KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:24 2014 Check: 00 .. Name: ENSTTRP00000006207/1-767 Len: 1121 Check: 2639 Weight: 1.00 Name: bmy_05476T0/1-827 Len: 1121 Check: 889 Weight: 1.00 Name: BACU014520/1-1002 Len: 1121 Check: 5673 Weight: 1.00 Name: ENSP00000384081/1-817 Len: 1121 Check: 807 Weight: 1.00 Name: ENSBTAP00000032868/1-821 Len: 1121 Check: 7140 Weight: 1.00 // 1 50 ENSTTRP00000006207/1-767 ---------- ---------- ---------- ---------- -------DGL bmy_05476T0/1-827 ---------- ---------- -----MAGHL TMH------- -FPSPP---- BACU014520/1-1002 MVKEIEDQNK TEVGIKRGGR VGVCGCCGAL RPRYKRLVDN IFPEDPEDGL ENSP00000384081/1-817 ---------- ---------M YGVCGCCGAL RPRYKRLVDN IFPEDPEDGL ENSBTAP00000032868/1-821 ---------- -----ILVAV PGVCGCCGAL RPRYKRLVDN IFPEDPEDGL 51 100 ENSTTRP00000006207/1-767 VKTNMEKLTF YALSAPEKLD RIGAYLSERL IRDVGRHRYG ---------- bmy_05476T0/1-827 ---------- ---------- ---------- ---------- ---------- BACU014520/1-1002 VKTNMEKLTF YALSAPEKLD RIGAYLSERL IRDVGRHRYG SAFLSNQVWF ENSP00000384081/1-817 VKTNMEKLTF YALSAPEKLD RIGAYLSERL IRDVGRHRYG ---------- ENSBTAP00000032868/1-821 VKTNMEKLTF YALSAPEKLD RIGAYLSERL IRDVGRHRYG ---------- 101 150 ENSTTRP00000006207/1-767 ---------- ---------- ---------- -------YVX I--------- bmy_05476T0/1-827 ---------- ---------- ---------- ---------- ---------- BACU014520/1-1002 SDFDCQFLLS WRLLSPLLTE WKVFKQKQLP VLKFNSRYVC IAMEALDQLL ENSP00000384081/1-817 ---------- ---------- ---------- -------YVC IAMEALDQLL ENSBTAP00000032868/1-821 ---------- ---------- ---------- -------YVC IAMEALDQLL 151 200 ENSTTRP00000006207/1-767 ---------- -VESFLKMVA KLLESEKPNL QILGTNSFVK FANIEEDTPS bmy_05476T0/1-827 ---------- ---------- ---------- -----TQFVK FANIEEDTPS BACU014520/1-1002 MACHCQSINL FVESFLKMVA KLLESEKPNL QILGTNSFVK FANIEEDTPS ENSP00000384081/1-817 MACHCQSINL FVESFLKMVA KLLESEKPNL QILGTNSFVK FANIEEDTPS ENSBTAP00000032868/1-821 MACHCQSINL FVESFLKMVA KLLESEKPNL QILGTNSFVK FANIEEDTPS 201 250 ENSTTRP00000006207/1-767 YHRSYDFFVS RFSEMCHSGH EDLEIK---- ---------- ---------- bmy_05476T0/1-827 YHRSYDFFVS RFSEMCHSGH EDLEIKTNQG LPGAVLLQGG PVGVTGGRIP BACU014520/1-1002 YHRSYDFFVS RFSEMCHSGH EDLDIK---- ---------- ---------- ENSP00000384081/1-817 YHRSYDFFVS RFSEMCHSSH DDLEIK---- ---------- ---------- ENSBTAP00000032868/1-821 YHRSYDFFVS