KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:13 2014 Check: 00 .. Name: ENSBTAP00000032642/1-324 Len: 324 Check: 9535 Weight: 1.00 Name: ENSP00000377036/1-323 Len: 324 Check: 5640 Weight: 1.00 Name: ENSTTRP00000012882/1-280 Len: 324 Check: 3770 Weight: 1.00 Name: bmy_08593T0/1-323 Len: 324 Check: 5877 Weight: 1.00 Name: BACU016230/1-288 Len: 324 Check: 665 Weight: 1.00 // 1 50 ENSBTAP00000032642/1-324 MAEGERQTPS DSSEDAPPTT QNFIIPKKEI HTVPDMGKWK RSQAYADYIG ENSP00000377036/1-323 MAEGERQPPP DSSEEAPPAT QNFIIPKKEI HTVPDMGKWK RSQAYADYIG ENSTTRP00000012882/1-280 ---------- ---------- ---------- ---------- ---AYADYIG bmy_08593T0/1-323 MAEGERRSPP DSSEDIPPAT QNFIIPKKEI HTVPDMGKWK RSQAYADYIG BACU016230/1-288 ---------- ---------- ---------- -----MGKWK RSQAYADYIG 51 100 ENSBTAP00000032642/1-324 FILTLNEGVK GKKLSFEYKV SEAIEKLVAL LNTLDRWIDE TPPVDQPSRF ENSP00000377036/1-323 FILTLNEGVK GKKLTFEYRV SEAIEKLVAL LNTLDRWIDE TPPVDQPSRF ENSTTRP00000012882/1-280 FILTLNEGVK GKKLSFEYRV SEAIEKLVAL LNTLDRWIDE TPPVDQPSRF bmy_08593T0/1-323 FILTLNEGVK GKKLSFEYRV SEAIEKLVAL LNTLDRWIDE TPPVDQPSRF BACU016230/1-288 FILTLNEGVK GKKLSVEYRV SEAIEKLVAL LNTLDRWIDE TPPVDQPSRF 101 150 ENSBTAP00000032642/1-324 GNKAYRTWYA KLDQEAENLV ATVVPTNLAA AVPEVAVYLK ESVGNSTRID ENSP00000377036/1-323 GNKAYRTWYA KLDEEAENLV ATVVPTHLAA AVPEVAVYLK ESVGNSTRID ENSTTRP00000012882/1-280 GNKAYRTWYA KLDEEAENLV ATVVPTHLAA AVPEVAVYLK ESVGNSTRID bmy_08593T0/1-323 GNKAYRTWYA KLDEEAENLV ATVVPTHLAA AVPEVAVYLK ESVGNSTRID BACU016230/1-288 GNKAYRTWYA KLDEEAENLV ATVVPTHLAA AVPEVAVYLK ESVGNSTRID 151 200 ENSBTAP00000032642/1-324 YGTGHEAAFA AFLCCLCKIG VLRVDDQIAI VFKVFNRYLE VMRKLQKTYR ENSP00000377036/1-323 YGTGHEAAFA AFLCCLCKIG VLRVDDQIAI VFKVFNRYLE VMRKLQKTYR ENSTTRP00000012882/1-280 YGTGHEAAFA AFLCCLCKIG VLRVDDQIAI VFKVFNRYLE VMRKLQKTYR bmy_08593T0/1-323 YGTGHEAAFA AFLCCLCKIG VLRVDDQIAI VFKVFNRYLE VMRKLQKTYR BACU016230/1-288 YGTGHEAAFA AFLCCLCKIG VLRVDDQIAI VFKVFNRYLE VMRKLQKTYR 201 250 ENSBTAP00000032642/1-324 MEPAGSQGVW GLDDFQFLPF IWGSSQLIDH PYLEPRHFVD EKAVNENHKD ENSP00000377036/1-323 MEPAGSQGVW GLDDFQFLPF IWGSSQLIDH PYLEPRHFVD EKAVNENHKD ENSTTRP00000012882/1-280 MEPAGSQGVW GLDDFQFLPF IWGSSQLIDH PCLEPRHFVD EKAVNECHKD bmy_08593T0/1-323 MEPAGSQGVW GLDDFQFLPF IWGSSQLIDH PNLEPRHFVD EKAVNENHKD BACU016230/1-288 MEPAGSQGVW GLDDFQFLPF IWGSSQLIDH PNLEPRHFVD EKAVNENHKD 251 300 ENSBTAP00000032642/1-324 YMFLECILFI TEMKTGPFAE HSNQLWNISA VPSWSKVNQG LIRMYKAECL ENSP00000377036/1-323 YMFLECILFI TEMKTGPFAE HSNQLWNISA VPSWSKVNQG LIRMYKAECL ENSTTRP00000012882/1-280 YMFLECVLFI TEMKTGPFAE HSNQLWNISA VPSWSKVNQG LIRMYKAECL bmy_08593T0/1-323 YMFLECILFI TEMKTGPFAE HSNQLWNISA VPSWSKVNQG LIRMYKAECL BACU016230/1-288 YMFLECILFI TEMKTGPFAE HSNQLWNISA VPSWSKVNQG LIRMYKAECL 301 350 ENSBTAP00000032642/1-324 EKFPVIQHFK FGSLLPIHPV MSSC ENSP00000377036/1-323 EKFPVIQHFK FGSLLPIHPV -TSG ENSTTRP00000012882/1-280 EKFPVIQHFK FGSLLPIHPV -TSC bmy_08593T0/1-323 EKFPVIQHFK FGSLLPIQPV -TSC BACU016230/1-288 EKFPVIQHFK FGSLLPIQPV -TSC