KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:42:27 2014 Check: 00 .. Name: bmy_01093T0/1-389 Len: 567 Check: 4075 Weight: 1.00 Name: ENSP00000347648/1-567 Len: 567 Check: 5390 Weight: 1.00 Name: ENSTTRP00000011888/1-566 Len: 567 Check: 9901 Weight: 1.00 Name: ENSBTAP00000032885/1-567 Len: 567 Check: 5698 Weight: 1.00 // 1 50 bmy_01093T0/1-389 MSSRLGAVPA TPGPTSFKQQ RSTRIVGAKN -RTQCSIKDN SFQYTIPHDD ENSP00000347648/1-567 MSSRLGAVPA TSGPTTFKQQ RSTRIVGAKN SRTQCSIKDN SFQYTIPHDD ENSTTRP00000011888/1-566 MSSRLGAVPA TPGPTSFKQQ RSTRIVGAKN SRTQCSIKDN SFQYTIPHDD ENSBTAP00000032885/1-567 MSSRLGAVPA TPGPTPFKQQ RSTRIVGAKN SRTQCSIKDN SFQYTIPHDD 51 100 bmy_01093T0/1-389 SLSGSSSASS CEPVSDFPAS FRKSAYWMKM RRIKPAATSH VEGSGGVSGK ENSP00000347648/1-567 SLSGSSSASS CEPVSDFPAS FRKSTYWMKM RRIKPAATSH VEGSGGVSAK ENSTTRP00000011888/1-566 SLSGSSSASS CELVSDFPAS FRKSAYWMKM RRIKPAATSH VEGSGGVSAK ENSBTAP00000032885/1-567 SLSGSSSASS CEPVSDFPAS FRKSTYWMKM RRIKSAAASH VEGPGGVSTK 101 150 bmy_01093T0/1-389 GKRKPRQEED EDYREFPQKK HKLYGRKQRP KTQPNPKAQA RRIRKEPPAY ENSP00000347648/1-567 GKRKPRQEED EDYREFPQKK HKLYGRKQRP KTQPNPKSQA RRIRKEPPVY ENSTTRP00000011888/1-566 GKRKPRQEED EDYREFPQKK HKLYGRKQRP KTQPNPKAQA RRIRKEPP-Y ENSBTAP00000032885/1-567 GKRKPRQEED EDYREFPQKK HKLYGRKQRP KAQPNPKAQT RRIRKEPPAY 151 200 bmy_01093T0/1-389 AAGSLEEQWY LEIVDKGSVS CPTCQAVGRK TIEGLKKHME NCKQEMFTCH ENSP00000347648/1-567 AAGSLEEQWY LEIVDKGSVS CPTCQAVGRK TIEGLKKHME NCKQEMFTCH ENSTTRP00000011888/1-566 AAGSLEEQWY LEIVDKGSVS CPTCQAVGRK TIEGLKKHME NCKQEMFTCH ENSBTAP00000032885/1-567 AAGSLEEQWY LEIVDKGSVS CPTCQAVGRK TIEGLKKHME NCKQEMFTCH 201 250 bmy_01093T0/1-389 HCGKQLRSLA GMKYHVMANH NSLPILKAGD EIDEPSERER LRTVLKRLGK ENSP00000347648/1-567 HCGKQLRSLA GMKYHVMANH NSLPILKAGD EIDEPSERER LRTVLKRLGK ENSTTRP00000011888/1-566 HCGKQLRSLA GMKYHVMANH NSLPILKAGD EIDEPSERER LRTVLKRLGK ENSBTAP00000032885/1-567 HCGKQLRSLA GMKYHVMANH NSLPILKAGD EIDEPSERER LRTVLKRLGK 251 300 bmy_01093T0/1-389 LRCMRESCSS SFTSIMGYLY HVRKCGKGAA ELEKMTLKCH HCGKPYRSKA ENSP00000347648/1-567 LRCMRESCSS SFTSIMGYLY HVRKCGKGAA ELEKMTLKCH HCGKPYRSKA ENSTTRP00000011888/1-566 LRCMRESCSS SFTSIMGYLY HVRKCGKGAA ELEKMTLKCH HCGKPYRSKA ENSBTAP00000032885/1-567 LRCMRESCSS SFTSIMGYLY HVRKCGKGAA ELEKMTLKCH HCGKPYRSKA 301 350 bmy_01093T0/1-389 GLAYHLRSEH GPISFFPESG QPECLKDMSL EPKSGGRVQR RSAKIAVYHL ENSP00000347648/1-567 GLAYHLRSEH GPISFFPESG QPECLKEMNL ESKSGGRVQR RSAKIAVYHL ENSTTRP00000011888/1-566 GLAYHLRSEH GPISFFPESG QPECLKDMSL EAKSGGRVQR RSAKIAVYHL ENSBTAP00000032885/1-567 GLAYHLRSEH GPISFFPESG QPECLKDMSL ESKSGGRVQR RSAKIAVYHL 351 400 bmy_01093T0/1-389 QELASAELAK EWPKRKVLQD LVPDDRKV-- ---------- ---------- ENSP00000347648/1-567 QELASAELAK EWPKRKVLQD LVPDDRKLKY TRPGLPTFSQ EVLHKWKTDI ENSTTRP00000011888/1-566 QELASAELAK EWPKRKVLQD LVPDDRKLKY TRPGLPTFSQ EVLHKWKSDI ENSBTAP00000032885/1-567 QELASAELAK EWPKRKVLQD LVPDDRKLKY TRPGLPTFSQ EVLHKWKSDI 401 450 bmy_01093T0/1-389 ---------- ---------- ---------- --------RQ KVVLILNHYV ENSP00000347648/1-567 KKYHRIQCPN QGCEAVYSSV SGLKAHLGSC TLGNFVAGKY KCLLCQKEFV ENSTTRP00000011888/1-566 KKYHRIQCPN QGCEAVYSSV SGLKAHLGSC TLGTFVAGKY KCLLCQKEFV ENSBTAP00000032885/1-567 KKYHRIQCPN QGCEAVYSSV SGLKAHLGSC TLGTFVAGKY KCLLCQKEFV 451 500 bmy_01093T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000347648/1-567 SESGVKYHIN SVHAEDWFVV NPTTTKSFEK LMKIKQRQQE EEKRRQQHRS ENSTTRP00000011888/1-566 SESGVKYHIN SVHAEDWFVV NPTTTKSFEK LMKIKQRQQE EEKRRQQHRS ENSBTAP00000032885/1-567 SESGVKYHIN SVHAEDWFVV NPTTTKSFEK LMKIKQRQQE EEKRRQQHRS 501 550 bmy_01093T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000347648/1-567 RRSLRRRQQP GIELPETELS LRVGKDQRRN NEELVVSASC KEPEQEPVPA ENSTTRP00000011888/1-566 RRSLRRRQQP GIELPETELS LRVGKDQRRS HEELLVATSC KEPEQEPVPT ENSBTAP00000032885/1-567 RRSLRRRQQP GIELPETEPS LRVGKDQRRN HEELLVATSR KEPEQEPVPT 551 600 bmy_01093T0/1-389 ---------- ------- ENSP00000347648/1-567 QFQKVKPPKT NHKRGRK ENSTTRP00000011888/1-566 QFQKVKPPKT NHKRGKK ENSBTAP00000032885/1-567 QFQKVRSPKT NHKRGKK