RFSEMCHSSH EDLEIK---- ---------- ---------- 251 300 ENSTTRP00000006207/1-767 ---------- ---------- ---------- ---------- -TKIRMSGIK bmy_05476T0/1-827 LSPQRRFPQQ PPCSRMAVKR QKGLEQVGCV QKQVMGKAGT VTRIRMSGIK BACU014520/1-1002 ---------- ---------- ---------- ---------- -TKIRMSGIK ENSP00000384081/1-817 ---------- ---------- ---------- ---------- -TKIRMSGIK ENSBTAP00000032868/1-821 ---------- ---------- ---------- ---------- -TKIRMSGIK 301 350 ENSTTRP00000006207/1-767 GLQGVVRKTV NDELQANIWD PQHMDKIVPS LLFNLQHVEE AES------- bmy_05476T0/1-827 GLQGVVRKTV NDELQANIWD PQHMDKIVPS LLFNLQHVEE AESESKAASL BACU014520/1-1002 GLQGVVRKTV NDELQANIWD PQHMDKIVPS LLFNLQHVEE AESESKAASL ENSP00000384081/1-817 GLQGVVRKTV NDELQANIWD PQHMDKIVPS LLFNLQHVEE AES------- ENSBTAP00000032868/1-821 GLQGVVRKTV NDELQANIWD PQHMDKIVPS LLFNLQHVEE AES------- 351 400 ENSTTRP00000006207/1-767 ---------- ---------- ---------- --RSPSPLQA PEKEKENPAE bmy_05476T0/1-827 GALALAFYQP AVDPLRSAFL KEKH------ --RSPSPLQA PEKEKENPAE BACU014520/1-1002 GALALAFYQP AV-PLKVCIP EGKTVMVLGS LGRSPSPLQA PEKEKEIPAE ENSP00000384081/1-817 ---------- ---------- ---------- --RSPSPLQA PEKEKESPAE ENSBTAP00000032868/1-821 ---------- ---------- ---------- --RSPSPLQA PEKEKENPAE 401 450 ENSTTRP00000006207/1-767 LAERCLRELL GRAAFGNIKN AIKPVLVHLD NHSLWEPKVF AIRCFKIIMY bmy_05476T0/1-827 LAERCLRELL GRAAFGNIKN AIKPVLVHLD NHSLWEPKVF AIRCFKIIMY BACU014520/1-1002 LAERCLRELL GRAAFGNIKN AIKPVLVHLD NHSLWEPKVF AIRCFKIIMY ENSP00000384081/1-817 LAERCLRELL GRAAFGNIKN AIKPVLIHLD NHSLWEPKVF AIRCFKIIMY ENSBTAP00000032868/1-821 LAERCLRELL GRAAFGNIKN AIKPVLIHLD NHSLWEPKVF AIRCFKIIMY 451 500 ENSTTRP00000006207/1-767 SIQPQHSHLV IQQLLSHLDA NSRSAATVRA GIVEVLSEAA VIAATGSV-- bmy_05476T0/1-827 SIQPQHSHLV IQQLLSHLDA NSRSAATVRA GIVEVLSEAA VIAATGSVGE BACU014520/1-1002 SIQPQHSHLV IQQLLSHLDA NSRSAATVRA GIVEVLSEAA VIAATGSV-- ENSP00000384081/1-817 SIQPQHSHLV IQQLLGHLDA NSRSAATVRA GIVEVLSEAA VIAATGSV-- ENSBTAP00000032868/1-821 SIQPQHSHLV IQQLLSHLDA NSRSAATVRA GIVEVLSEAA VIAATGSV-- 501 550 ENSTTRP00000006207/1-767 ---------- --------GP TVLEMFNTLL RQLRLSIDYA LTGSYDGAIS bmy_05476T0/1-827 NKRGVPAPDF RSPTPLRSGP TVLEMFNTLL RQLRLSIDYA LTGSYDGAIS BACU014520/1-1002 ---------- --------GP TVLEMFNTLL RQLRLSIDYA LTGSYDGAIS ENSP00000384081/1-817 ---------- --------GP TVLEMFNTLL RQLRLSIDYA