KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:22 2014 Check: 00 .. Name: ENSP00000365529/1-1215 Len: 1260 Check: 6414 Weight: 1.00 Name: ENSBTAP00000032818/1-1216 Len: 1260 Check: 1803 Weight: 1.00 Name: BACU013801/1-669 Len: 1260 Check: 3440 Weight: 1.00 Name: bmy_11035T0/1-620 Len: 1260 Check: 2634 Weight: 1.00 Name: ENSTTRP00000009485/1-1216 Len: 1260 Check: 9477 Weight: 1.00 // 1 50 ENSP00000365529/1-1215 MGAMAYPLLL CLLLAQLGLG AVGASRDPQG RPDSPRERTP KGKPHAQQPG ENSBTAP00000032818/1-1216 MGVMAYPFLF CLLLVHFGLG AIGASREAPS RPDPPRERTL RAKQHAQQPA BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 MGAMANPLLC CLLLVHLGLG AAGASRDPPS RTDSSREKTL RAKQHAQQPA 51 100 ENSP00000365529/1-1215 RASASDSSAP WSRSTDGTIL AQKLAEEVPM DVASYLYTGD SHQLKRANCS ENSBTAP00000032818/1-1216 RASASDPSAP WSRSTDGTIL AQKLAEEVPM DVASYLYTGD SHKLKRANCS BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 RASASDPSAP WSRSTDGTIL AQKIAEEVPM DVASYLYTGD SHQLKRANCS 101 150 ENSP00000365529/1-1215 GRYELAGLPG KWPALASAHP SLHRALDTLT HATNFLNVML QSNKSREQNL ENSBTAP00000032818/1-1216 SRYELAGLPG KSPALASSHP SLHGALDTLT HATNFLNMML QSNKSREQNL BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 SRYELAGLPG KSPALASSHP SLHGALDTLT HATNFLNMML QSNKSREQNS 151 200 ENSP00000365529/1-1215 QDDLDWYQAL VWSLLEGEPS ISRAAITFST DSLSAPAPQV FLQATREESR ENSBTAP00000032818/1-1216 QDDLEWYQAL VRSLLEGEPS ISRAAITFST ESLSAPAPQV FLQATREESR BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 QDDLEWYRAL VRSLLEGEPS ISRAAITFST ESLSAPAPQV FLQATREESR 201 250 ENSP00000365529/1-1215 ILLQDLSSSA PHLANATLET EWFHGLRRKW RPHLHRRGPN QGPRGLGHSW ENSBTAP00000032818/1-1216 ILLQDLSSSA HHLANATLET EWFHGLRRKW RTHLHRRGSN QGPRGLGHSW BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 ILLQDLSSSA HHLANATLET EWFHGLRRKW RTHLHRRGSN QGPRGLGHSW 251 300 ENSP00000365529/1-1215 RRKDGLGGDK SHFKWSPPYL ECENGSYKPG WLVTLSSAIY GLQPNLVPEF ENSBTAP00000032818/1-1216 RRRDGLSGDK SHVKWSPPYL ECENGSYKPG WLVTLSAAFY GLQPNLVPEF BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 RRRDGLSGDK SHVKWSPPYL ECENGSYKPG WLVTLSAAFY GLQPNLVPEF 301 350 ENSP00000365529/1-1215 RGVMKVDINL QKVDIDQCSS DGWFSGTHKC HLNNSECMPI KGLGFVLGAY ENSBTAP00000032818/1-1216 RGVMKVDINL QKVDIDQCSS DGWFSGTHKC HLNNSECMPI KGLGFVLGAY BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- MLNS------ ---------- ENSTTRP00000009485/1-1216 RGVMKVDINL QKVDIDQCSS