KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:28 2014 Check: 00 .. Name: ENSP00000386911/1-646 Len: 646 Check: 3152 Weight: 1.00 Name: ENSBTAP00000032931/1-640 Len: 646 Check: 5153 Weight: 1.00 Name: ENSTTRP00000012875/1-642 Len: 646 Check: 7919 Weight: 1.00 Name: bmy_09592T0/1-471 Len: 646 Check: 1156 Weight: 1.00 Name: BACU013736/1-618 Len: 646 Check: 5322 Weight: 1.00 // 1 50 ENSP00000386911/1-646 MSLKLPRNWD FNLKVEAAKI ARSRSVMTGE QMAAFHPSST PNPLERPIKM ENSBTAP00000032931/1-640 MSLKLPRNWD FNLRGEAGKI ARSRSVMTGE QMAAFHPAST PNPLERPIKM ENSTTRP00000012875/1-642 MSLKLPRNWD FNLRGEAGKI ARSRSVMTGE QMAAFHPASI PNPLERPIKM bmy_09592T0/1-471 ---------- ---------- ---------- ---------- ---------- BACU013736/1-618 ---------- ---------- ------MTGE KMATFHPASA PNPLERPIKM 51 100 ENSP00000386911/1-646 GWLKKQRSIV KNWQQRYFVL RAQQLYYYKD EEDTKPQGCM YLPGCTIKEI ENSBTAP00000032931/1-640 GWLKKQRSIV RNWQQRYFVL RAQQLYYYKD EEDVKPQGCM YLPGSTIKEI ENSTTRP00000012875/1-642 GWLKKQRSLV KNWQQRYFVL RAQQLYYYKD EEDVKPQGCM YLPGSTIKEI bmy_09592T0/1-471 ---------- ---------- ---------- ---------- ---------- BACU013736/1-618 GWLKKQRSIV KNWQQRYFVL RAQQLYYYKD EEDVKPQGCM YLPGSTIKEI 101 150 ENSP00000386911/1-646 ATNPEEAGKF VFEIIPASWD QNRMGQDSYV LMASSQAEME EWVKFLRRVA ENSBTAP00000032931/1-640 ATNPEEAGKF VFEVIPASCD QSRTGQDSYV LMASSQAEME EWVKFLRRVS ENSTTRP00000012875/1-642 ATNPEEAGKF VFEVIPASCD QSRTGQDSYV LMASSQAEME EWVKFLRRVA bmy_09592T0/1-471 ---------- ---------- ---------- ---------- ---------- BACU013736/1-618 ATNPEEAGKF VFEVIPASCD QSRTGQDSYV LMASSQAEME EWVKFLRRVA 151 200 ENSP00000386911/1-646 GTPCGAVFGQ RLDETVAYEQ KFGPHLVPIL VEKCAEFILE HGRNEEGIFR ENSBTAP00000032931/1-640 GTPSGAVFGQ RLDETVAYEQ KFGPHLVPIL VEKCAEFILE HGLNEEGIFR ENSTTRP00000012875/1-642 GTPSG-VFGQ RLDETVAYEQ KFGPHLVPIL VEKCAEFILE HGLNEEGIFR bmy_09592T0/1-471 ------VFGQ RLDETVAYEQ KFGPHLVPIL VEKCAEFILE HGLNEEGIFR BACU013736/1-618 GTPSGAVFGQ RLDETVAYEQ KFGPHLVPIL VEKCAEFILE HGLNEEGIFR 201 250 ENSP00000386911/1-646 LPGQDNLVKQ LRDAFDAGER PSFDRDTDVH TVASLLKLYL RDLPEPVVPW ENSBTAP00000032931/1-640 LPGQDNLVKQ LRDAFDAGER PSFDRDTDVH TVASLLKLYL RDLPEPVVPW ENSTTRP00000012875/1-642 LPGQDNLVKQ LRDAFDAGER PSFDRDTDVH TVASLLKLYL RDLPEPVVPW bmy_09592T0/1-471 LPGQDNLVKQ LRDAFDAGER PSFDRDTDVH TVASLLKLYL RDLPEPVVPW BACU013736/1-618 LPGQDNLVKQ LRDAFDAGER PSFDRDTDVH TVASLLKLYL RDLPEPVVPW 251 300 ENSP00000386911/1-646 SQYEGFLLCG QLTNADEAKA QQELMKQLSI LPRDNYSLLS YICRFLHEIQ ENSBTAP00000032931/1-640 SQYDGFLLCG QLMNSDEAKA QQELIKQLSI LPRENYSLLS YICRFLHEIQ ENSTTRP00000012875/1-642 SQYEGFLLCG QLMNADEGKA QQELMKQLSI LPRDNYSLLS YICRFLHEIQ bmy_09592T0/1-471 SQYEGFLLCG QLMNADEAKA QQELMKQLSI LPRDNYSLLS YICRFLHEIQ BACU013736/1-618 SQYEGFLLCG QLMNADEAKA QQELMKQLSI LPRDNYSLLS