KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:26 2014 Check: 00 .. Name: ENSP00000370214/1-300 Len: 300 Check: 9661 Weight: 1.00 Name: ENSBTAP00000032880/1-296 Len: 300 Check: 6206 Weight: 1.00 Name: ENSTTRP00000014350/1-300 Len: 300 Check: 602 Weight: 1.00 Name: bmy_05478T0/1-250 Len: 300 Check: 2773 Weight: 1.00 Name: BACU014516/1-300 Len: 300 Check: 1107 Weight: 1.00 // 1 50 ENSP00000370214/1-300 MEQANPLRPD GESKGGVLAH LERLETQVSR SRKQSEELQS VQAQEGALGT ENSBTAP00000032880/1-296 MELANTLRQD GESRGGVLAH LERLETQVSK SRKKLEEPQN AQALEA---- ENSTTRP00000014350/1-300 MELANTLSQD GESRGGVLAH LERLETQVSR SRKKMEEPQS AQAEESALGT bmy_05478T0/1-250 MELANTLSQD GESKGGVLAH LERLETQVSR CRKKLEEPQS AQAVESALGT BACU014516/1-300 MELANTLSQD GESRGGVLAH LERLETQVSR CRKKLEEPQS TQAVESALGT 51 100 ENSP00000370214/1-300 KIHKLRRLRD ELRAVVRHRR ASVKACIANV EPNQTVEINE QEALEEKLEN ENSBTAP00000032880/1-296 RIHELKRLRD KLRAEVKQRQ ARVKASTANV EPDQILEISE QEILERKQEN ENSTTRP00000014350/1-300 RIHELRRLRD KLRAEVKQHQ ASVKASTTNV EPDQTLEITE QESLKRKWEN bmy_05478T0/1-250 RIHELRRLRD KLRAEVKQHQ ARVKASTTNV EPDQTLEITE QEILKRKREN BACU014516/1-300 RIHELRRLRD KLRAEVKQHQ ARVKASTTNV EPDQTLEITE QEILKRKREN 101 150 ENSP00000370214/1-300 VKAILQAYHF TGLSGKLTSR GVCVCISTAF EGNLLDSYFV DLVIQKPLRI ENSBTAP00000032880/1-296 MKAILQAYRF TGISGKLTSR GVCVCISTAF EGNLLDSYFV DLVMEKPLWI ENSTTRP00000014350/1-300 VKAILQAYRF TGISGKLTSR GVCVCISTAF EGNLLDSYFV DLVMRKPLQI bmy_05478T0/1-250 VKAILQAYRF T--------- ---------- ---------- ---------- BACU014516/1-300 VKAILQAYRF TGISGKLTSR GVCVCIGTAF EGNLLDSYFV DLVMQKPPQI 151 200 ENSP00000370214/1-300 HHHSVPVFIP LEEIAAKYLQ TNIQHFLFSL CEYLNAYSGR KYQADRLQSD ENSBTAP00000032880/1-296 HHHSVPVFIP LEEISAKYLQ TNTRHFLFVL WEYLNAYSGR KYQADRLQSD ENSTTRP00000014350/1-300 HHHSIPVFIP LEEISAKYLQ TNIQHFLFTL CEYLNAYSGR KYQADRLQSD bmy_05478T0/1-250 ---------- -EEISAKYLQ TNIQHFLFTL CEYLNAYSGR KYQADRLQSD BACU014516/1-300 HHHSIPVFIP LEEISAKYLQ TNIQHFLFTL CEYLNAYSGR KYQADRLQSD 201 250 ENSP00000370214/1-300 FAALLTGPLQ RNPLCNLLSF TYKLDPGGQS FPFCARLLYK DLTATLPTDV ENSBTAP00000032880/1-296 FAAFLVGPLQ RNSLCNLLSF TYKVKPEGQS FPFCARLLYK DLTTTLPTDV ENSTTRP00000014350/1-300 FEAFLAGPLQ RNSLCNLLSF TYKAEPEGQS FPFCARLLYK DLTTTLPTDV bmy_05478T0/1-250 FAAFLAGPLQ RNSLCNLLSF TYKAEPEGQS FPFCARLLYK DLTTTLPTDV BACU014516/1-300 FAAFLAGPLQ RNSLCNLLSF TYKAEPEGQS FPFCARLLYR DLTTTLPTDV 251 300 ENSP00000370214/1-300 TVTCQGVEVL STSWEEQRAS HETLFCTKPL HQVFASFTRK GEKLDMSLVS ENSBTAP00000032880/1-296 TVTSQGTEAL PSTWEEQRAA HENLFFTKPL HQVFTSFAKK GEKLDMSLVS ENSTTRP00000014350/1-300 TVTYQGTDAL STTQEEQRAA HENLFFTKPL HQVFTSFARK GDKLDMSLVS bmy_05478T0/1-250 TVTYQGTDAL STTREEQRAA HENLFFTKPL HQVFTSFARK GDKLDMSLVS BACU014516/1-300 TVTYQGTDAL STTWEEQQAA HENLFFTKPL HQVFTSFASK GDKLDMSLVS