DGWFSGTHKC HLNNSECMPI KGLGFVLGAY 351 400 ENSP00000365529/1-1215 ECICKAGFYH PGVLPVNNFR RRGPDQHISG STKDVSEEAY VCLPCREGCP ENSBTAP00000032818/1-1216 QCICKAGFYH PRDFSFNNFQ RRGPDHHFVE SAKDVSEEVH VCLPCSEGCP BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ------HF-- ---------- ---------- ENSTTRP00000009485/1-1216 QCICKAGFYH PRVFSVNSFQ RRGPDHHFAG NAMDVSEEAH VCLPCREGCP 401 450 ENSP00000365529/1-1215 FCADDSPCFV QEDKYLRLAI ISFQALCMLL DFVSMLVVYH FRKAKSIRAS ENSBTAP00000032818/1-1216 YCADDSPCFV QEDKYLRLAI ISFQALCMLL DFLSMLVVYR FRKAKSIRAS BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 YCADDSPCFV QEDKYLRLAI ISFQALCVLL DCVSMLVLYR FRKAKSIRAS 451 500 ENSP00000365529/1-1215 GLILLETILF GSLLLYFPVV ILYFEPSTFR CILLRWARLL GFATVYGTVT ENSBTAP00000032818/1-1216 GLILLETILF GSLLLYFPVV ILYFEPSTFR CILLRWVRLL GFATVYGTVT BACU013801/1-669 ---------- ---------- ---------- ---------- ---------- bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 GLILLETILF GSLLLYFPVV ILYFEPSTFR CILLRWVRLL GFATVYGTVT 501 550 ENSP00000365529/1-1215 LKLHRVLKVF LSRTAQRIPY MTGGRVMRML AVILLVVFWF LIGWTSSVCQ ENSBTAP00000032818/1-1216 LKLHRVLKVF LSRTAQRIPY MTGGRVMRML AVILLVVFWF LVGWTSSVCQ BACU013801/1-669 ---------- ---------- MTGGRVMRML AVILLVVFWF LIGWTSSVCQ bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 LKLHRVLKVF LSRTAQRIPY MTGGRVMRML AVILLVVFWF LIGWTSSVCQ 551 600 ENSP00000365529/1-1215 NLEKQISLIG QGKTSDHLIF NMCLIDRWDY MTAVAEFLFL LWGVYLCYAV ENSBTAP00000032818/1-1216 NLERHISLIG QGRTSDHLIF SMCLVERWDY MTAAAEFLFL LWGVYLCYAV BACU013801/1-669 NLERQISLIG QGQTSDHLIF NMCLVERWDY MTAVGA---- ------EKGT bmy_11035T0/1-620 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009485/1-1216 NLERQISLIG QGQTSDHLIF NMCLVERWDY MTAVAEFLFL LWGVYLCYAV 601 650 ENSP00000365529/1-1215 RTVPSAFHEP RYMAVAVHNE LIISAIFHTI RFVLASRLQS DWMLMLYFAH ENSBTAP00000032818/1-1216 RTVPSAFHEP RYMAVAVHNE LIISAIFHTI RFVLASRLQS DWMLMLYFAH BACU013801/1-669 DILAPGVLVV KYIATSIFSM LL-------- RFVLASRLQS DWMLMLYFAH bmy_11035T0/1-620 ---------- ---------- ---------- RFVLASRLQS DWMLMLYFAH ENSTTRP00000009485/1-1216 RTVPSAFHEP RYMAVAVHNE LIISAIFHTI RFVLASRLQS DWMLMLYFAH 651 700 ENSP00000365529/1-1215 THLTVTVTIG LLLIPKFSHS SNNPRDDIAT EAYEDELDMG RSGSYLNSSI ENSBTAP00000032818/1-1216 THLTVTVTIG LLLIPKFSHS SNNPRDDIAT EAYEDELDMG RSGSYLNSSI BACU013801/1-669 THLTVTVTIG LLLIPKFSHS SNNPRDDIAT