LTGSYDGAVS ENSBTAP00000032868/1-821 ---------- --------GP TVLEMFNTLL RQLRLSIDYV LTGSYDGAIS 551 600 ENSTTRP00000006207/1-767 LGTKIIKEHE ERMFQEAVIK TIGSFASTLP TYQRSEVILF IMSKVPLPSL bmy_05476T0/1-827 LGTKIIKEHE ERMFQEAVIK TIGSFASTLP TYQRSEVILF IMSKVPLPSL BACU014520/1-1002 LGTKIIKEHE ERMFQEAVIK TIGSFASTLP TYQRSEVILF IMSKVPLPSL ENSP00000384081/1-817 LGTKIIKEHE ERMFQEAVIK TVGSFASTLP TYQRSEVILF IMSKVPRPSL ENSBTAP00000032868/1-821 LGTKIIKEHE ERMFQEAVIK TIGSFASTLP TYQRSEVILF IMSKVPLPSL 601 650 ENSTTRP00000006207/1-767 HHPMEMGRTG ENRNRLTQIM LLKSLLQVST GFQCNNMMSA LPSNFLDRLL bmy_05476T0/1-827 HHPMEMGRTG ENRNRLTQIM LLKSLLQVST GFQCNNMMSA LPSNFLDRLL BACU014520/1-1002 HHPMEMGRTG ---------- ---------- ---------- ---NFLDRLL ENSP00000384081/1-817 HQAVDTGRTG ENRNRLTQIM LLKSLLQVST GFQCNNMMSA LPSNFLDRLL ENSBTAP00000032868/1-821 HHPMETGRTG ENRNRLTQIM LLKSLLQVST GFQSNNMMSA LPSNFLDRLL 651 700 ENSTTRP00000006207/1-767 STALMEDAEI RLFVLEILIS FIDRHGNRHK FSTISTLSDI SVLKLKVDKC bmy_05476T0/1-827 STALMEDAEI RLFVLEILIS FIDRHGNRHK FSTISTLSDI SVLKLKVDKC BACU014520/1-1002 STALMEDAEI RLFVLEILIS FIDRHGNRHK FSTISTLSDI SVLKLKVDKC ENSP00000384081/1-817 STALMEDAEI RLFVLEILIS FIDRHGNRHK FSTISTLSDI SVLKLKVDKC ENSBTAP00000032868/1-821 STALMEDAEI RLFVLEILIS FIDRHGNRHK FSTISTLSDI SVLKLKVDKC 701 750 ENSTTRP00000006207/1-767 SRQDTIFMKK HSQQLYRHIY LSC-EETNIQ KHYEALYG-L ALISIELANE bmy_05476T0/1-827 SRQDTIFMKK HSQQLYRHIY LSCKEEANIQ QHYEALYGLL ALISVELANE BACU014520/1-1002 SRQDTIFMKK HSQQLYRHIY LSCKEEANIQ QHYEALYGLL ALISIELANE ENSP00000384081/1-817 SRQDTVFMKK HSQQLYRHIY LSCKEETNVQ KHYEALYGLL ALISIELANE ENSBTAP00000032868/1-821 SRQDTIFMKK HSQQLYRHIY LSCKEETNIH KHYEALYGLL ALISIELANE 751 800 ENSTTRP00000006207/1-767 EVVVDLIRLV LAVQDVAQVN EENLPVYNRC ALYALGAAYL NLISQLTTVP bmy_05476T0/1-827 EVVVDLIRLV LAVQDVAQVN EENLPVYNRC ALYALGAAYL NLISQLTTVP BACU014520/1-1002 EVVVDLIRLV LAVQDMAQVN EENLPVYNRC ALYALGAAYL NLISQLTTVP ENSP00000384081/1-817 EVVVDLIRLV LAVQDVAQVN EENLPVYNRC ALYALGAAYL NLISQLTTVP ENSBTAP00000032868/1-821 EVVVDLIRLV LAVQDVAQVN EENLPIYNRC ALYALGAAYL NLISQLTTVP 801 850 ENSTTRP00000006207/1-767 AFCQHIREVI ESRKKEAPYM LPEDVFVERP XXXXXXXXXX XXXXXXXXXX bmy_05476T0/1-827 AFCQHIREVI ESRKKEAPYM LPEDVFVERP RLSQNLDGVV IEFLFRQSKI BACU014520/1-1002 AFCQHIHEVI ESRKKEAPYM LPEDVFVERP RLSQNLDGVV IEFLFRQSKI ENSP00000384081/1-817 