KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:35 2014 Check: 00 .. Name: ENSTTRP00000012517/1-593 Len: 603 Check: 5879 Weight: 1.00 Name: ENSP00000363107/1-594 Len: 603 Check: 9788 Weight: 1.00 Name: ENSBTAP00000033080/1-595 Len: 603 Check: 4304 Weight: 1.00 Name: BACU009900/1-550 Len: 603 Check: 5160 Weight: 1.00 Name: bmy_20625T0/1-565 Len: 603 Check: 9174 Weight: 1.00 // 1 50 ENSTTRP00000012517/1-593 IAAVRQGNCP EPEVSMNTAN PGLKIIYA-- VQSIISETMA NENGQRKYGG ENSP00000363107/1-594 MEAVCLGTCP EPEASMSTAI PGLKKGNNAL QSIILQTLLE KENGQRKYGG ENSBTAP00000033080/1-595 MESNHKSGDG LSGTQKEAAL RALVQRTG-- ------YSLV QENGQRKYGG BACU009900/1-550 ---------- ---------- ---------- ---------- -MESNHKSGD bmy_20625T0/1-565 ---------- ---------- ---------- --------MI EENGQRKYGG 51 100 ENSTTRP00000012517/1-593 PPPGWDAAPP ERGCEIFIGK LPRDLFEDEL IPLCEKIGKI YEMRMMMDFN ENSP00000363107/1-594 PPPGWDAAPP ERGCEIFIGK LPRDLFEDEL IPLCEKIGKI YEMRMMMDFN ENSBTAP00000033080/1-595 PPPGWDAAPP ERGCEIFIGK LPRDLFEDEL IPLCEKIGKI YEMRMMMDFN BACU009900/1-550 ---GLSGTQK EAALRALVQR TGYSLVQ--- ------IGKI YEMRMMMDFN bmy_20625T0/1-565 PPPGWDAAPP ERGCEIFIGK LPRDLFEDEL IPLCEKIGKI YEMRMMMDFN 101 150 ENSTTRP00000012517/1-593 GXXXXXXXXX XXXXXXXXXX XXXXXXXEIR NGRLLGVCAS VDNCRLFVGG ENSP00000363107/1-594 GNNRGYAFVT FSNKVEAKNA IKQLNNYEIR NGRLLGVCAS VDNCRLFVGG ENSBTAP00000033080/1-595 GNNRGYAFVT FSNKQEAKNA IKQLNNYEIR NGRLLGVCAS VDNCRLFVGG BACU009900/1-550 GNNRGYAFVT FSNKQEAKNA IKQLNNYEIR NGRLLGVCAS VDNCRLFVGG bmy_20625T0/1-565 GNNRGYAFVT FSNKQEAKNA IKQLNNYEIR NGRLLGVCAS VDNCRLFVGG 151 200 ENSTTRP00000012517/1-593 IPKTKKREEI LSEMKKVTEG VVDVIVYPSA ADKTKNRGFA FVEYENHRAA ENSP00000363107/1-594 IPKTKKREEI LSEMKKVTEG VVDVIVYPSA ADKTKNRGFA FVEYESHRAA ENSBTAP00000033080/1-595 IPKTKKREEI LSEMKKVTEG VVDVIVYPSA ADKTKNRGFA FVEYENHRAA BACU009900/1-550 IPKTKKREEI LSEMKKVTEG VVDVIVYPSA ADKTKNRGFA FVEYENHRAA bmy_20625T0/1-565 IPKTKKREEI LSEMKKVTEG VVDVIVYPSA ADKTKNRGFA FVEYENHRAA 201 250 ENSTTRP00000012517/1-593 AMARRKLLPG RIQLWGHPIA VDWAEPEVEV DEDTMSSVKI LYVRNLMLST ENSP00000363107/1-594 AMARRKLLPG RIQLWGHGIA VDWAEPEVEV DEDTMSSVKI LYVRNLMLST ENSBTAP00000033080/1-595 AMARRKLLPG RIQLWGHPIA VDWAEPEVEV DEDTMSSVKI LYVRNLMLST BACU009900/1-550 AMARRKLLPG RIQLWGHPIA VDWAEPEVEV DEDTMSSVKI LYVRNLMLST bmy_20625T0/1-565 AMARRKLLPG RIQLWGHPIA VDWAEPEVEV DEDTMSSVKI LYVRNLMLST 251 300 ENSTTRP00000012517/1-593 SEEMIEKEFN NIKPGAVERV KKIRDYAFVH FTNREDAVEA MKALNGKVLD ENSP00000363107/1-594 SEEMIEKEFN