EAYEDELDMG RSGSYLNSSI bmy_11035T0/1-620 THLTVTVTIG LLLIPKFSHS SNNPRDDIAT EAYEDELDMG RSGSYLNSSI ENSTTRP00000009485/1-1216 THLTVTVTIG LLLIPKFSHS SNNPRDDIAT EAYEDELDMG RSGSYLNSSI 701 750 ENSP00000365529/1-1215 NSAWSEHSLD PEDIR----- ---------- ---------- ---------- ENSBTAP00000032818/1-1216 NSAWSEHSLD PEDIR----- ---------- ---------- ---------- BACU013801/1-669 NSAWSEHSLD PEDIR----- ---------- ---------- ---------- bmy_11035T0/1-620 NSAWSEHSLD PEDIRMLGRA PFIDFTLQLV ILAGRNAKFR TSLNLLLLRQ ENSTTRP00000009485/1-1216 NSAWSEHSLD PEDIR----- ---------- ---------- ---------- 751 800 ENSP00000365529/1-1215 DELKKLYAQL EIYKRKKMIT NNPHLQKKRC SKKGLGRSIM RRITEIPETV ENSBTAP00000032818/1-1216 DELKKLYAQL EIYKRKKMIT NNPHLQKKRC SKKGLGRSIM RRITEIPETV BACU013801/1-669 DELKKLYAQL EIYKRKKMIT NNPHLQKKRC SKKGLGRSIM RRITEIPETV bmy_11035T0/1-620 DELKKLYAQL EIYKRKKMIT NNPHLQKKRC SKKGLGRSIM RRITEIPETV ENSTTRP00000009485/1-1216 DELKKLYAQL EIYKRKKMIT NNPHLQKKRC SKKGLGRSIM RRITEIPETV 801 850 ENSP00000365529/1-1215 SRQCSKEDKE GADHGTAKGT ALIRKNPPES SGNTGKSKEE TLKNRVFSLK ENSBTAP00000032818/1-1216 SRQCSKEDKD GGEHGSAKGS SAGRKNPQET AGGSGKPKEE SLRSRVFSLK BACU013801/1-669 SRQCSKEDKD ALDHGAAKGA VPGRRNPQEA AGGAGKPKEE SLRNRVFSLK bmy_11035T0/1-620 SRQCSKEDKD ALDHGAAKGA VPGRRNPQEA AGGAGKPKEE SLRNRVFSLK ENSTTRP00000009485/1-1216 SRQCSKEDKD ALDHGAAKGA VPGRKNPQEA AGGAGKPKEE SLRNRVFSLK 851 900 ENSP00000365529/1-1215 KSHSTYDHVR DQTEESSSLP TESQEEE--- TTENSTLESL SGKKLTQKLK ENSBTAP00000032818/1-1216 KSHSTYEHVR EQPGGPGSPP AQSREEEE-- ATDNSVLGSP VGANRPRPLQ BACU013801/1-669 KSHSTYEHVR EQPGSPGSPP APSREDEEAV ATDDSALGSP AGTNRPRALQ bmy_11035T0/1-620 KSHSTYEHVR EQPGSPSSPP APSREEEEAA ATDDSALGSP AGTNRPRALQ ENSTTRP00000009485/1-1216 KSHSTYEHVR EQPGSPGSPP APSREEEAA- ATDDSALGSP AGTNRPRALQ 901 950 ENSP00000365529/1-1215 EDSEAESTES VPLVCKSASA HNLSSEKKTG HPRTSMLQKS LSVIASAKEK ENSBTAP00000032818/1-1216 EDSQAVSTES VPLVCKSASA HNLSSEKKPG PTRTSVLQKS LSVIASAKEK BACU013801/1-669 DDSQAVSTES VPLVCKSASA HNLSSEKKPG PPRTSVLQKS LSVIASAKEK bmy_11035T0/1-620 DDSQAVSTES VPLVCKSASA HNLSSEKKPG PPRTSVLQKS LSVIASAKEK ENSTTRP00000009485/1-1216 DDSQAVSTES VPLVCKSASA HNLSSEKKPG PPRTSVLQKS LSVIASAKEK 951 1000 ENSP00000365529/1-1215 TLGLAGKTQT AGVEERTKSQ KPLPKDKETN RNHSNSDNTE TKDPAPQNSN ENSBTAP00000032818/1-1216 TLGLAGKTQA ACVEERAKAQ KALPRERETN RKYSNSDNAE TQDSAPPNSS BACU013801/1-669 TLGLAGKTQA SGVEERAKAQ KALPREKETN RKYSNSDNAE TQDSAPPNSN bmy_11035T0/1-620 TLGLAGKTQA SGLEERAKAQ KALPREKETN RKYSNSDNAE TQDSAPPNSN ENSTTRP00000009485/1-1216 TLGLAGKTQA SGVEERAKAQ KALPREKETN RKYSNSDNAE TQDSAPPNSN 1001 1050 ENSP00000365529/1-1215 PAEEPRKPQK SGIMKQQRVN PTTANSDLNP GTTQMKDNFD IGEVCPWEVY ENSBTAP00000032818/1-1216 HSEEPRKPQK LGIMKQQRAN PTTANSDLSP GATHMKDNFD IGEVCPWEIY BACU013801/1-669 HSEEPRKPPK SGIMRQQRAN PPAANSDLSP GATQMKDSFD IGEVCPWEIY bmy_11035T0/1-620 HSEEPRKPPK SGIMRQQRAN PPAANSDLSP GATQMKDSFD IGEVCPWEIY ENSTTRP00000009485/1-1216 HSEEPRKPPK SGIMRQQRAN PPTASSDLSP GAPQMKDSFD IGEVCPWEIY 1051 1100 ENSP00000365529/1-1215 DLTPGPVPSE SKVQKHVSIV ASEMEKNPTF SLKEKSHHKP KAAEVCQQSN ENSBTAP00000032818/1-1216 DLAPGPGPLE SKVQKHVSIA ASEMERNPTF SLKEKSHPKP KAADLCQQSN BACU013801/1-669 DLTPGPVPSE SKVQKHVSIA ASEMEKTPIF SLKEKSHPKP KAAELCQQSN bmy_11035T0/1-620 DLTPGPVPSE SKVQKHVSIA ASEMEKTPIF SLKEKSHPKP KAAELCQQSN ENSTTRP00000009485/1-1216 DLTPGPVPSE SKVQKHVSIA ASEMEKTPIF SLKGKSHPKP KAAELCQQSN 1101 1150 ENSP00000365529/1-1215 QKRIDKAEVC LWESQGQSIL EDEKLLISKT PVLPERAKEE NGGQPRAANV ENSBTAP00000032818/1-1216 PKSVDKAEVC PWESQGQSLF EEEKYLMSKT QVPLGRAQGE NSGQHCATGV BACU013801/1-669 PKSIDKAEVC PWEIQGQSLF EDEKYVISKT QVPPGRAQGE NGGQHSAASV bmy_11035T0/1-620 PKSIDKTEVC PWEIQGQSLF EDEKYVISKT QVPPGRAQGE NGGQHSAASV ENSTTRP00000009485/1-1216 PKSIDKAEVC PWESQVQPLF EDEKCVISKT QVPPGRAQGE NGGQHSAASV 1151 1200 ENSP00000365529/1-1215 CAGQSEELPP KAVASKTENE NLNQIGHQEK KTSSSEENVR GSYNSSNNFQ ENSBTAP00000032818/1-1216 CAGQCEELPP KAVASKVENE NLNQLGEQEK KTSSSERNVP DSHNSSNNFQ BACU013801/1-669 CAGQCEELPP KAVASKVENE NLNQLGDQEK KTSSSEQNVP DSYNSSNNFQ bmy_11035T0/1-620 CAGQCEELPP KAVASKVENE NLNQLGDQEK KTSSSEQNVP DSYNSSNNFQ ENSTTRP00000009485/1-1216 CAGQCEELPP KAVASEVENE NLNQLGDQEK KTSSSEQNVP DSYNSSNNFQ 1201 1250 ENSP00000365529/1-1215 QPLTSRAEVC PWEFETPAQP NAGRSVALPA SSALSANKIA GPRKEEIWDS ENSBTAP00000032818/1-1216 PPLMSRAEVC PWEFETPDKP NAERSVAFPA SSALSANKIA GPRNEEVRLA BACU013801/1-669 QSLTSRAEGQ TH-------- ---------S TGLLQEGMEC GHRN-NIRYR bmy_11035T0/1-620 QSLTSRAEVC PWEFETPDQP NAERSVAFPA SSALSANKIA GPRK------ ENSTTRP00000009485/1-1216 QPLASRAEVC PWEFETPDQP NAERSVAFPA SSASSANKVA GPRK-EVWDH 1251 1300 ENSP00000365529/1-1215 FKV------- ENSBTAP00000032818/1-1216 RKV------- BACU013801/1-669 LGIMDLDSEM bmy_11035T0/1-620 ---------- ENSTTRP00000009485/1-1216 FKV-------