KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:28 2014 Check: 00 .. Name: ENSTTRP00000014266/1-315 Len: 547 Check: 496 Weight: 1.00 Name: ENSP00000375914/1-315 Len: 547 Check: 8514 Weight: 1.00 Name: ENSBTAP00000032900/1-322 Len: 547 Check: 5466 Weight: 1.00 Name: bmy_03789T0/1-189 Len: 547 Check: 2949 Weight: 1.00 Name: BACU001391/1-528 Len: 547 Check: 289 Weight: 1.00 // 1 50 ENSTTRP00000014266/1-315 MQRRSRGIST GLLLLLSQIF RVGINNIPPV TLTTLALNIW FFLNPLKPLL ENSP00000375914/1-315 MQRRSRGINT GLILLLSQIF HVGINNIPPV TLATLALNIW FFLNPQKPLY ENSBTAP00000032900/1-322 MHRRSRGVNI GLLLLLSQIF QVGINNVPPV TLATLALNIW FFLNPLKPLL bmy_03789T0/1-189 MQRRSRGINI GLLLLLSQIF HVGINNIPPV TLATLALNIW FFLNPLKPLL BACU001391/1-528 MQRRSRGINI GLLLLLSQIF HVGISNIPPV TLATLALNIW FFLNPLKPLL 51 100 ENSTTRP00000014266/1-315 SSC-SVEKCY QQKDWQRLLL SPIHHVDDWH LYFNMTSMLW KGIHLERRLG ENSP00000375914/1-315 SSCLSVEKCY QQKDWQRLLL SPLHHADDWH LYFNMASMLW KGINLERRLG ENSBTAP00000032900/1-322 SSCLSVEKCY YQKDWQRLLL SPLHHADDWH LYFNMVSMLW KGIHLERRLG bmy_03789T0/1-189 SSCLSVEKCY QQKDWQRLLL SPLHHVDDWH LYFNMASMLW KGIHLERRLG BACU001391/1-528 SSCLSVEKCY QQKDWQRLLL SPLHHVDDWH LYFNMASMLW KGIHLEGRLG 101 150 ENSTTRP00000014266/1-315 SKWFAYVITT FSLLTGVVYL LLEFALAEFM DDPDFRRDCA VGFSXXXXXX ENSP00000375914/1-315 SRWFAYVITA FSVLTGVVYL LLQFAVAEFM DEPDFKRSCA VGFSGVLFAL ENSBTAP00000032900/1-322 SRWFAYIIVT FSLLTGVVYL FLEFALAEFL NEPDFKRNCA VGFSGVLFAL bmy_03789T0/1-189 SRWFAYIITT FSLLTGVVYL FLEFALAELM DEPDLRSNCA VGFSGVLFAL BACU001391/1-528 SRWFAYVITT FSLLTGVVYL FLEFALAELM DEPDFRRNCA VGFSGVLFAL 151 200 ENSTTRP00000014266/1-315 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXT SFAGHLAGIL ENSP00000375914/1-315 KVLNNHYCPG GFVNILGFPV PNRFACWVEL VAIHLFSPGT SFAGHLAGIL ENSBTAP00000032900/1-322 KVLNNHCCPG GFVNVLGFPV SNRFACWVEL LAIHFISPGT SFAGHLAGIL bmy_03789T0/1-189 KVLNNHYCPG GFVNVLGFPV PNKFACWAEL LAIHFISPG- ---------- BACU001391/1-528 KVLNNHYCPG GFVNVLGFPV PNKFACWAEL LAIHFISPGT SFAGHLAGIL 201 250 ENSTTRP00000014266/1-315 VGLMYTCGPL KKIMEICSXX XXXXXXXXXX XXXXXXXXYS GYQDYYPRGR ENSP00000375914/1-315 VGLMYTQGPL KKIMEACAGG FSSSVGYPGR QYYFNSSGSS GYQDYYPHGR ENSBTAP00000032900/1-322 VGLMYTHGPL KKIMELCTGI FPSNIDYPGQ QYYFNSSGYS GYQDYYPYGG bmy_03789T0/1-189 ---------- ---------- ---------- ---------- ---------- BACU001391/1-528 VGLMYVCGPL RKIMETCSGY F--------- ---------- GYQDYYPRGR 251 300 ENSTTRP00000014266/1-315 PGYPEEVPRN FDAYTAGLSE EEQLERALRA SLRDQGN--- ---------- ENSP00000375914/1-315 PDHYEEAPRN YDTYTAGLSE EEQLERALQA SLWDRGN--- ---------- ENSBTAP00000032900/1-322 RGAYEDVPRN YDTYTAGLSE EEQLERALRA SLLDQGN--- ---------- bmy_03789T0/1-189 ---------- ---------- ---------- ---------- ---------- BACU001391/1-528 PGYYEEVPRN YDAYTAGLSE EEQLERALRA SLRDQGTAMV VAAIYFSLSD 301 350 ENSTTRP00000014266/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000375914/1-315 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032900/1-322 ---------- ---------- ---------- ---------- ---------- bmy_03789T0/1-189 ---------- ---------- ---------- ---------- ---------- BACU001391/1-528 QSGKMSGNQV VKGLEEELLK PLEDPKVELA QLRVAKVTGG AASKLSKIRV 351 400 ENSTTRP00000014266/1-315 ---------- ---------- ------RRNS P--------- ---------- ENSP00000375914/1-315 ---------- ---------- ------TRNS P--------- ---------- ENSBTAP00000032900/1-322 ---------- ---------- ------RRSS P--------- ---------- bmy_03789T0/1-189 ---------- ---------- ---------- ---------- ---------- BACU001391/1-528 VRKAIARVLT VINQTQKENL RKFYKGRKYK PLDLRPKKTR AMCRRLNKRE 401 450 ENSTTRP00000014266/1-315 ---------- -----PAYRF H--------- ---------- ---LTPEEEM ENSP00000375914/1-315 ---------- -----PPYGF H--------- ---------- ---LSPE-EM ENSBTAP00000032900/1-322 ---------- -----PAYGF R--------- ---------- ---LSPEEEM bmy_03789T0/1-189 ---------- ---------- ---------- ---------- ---------- BACU001391/1-528 ENLKPEKQQR KQRLYPLRKY KPLDLRPKKT RAMCRRLNKR EENLKPEKQQ 451 500 ENSTTRP00000014266/1-315 RRKRLHRFDG Q--------- ---------- ---------- ---------- ENSP00000375914/1-315 RRQRLHRFDS Q--------- ---------- ---------- ---------- ENSBTAP00000032900/1-322 RRQRLHRFDS QRGDPAL--- ---------- ---------- ---------- bmy_03789T0/1-189 ---------- ---------- ---------- ---------- ---------- BACU001391/1-528 RKQRLYPLRK VNLHGLSSEF SDLVAIEHVG KLESPLLMKE GNTKGLHERG 501 550 ENSTTRP00000014266/1-315 ---------- ---------- ---------- ---------- ------- ENSP00000375914/1-315 ---------- ---------- ---------- ---------- ------- ENSBTAP00000032900/1-322 ---------- ---------- ---------- ---------- ------- bmy_03789T0/1-189 ---------- ---------- ---------- ---------- ------- BACU001391/1-528 ERDEDCTVTF ARSFVFTSPE DQALILLSAR LGRKQRAIPH PPGVLPW