YICRFLHEIQ 301 350 ENSP00000386911/1-646 LNCAVNKMSV DNLATVIGVN LIRSKVEDPA VIMRGTPQIQ RVMTMMIRDH ENSBTAP00000032931/1-640 LNCGVNKMSV DNLATVIGVN LIRSKVEDPA VIMRGTPQIQ RVMTMMIRDH ENSTTRP00000012875/1-642 LNCGVNKMSV DNLATVIGVN LITSKVEDPA VIMRGTPQIQ RVMTMMIRDH bmy_09592T0/1-471 LNCGVNKMSV DNLATVI--- ---------- ----GTPQIQ RVMTMMIRDH BACU013736/1-618 LNCGVNKMSV DNLATVIGVN LIRSKVEDPA VIMRGTPQIQ RVMTMMIRDH 351 400 ENSP00000386911/1-646 EVLFPKSKDI PLSPPAQKND PKKAPVARSS VGWDATEDLR ISRTDSFSSM ENSBTAP00000032931/1-640 EVLFPKSKDA PLSPPAPQND PKKPPVARSS VGWDATEDPP ISRTDS---- ENSTTRP00000012875/1-642 EILFPKSKDA PLSPPAPKND PKKPPVARSS VGWDATEDPP ISRTDSVSNM bmy_09592T0/1-471 EVLFPKSKDA PLSPPAPKND PKKPPVARSS VGWDATEDPP ISRTDSVSNM BACU013736/1-618 EVLFPKSKDA PLSPPAPKND PKKPPVARSS VGWDATEDPP ISRTDSVSNM 401 450 ENSP00000386911/1-646 TSDSDTTSPT GQQPSDAFPE DSSKVPREKP GDWKMQSRKR TQTLPNRKCF ENSBTAP00000032931/1-640 ASDSDATSPT GQQPNDGCLE D--KASRDKP GDWKPQSRKR TQTLPNRKCF ENSTTRP00000012875/1-642 ASDSDATSPT GQRPSDGCLE D--KASREKP GDWKLQSRKR TQTLPNRKCF bmy_09592T0/1-471 ASDSDATSPT GQRPSDGCLE D--KASREKP GDWKLQSRKR TQTLPNRKCF BACU013736/1-618 ASDSDATSPT GQQPSDGCLE D--KASREKP GDWKLQSRKR TQTLPNRKCF 451 500 ENSP00000386911/1-646 LTSAFQGANS SKMEIFKNEF WSPSSEAKAG EGHRRTMSQD LRQLSDSQRT ENSBTAP00000032931/1-640 LTSALQGANS CKTEIFKNEF WSSSSEAKAG DGHRRTMSQG VPQLFDSQRT ENSTTRP00000012875/1-642 LTSALQGANS CKAEIFKNEF WS-SSEGKAG DGHRRTMSQG VPQFLDSQRT bmy_09592T0/1-471 LTSALQGANS CKVEIFKNEF WSSSSEGKAG DGHRRTMSQG VPQFFDSQRT BACU013736/1-618 LTSALQGANS CKVEIFKNEF WSSPLEGKAG DGHKRTMSQG VPQFFDSQRT 501 550 ENSP00000386911/1-646 STYDNVPSLP GSPGEEASAL SSQACDSKGD TLASPNSETG PGKKNSGEEE ENSBTAP00000032931/1-640 STYDNVPTQP GSPGDKASTL SPQACDSKRD ALASLNSETG PGKKISGEEE ENSTTRP00000012875/1-642 STYDNVPTQP GSPGDEAGTL SSQACDSKSD ALASLNSETG PGRNNSGEEE bmy_09592T0/1-471 STYDNVPTQP GSPGDEAGTL SSQACDSKRD ALASLNSETG PGKKNSGEEE BACU013736/1-618 STYDNVPTQP GSPGDEAGTL SSQACDSKRD ALASLNSETG PGKKNSGEEE 551 600 ENSP00000386911/1-646 IDSLQRMVQE LRKEIETQKQ MYEEQIKNLE KENYDVWAKV VRLNEELEKE ENSBTAP00000032931/1-640 LESLQRMVQE LRKEIETQKQ MYEEQIENLE KENYDVWAKV VRLNEELENE ENSTTRP00000012875/1-642 LESLQRMVQK LRKEIETQKQ MYEEQIENLE KENYDVWAKV VRLSEELEKE bmy_09592T0/1-471 LESLQRMVQE LRKGIEIQKQ MYEEQIENLE KENYDVWAKV VRLSEELEKE BACU013736/1-618 LESLQRMVQE LQKEIEIQKQ MYEEQIENLE MENYDVWAKV VRLSEELEKE 601 650 ENSP00000386911/1-646 KKKSAALEIS LRNMERSRED VEKRNKALEE EVKEFVKSMK EPKTEA ENSBTAP00000032931/1-640 KKKSAALEIS LRNVERCRED VEKRNKVLEE EVKEFVKSIK EPKTDA ENSTTRP00000012875/1-642 KKKSAALEIS LRNVERSRED VERRNKALEE DVKEFVKSMK EPKTDA bmy_09592T0/1-471 KKKSEALEIS LRNMERSRED VERRNKALEE DVKEFVKSMK EPKTDA BACU013736/1-618 KKKSAALEIS LRNVERSRED VERRNKALEE DVKEFVKSMK EPKTNA