KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:42:31 2014 Check: 00 .. Name: bmy_11712T0/1-350 Len: 658 Check: 4627 Weight: 1.00 Name: ENSBTAP00000032975/1-381 Len: 658 Check: 8200 Weight: 1.00 Name: BACU005918/1-645 Len: 658 Check: 3158 Weight: 1.00 Name: ENSTTRP00000008501/1-204 Len: 658 Check: 6402 Weight: 1.00 // 1 50 bmy_11712T0/1-350 ---------- ---------- -MIVTVLIEA PSRAAARTEA LAGM------ ENSBTAP00000032975/1-381 ---------- ---------- ---------- ------MNEN SHSF------ BACU005918/1-645 MRFWVVFALL SVAAAGSGQS PSKLVTPTHA PVTGPASTRD SRQFILTPQP ENSTTRP00000008501/1-204 ---------- ---------- ---------- ------MNEN SCSF------ 51 100 bmy_11712T0/1-350 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032975/1-381 ---------- ---------- ---------- ---------- ---------- BACU005918/1-645 EQEHSDRPSL SQSTTKAVPG SSKPERHTVK AVTGNSEYEL HHKNDSLGNS ENSTTRP00000008501/1-204 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_11712T0/1-350 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032975/1-381 ---------- ---------- ---------- ---------- ---------- BACU005918/1-645 SRDPSTKSVS SPSSDNKEPT NPDLNTRADK ALQASRTESG EKGLLESDPS ENSTTRP00000008501/1-204 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_11712T0/1-350 ---------- ---------- ---------- -----AEAPE SSGTSFGT-- ENSBTAP00000032975/1-381 ---------- ---------- ---------- -----H-EKE LRD---GQ-- BACU005918/1-645 STQQEGEGKS LEPPEDEEPK ETEEGDTEPE EGAPPKDEKE MPGPASSENR ENSTTRP00000008501/1-204 ---------- ---------- ---------- -----HDEKE LRG---GQ-- 201 250 bmy_11712T0/1-350 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032975/1-381 ---------- ---------- ---------- ---------- ---------- BACU005918/1-645 ESTVLNTWSR EKDDLYKDNL GSSSAESSHF FAYLVTAAIL VAILYIAYHN ENSTTRP00000008501/1-204 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_11712T0/1-350 ---------- ---------- ---------- -HRNLHPGQL P--------- ENSBTAP00000032975/1-381 ---------- ---------- ---------- -VESVSAGSS PPCDKDSSAL BACU005918/1-645 KRKIIAFVLE GKRSKVTRRP KASDYQRLDQ KVESVSAGCP PPCDEDNSAL ENSTTRP00000008501/1-204 ---------- ---------- ---------- -VEGVSAGYP PPCDKDNSAL 301 350 bmy_11712T0/1-350 -----LQISE LKNHGILQAL TAEA-NGWEP A--------- ---------- ENSBTAP00000032975/1-381 LAFRGISISE LKNHSVLQAL TAEA-NAWEP RVVSTEVLQA QEEWEAVESI BACU005918/1-645 LAFRGIPISE LKNHGILQAL TAEA-NGWEP AVMNTEVLRA QEEWEAVDSI ENSTTRP00000008501/1-204 LAFRGIPISE LKNHGILRAL TAEANNGWEP AVMNTEVLRA QEEWEAVDSI 351 400 bmy_11712T0/1-350 ----GS---- ---------- ---------- -SMLEKRIQP TIRRTGLAAL ENSBTAP00000032975/1-381 HPETGSRASM DQPGQLISFS EALQHFQTVD LSSFKKRIQP TIRRTGLAAL BACU005918/1-645 QPETGSRASS DQPGQLISFS EALQHFQTVD LSSFKKRIQP TIRRTGLAAL ENSTTRP00000008501/1-204 QPETGSRASS DQPGQLISFI EALQHFQTVD LSSFKKRIQP TIRRTGLAAL 401 450 bmy_11712T0/1-350 RHCLFGPPKL HQGLREERDL VLTIAQCECT GAATRQALRG LDSQDPMHGR ENSBTAP00000032975/1-381 RHYLFGPPKL HQGLREERDL VLTIAQC--- ---------G LDSQDPMHGR BACU005918/1-645 RHCLFGPPKL HQGLREERDL VLTIAQC--- ---------G LDSQDPMHGR ENSTTRP00000008501/1-204 RHCLFGPPKL HQGLREERDL VLTIAQC--- ---------G LDSQDPMHGR 451 500 bmy_11712T0/1-350 VLQTIYKKLT GSKFDCALHG DHWEDLGFQG TNPATDLRGA GFLALLHLLY ENSBTAP00000032975/1-381 VLQTIYKKLT GSKFDCALHG DHWEDLGFQG TNPATDLRGA GFLALLHLLY BACU005918/1-645 VLQTIYKKLT GSKFDCALHG DHWEDLGFQG TNPATDLRGA GFLALLHLLY ENSTTRP00000008501/1-204 VLQTIYKKLT GSKFDCALHG DHWEDLGFQ- ---------- ---------- 501 550 bmy_11712T0/1-350 LVMDSKTLLM AQEIFRLSRH HVQQFPFCLM SVNITRIAIQ ALREECLSRE ENSBTAP00000032975/1-381 LVMDSKTLLM AREILRLSRH HIQLFTFCLS VINCSKISLQ VLREERGSRE BACU005918/1-645 LVMDSKTLLM AQEIFRLSRH HIQQFPFCLM SVNITRITIQ ALREECLSRE ENSTTRP00000008501/1-204 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_11712T0/1-350 CNRQQKVIPV VNSFYAATFL RLAHVWRTQH KTISDACFVL RDLEVLAKKS ENSBTAP00000032975/1-381 CNRQQKVIPV VNSFYAATFL RLAHVWRTQH KTISDSGFVL KDLEMSAKKS BACU005918/1-645 CNRQQKVIPV VNSFYAAAFL RLAHVWRTQH KTISDSGFVL RDLEVLAKKS ENSTTRP00000008501/1-204 ---------- ---------- ---------- ---------- ---------- 601 650 bmy_11712T0/1-350 PRRLLKTLEI YLAGVSKGQA SLLGARKCAG PQAPPSKDLT FTGVCDLPPH ENSBTAP00000032975/1-381 PRRLLKTLET YLAGVSKGQG SLLGTQKCSG PQAPHSKDLT FTGVCDLPSH BACU005918/1-645 PRRLLKTLEI YLAGVSKGQA SLLGAQKCAG PQAPPSKDLT FTGVCDLPPH ENSTTRP00000008501/1-204 ---------- ---------- ---------- ---------- ---------- 651 700 bmy_11712T0/1-350 SSEGTWLI ENSBTAP00000032975/1-381 LSEGTWLI BACU005918/1-645 SSEGTWLI ENSTTRP00000008501/1-204 --------