1-914 VFNELYKTDC RVIGPPVVLN YAQKGEPLPF SCRPLYCTSM MNLVLCFTGF bmy_16474T0/1-580 VFNELYRTDC RVIGPPVVLN CAQKGE---- ---------- ---------- BACU017808/1-953 VFNELYKTDC RVIGPPVVLN CAQKGEPLPF SCRPLYCTSM MNLVLCFTGF ENSBTAP00000032606/1-914 VFNELYKADC RVIGPPVVLN CAEKGEPLPF SCRPLYCTSM MNLVLCFTGF ENSP00000376457/1-914 VFNDLYKADC RVIGPPVVLN CSQKGEPLPF SCRPLYCTSM MNLVLCFTGF 201 250 ENSTTRP00000014075/1-914 RKKEELVRLV TLVHHMGGVI RKDFNSKVTH LVANCTQGEK FRIAVSLGTP bmy_16474T0/1-580 ------VRLV TLVHHMGGVI RKDFNSKVTH LVANCTQGEK FRIAVSLGTP BACU017808/1-953 RKKEELVRLV TLVHHMGGVI RKDFNSKVTH LVANCTQGEK FRIAVSLGTP ENSBTAP00000032606/1-914 RKKEELARLV TLVHHMGGVI RKDFNSKVTH LVANCTQGEK FRVAVSLGTP ENSP00000376457/1-914 RKKEELVRLV TLVHHMGGVI RKDFNSKVTH LVANCTQGEK FRVAVSLGTP 251 300 ENSTTRP00000014075/1-914 IMKPEWIYKA WERRNEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_16474T0/1-580 IMKPEWIYKA WERRNEQDFC ASFDEFRNEF KVPPFQDCIL SFLGFSDEEK BACU017808/1-953 IMKPEWIYKA WERRNEQDFC ASFDEFRNEF KVPPFQDCIL SFLGFSDEEK ENSBTAP00000032606/1-914 IMKPEWIHKA WERRNEQDFC ASVDDFRNEF KVPPFQDCIL SFLGFSDEEK ENSP00000376457/1-914 IMKPEWIYKA WERRNEQDFY AAVDDFRNEF KVPPFQDCIL SFLGFSDEEK 301 350 ENSTTRP00000014075/1-914 XXXXXXXXXX XGNYLPVGDE RCTHLIVEEN IVKELPFEPS KKLYVVKQE- bmy_16474T0/1-580 TNMEEMTEMQ GGNYLPVGDE RCTHLIVEES IVKELPFEPS KKLYVVKQEA BACU017808/1-953 TNMEEMTEMQ GGNYLPVGDE RCTHLIVEEN IVKELPFEPS KKLYVVKQE- ENSBTAP00000032606/1-914 TNMEEMTKMQ GGNCLPVGDE RCTHLIVEEN IVKELPFEPS KKLYVVKQE- ENSP00000376457/1-914 TNMEEMTEMQ GGKYLPLGDE RCTHLVVEEN IVKDLPFEPS KKLYVVKQE- 351 400 ENSTTRP00000014075/1-914 -------WFW GSIQMDARAG ETMYLYEKAN TPELKKSVSL LSLNTPNSNR bmy_16474T0/1-580 SNSRMRLWFW GSIQMDARAG ETMYLYEKAN TPELKKSVSL LSLNTPNSNR BACU017808/1-953 -------WFW GSIQMDARAG ETMYLYEKAN TPELKKSVSL LSLNTPNSNR ENSBTAP00000032606/1-914 -------WFW GSIQMDARAG ETMYLYEKAN TPELKKSVSL LSLNTPNSNR ENSP00000376457/1-914 -------WFW GSIQMDARAG ETMYLYEKAN TPELKKSVSM LSLNTPNSNR 401 450 ENSTTRP00000014075/1-914 KRRRLKETLA QLSRETDMSP FPPRKRPSAE HSLSIGSLLD ISNTPESSIN bmy_16474T0/1-580 KRRRLKETLA QLSRETDMSP FPPRKRPSAE HSLSIGSLLD ISNTPESSIN BACU017808/1-953 KRRRLKETLA QLSRETDMSP FPPRKRPSAE HSLSIGSLLD