AFCQHIHEVI ETRKKEAPYM LPEDVFVERP RLSQNLDGVV IELLFRQSKI ENSBTAP00000032868/1-821 AFCQHIHEVI ETRKKEAPYM LPEDVFVERP RLTHNLDGVV IELLFRQSKI 851 900 ENSTTRP00000006207/1-767 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_05476T0/1-827 SEVLGGSGYN ADRLCLPYIP QLTDEDRLSK RKSIGETISL QVEVESRNSP BACU014520/1-1002 SEVLGGSGYN ADRLCLPYIP QLTDEDRLSK RKSIGETISL QVEVESRNSP ENSP00000384081/1-817 SEVLGGSGYN SDRLCLPYIP QLTDEDRLSK RRSIGETISL QVEVESRNSP ENSBTAP00000032868/1-821 SEVLGGSGYN ADRLCVPYIP QLTDEDRLSK RKSIGETISL QVEVESRNSP 901 950 ENSTTRP00000006207/1-767 XXXXRVPAEE ITYETLKKAI VDSVAVEEQE RERRRQVVEK FQKAPFEEIA bmy_05476T0/1-827 EKEERVPAEE ITYETLKKAI VDSVAVEEQE RERRRQVVEK FQKAPFEEIA BACU014520/1-1002 EKEERVPAEE ITYETLKKAI VDSVAVEEQE RERRRQVVEK FQKAPFEEIA ENSP00000384081/1-817 EKEERVPAEE ITYETLKKAI VDSVAVEEQE RERRRQVVEK FQKAPFEEIA ENSBTAP00000032868/1-821 EKEERVPAEE ITYETLKKAI VDSVAVEEQE RERRRQVVEK FQKAPFEEIA 951 1000 ENSTTRP00000006207/1-767 AHCGARASLL QSKLNQIFEI TIRPPPSPSG TITAAYGQPQ SHSIPVYEMK bmy_05476T0/1-827 AHCGARASLL QSKLNQIFEI TIRPPPSPSG TITAAYGQPQ NHSIPVYEMK BACU014520/1-1002 AHCGARASLL QSKLNQIFEI TIRPPPSPSG TITAAYGQPQ NHSIPVYEMK ENSP00000384081/1-817 AHCGARASLL QSKLNQIFEI TIRPPPSPSG TITAAYGQPQ NHSIPVYEMK ENSBTAP00000032868/1-821 AHCGARASLL QSKLNQIFEI TIRPPPSPSG TITAAYGQPQ NHSIPVYEMK 1001 1050 ENSTTRP00000006207/1-767 FPDLCVY--- ---------- ---------- ---------- ---------- bmy_05476T0/1-827 FPDLCVY--- ---------- ---------- ---------- ---------- BACU014520/1-1002 FPDLIWYLLR SDTYPENQKK TRKTGSPEIS PERGRSLRGP SSPPPRGRRG ENSP00000384081/1-817 FPDLCVY--- ---------- ---------- ---------- ---------- ENSBTAP00000032868/1-821 FPDLCVY--- ---------- ---------- ---------- ---------- 1051 1100 ENSTTRP00000006207/1-767 ---------- ---------- ---------- ---------- ---------- bmy_05476T0/1-827 ---------- ---------- ---------- ---------- ---------- BACU014520/1-1002 CQLVEGATFS RRSRSPTVRR LGFAAPLPAD SHAAPSTESF RRTQDRGKPK ENSP00000384081/1-817 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032868/1-821 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSTTRP00000006207/1-767 ---------- ---------- - bmy_05476T0/1-827 ---------- ---------- - BACU014520/1-1002 IPLRSELGES IPRPQGQGVR G ENSP00000384081/1-817 ---------- ---------- - ENSBTAP00000032868/1-821 ---------- ---------- -