ISNTPESSIN ENSBTAP00000032606/1-914 KRRRLKETLA QLSREADLSP FPPRKRPSAE HSLSIGSLLD ISNTPESSIN ENSP00000376457/1-914 KRRRLKETLA QLSRETDVSP FPPRKRPSAE HSLSIGSLLD ISNTPESSIN 451 500 ENSTTRP00000014075/1-914 YGETPKSCTK SSKNSTPVPS KQSARWQVAR ELYQTESNYV NILATIIQLF bmy_16474T0/1-580 YGETPKSCTK SSKNSTPVPS KQSARWQVAR ELYQTESNYV NILATIIQLF BACU017808/1-953 YGETPKSCTK SSKNSTPVPS KQSARWQVAR ELYQTESNYV NILATIIQLF ENSBTAP00000032606/1-914 YGETPKSCTK SSKNSTPVPS KQSARWQVAK ELYQTESNYV NILATIIQLF ENSP00000376457/1-914 YGDTPKSCTK SSKSSTPVPS KQSARWQVAK ELYQTESNYV NILATIIQLF 501 550 ENSTTRP00000014075/1-914 QVPLEEEGQR GGPILAPEEI KTIFGSIPDI FDVHTKIKDD LEDLIVNWDE bmy_16474T0/1-580 QVPLEEEGQR GGPILAPEEI KTIFGSIPDI FDVHTKIK-- ---------- BACU017808/1-953 QVPLEEEGQR GGPILAPEEI KTIFGSIPDI FDVHTKIKDD LEDLIVNWDE ENSBTAP00000032606/1-914 QVPLEEEGQR GGPILAPEEI KTIFGSIPDI FDVHTKIKDD LEDLIVNWDE ENSP00000376457/1-914 QVPLEEEGQR GGPILAPEEI KTIFGSIPDI FDVHTKIKDD LEDLIVNWDE 551 600 ENSTTRP00000014075/1-914 SKSIGDIFLK YSKDLVKTYP PFVNFFEMSK ETIIKCEKQK PRFHAFLKIN bmy_16474T0/1-580 ---------- -SKDLVKTYP PFVNFFEMSK ETIIKCEKQK PRFHAFLKRK BACU017808/1-953 SKSIGDIFLK YSKDLVKTYP PFVNFFEMSK ETIIKCEKQK PRFHAFLKIN ENSBTAP00000032606/1-914 SKSIGDIFLK YSKDLVKIYP PFVNFFEMSK ETIIKCEKQK PRFHAFLKIN ENSP00000376457/1-914 SKSIGDIFLK YSKDLVKTYP PFVNFFEMSK ETIIKCEKQK PRFHAFLKIN 601 650 ENSTTRP00000014075/1-914 QAKPECGRQS LVELLIRPVQ RLPSVALLLN DLKKHTAEEN PDKSTLEKAI bmy_16474T0/1-580 H--------- ---------- ------FIIT DLKKHTAEEN PDKSTLEKAI BACU017808/1-953 QAKPECGRQS LVELLIRPVQ RLPSVALLLN DLKKHTAEEN PDKSTLEKAI ENSBTAP00000032606/1-914 QAKPECGRQS LVELLIRPVQ RLPSIALLLN DLKKHTFEEN PDKSTLEKAI ENSP00000376457/1-914 QAKPECGRQS LVELLIRPVQ RLPSVALLLN DLKKHTADEN PDKSTLEKAI 651 700 ENSTTRP00000014075/1-914 GSLKEVMTXX XXXXXXXXXX XXXXXXXXXX XXXXANLLSS HRSLVQRVET bmy_16474T0/1-580 GSLKEVMT-- ---------- ---------- ---------- ---------- BACU017808/1-953 GSLKEVMTHI NEDKRKTEAQ KQIFDVVYEV DGCPANLLSS HRSLVQRVET ENSBTAP00000032606/1-914 ESLKEVMTHI NEDKRKTEAQ RQIFDVVYEV DGCPANLLSS HRSLVQRVET ENSP00000376457/1-914 GSLKEVMTHI NEDKRKTEAQ KQIFDVVYEV DGCPANLLSS HRSLVQRVET 701 750 ENSTTRP00000014075/1-914 ISLGEHPCDR GEQVTLFLFN DCLEIARKRH KVIGTFRSPH GQTRPPASLK bmy_16474T0/1-580 ---------- ---------- ---------- ---------- ---------- BACU017808/1-953 VSLGEHPCDR GEQVTLFLFN DCLEIARKRH KVIGTFRSPH GQTRPPASLK ENSBTAP00000032606/1-914 ISLGEHPCDR GEQVTLFLFN DCLEIARKRH KVIGTFRSPH GQTRPPASLK ENSP00000376457/1-914 ISLGEHPCDR GEQVTLFLFN DCLEIARKRH KVIGTFRSPH GQTRPPASLK 751 800 ENSTTRP00000014075/1-914 HIHLMPLSQI KKVLDIRETE DCHNAFALLV RPPTEQANVL LSFQMTSEEP bmy_16474T0/1-580 ---------- ---------- ---------- ---------- ---------- BACU017808/1-953 HIHLMPLSQI KKVLDIRETE DCHNAFALLV RPPTEQANVL LSFQMTSEEL ENSBTAP00000032606/1-914 HIHLMPLSQI KKVLDIRETE DCHNAFALLV RPPTEQANVL LSFQMTSEEL ENSP00000376457/1-914 HIHLMPLSQI KKVLDIRETE DCHNAFALLV RPPTEQANVL LSFQMTSDEL 801 850 ENSTTRP00000014075/1-914 PKENWLKMLC RHVANTICKA DAENLIYTAD PESFEVNTKD MDSTLSRASR bmy_16474T0/1-580 ---------- ---------- ---------- ---------- ---------- BACU017808/1-953 PKENWLKMLC RHVANTICKA DAENLIYTAD PESFEVNTKD MDSTLSRASR ENSBTAP00000032606/1-914 PKENWLKMLC RHVANTICKA DAENLIYTAD PESFEVNTKD MDSTLSRASR ENSP00000376457/1-914 PKENWLKMLC RHVANTICKA DAENLIYTAD PESFEVNTKD MDSTLSRASR 851 900 ENSTTRP00000014075/1-914 AIKKTSKKVT RAFSFSKTPK RALRRALMTS QSSVEGRSPS SNDKHVMSRL bmy_16474T0/1-580 ---------- ---------- ---------- ---------- ---------- BACU017808/1-953 AIKKTSKKVT RAFSFSKTPK RALRRALMTS QSSVEGRSPS SNDKHVMSRL ENSBTAP00000032606/1-914 AIKKTSKKVT RAFSFSKTPK RALRRALMAS QSSAEGRSPS SNEKHVMSRL ENSP00000376457/1-914 AIKKTSKKVT RAFSFSKTPK RALRRALMTS HGSVEGRSPS SNDKHVMSRL 901 950 ENSTTRP00000014075/1-914 SSTSSLAGIP SPSLVSLPSF ---------- ---------- FERRSHTLSR bmy_16474T0/1-580 ---------- ---------- ---------- ---------- ---------- BACU017808/1-953 SSTSSLAITH SVSTSTIIGF TKHGYVQRSN STGGRSQNSW FRSIRHSASR ENSBTAP00000032606/1-914 ASTSSLAGIP SPSLVSLPAF ---------- ---------- FERRSHTLSR ENSP00000376457/1-914 SSTSSLAGIP SPSLVSLPSF ---------- ---------- FERRSHTLSR 951 1000 ENSTTRP00000014075/1-914 STTHLI---- ---------- ----- bmy_16474T0/1-580 ---------- ---------- ----- BACU017808/1-953 ASFSEMLEGN TEFSNFKKKF YPSHL ENSBTAP00000032606/1-914 STTHLI---- ---------- ----- ENSP00000376457/1-914 STTHLI---- ---------- -----