NIKPGAVERV KKIRDYAFVH FSNREDAVEA MKALNGKVLD ENSBTAP00000033080/1-595 SEEMIEKEFN NIKPGAVERV KKIRDYAFVH FTNREDAVEA MKALNGKVLD BACU009900/1-550 SEEMIEKEFN NIKPGAVERV KKIRDYAFVH FTNREDAVEA MKALNGKVLD bmy_20625T0/1-565 SEEMIEKEFN NIKPGAVERV KKIRDYAFVH FTNREDAVEA MKALNGKVLD 301 350 ENSTTRP00000012517/1-593 GSPIEVTLAK PVDKDSYVRY TRGTGGRGTM LQGEYTYSLG HVYDPTTAYL ENSP00000363107/1-594 GSPIEVTLAK PVDKDSYVRY TRGTGGRGTM LQGEYTYSLG QVYDPTTTYL ENSBTAP00000033080/1-595 GSPIEVTLAK PVDKDSYVRY TRGTGGRGAM LQGEYTYSLG HVYDPTTTYL BACU009900/1-550 GSPIEVTLAK PVDKDSYVRY TRGTGGRGTM LQGEYTYSLG HVYDPTTAYL bmy_20625T0/1-565 GSPIEVTLAK PVDKDSYVRY TRGTGGRGTM LQGEYTYSLG HVYDPTTAYL 351 400 ENSTTRP00000012517/1-593 GAPVFYAPQA YTAIPSLHFP ATKGHLGNRA IIRAPSVR-- ------GAAG ENSP00000363107/1-594 GAPVFYAPQT YAAIPSLHFP ATKGHLSNRA IIRAPSVR-- ------GAAG ENSBTAP00000033080/1-595 GAPVFYAPQA YTAIPSLHFP TTKGHLGNRA IIRAPSVREI YMNVPVGAAG BACU009900/1-550 GAPVFYAPQA YTAIPSLHFP ATKGHLGNRA IIRAPSVREI YMNVPVGAAG bmy_20625T0/1-565 GAPVFYAPQA YTAIPSLHFP ATKGHLGNRA IIRAPSVREI YMNVPVGAAG 401 450 ENSTTRP00000012517/1-593 VRGLGGRGYL AYTGLGRGYQ VKGDKREDKL YDLLPGMELT PMNPVTLKPQ ENSP00000363107/1-594 VRGLGGRGYL AYTGLGRGYQ VKGDKREDKL YDILPGMELT PMNPVTLKPQ ENSBTAP00000033080/1-595 VRGLGGRGYL AYTGLGRGYQ VKGDKREDKL YDLLPGMELT PMNPVTLKPQ BACU009900/1-550 VRGLGGRGYL AYTGLGRGYQ VKGDKREDKL YDLLPGMELT PMNPVTLKPQ bmy_20625T0/1-565 VRGLGGRGYL AYTGLGRGYQ VKGDKREDKL YDLLPGMELT PMNPVTLKPQ 451 500 ENSTTRP00000012517/1-593 GIKLAPQILE EVCQKNNWGQ PVYQLHSAIG QDQRQLFLYK ITIPALSSQN ENSP00000363107/1-594 GIKLAPQILE EICQKNNWGQ PVYQLHSAIG QDQRQLFLYK ITIPALASQN ENSBTAP00000033080/1-595 GIKLAPQILE EICQKNNWGQ PVYQLHSAIG QDQRQLFLYK ITIPALASQN BACU009900/1-550 GIKLAPQILE EVCQKNNWGQ PVYQLHSAIG QDQRQLFLYK ITIPALSSQN bmy_20625T0/1-565 GIKLAPQILE EVCQKNNWGQ PVYQLHSAIG QDQRQLFLYK ITIPALSSQN 501 550 ENSTTRP00000012517/1-593 PVIHPFTPPK LSAYVDEAKT YAAEYTLQTL GIPTDGADAQ TAAAAAASAT ENSP00000363107/1-594 PAIHPFTPPK LSAFVDEAKT YAAEYTLQTL GIPTDGGDG- TMATAAAAAT ENSBTAP00000033080/1-595 PAIHPFTPPK LSAYVDEAKT YAAEYTLQAL GIPTDGADAQ TAAAAAASAT BACU009900/1-550 PVIHPFTPPK LSAYVDEAKT YAAEYTLQTL GIPTDGADAQ TAAAAAASAT bmy_20625T0/1-565 PVIHPFTPPK LSAYVDEAKT YAAEYTLQSL GIPTDGADAQ TAAAVAASAT 551 600 ENSTTRP00000012517/1-593 AFPGYAVPNA AASMSAAQLK QAVTLGQDLA AYATYEVYPT FAVTAQGDGY ENSP00000363107/1-594 AFPGYAVPNA TAPVSAAQLK QAVTLGQDLA AYTTYEVYPT FAVTARGDGY ENSBTAP00000033080/1-595 AFPGYAVPSP TASVSAAQLK QAVTLGQDLA AYAAYEVYPT FAVTARGDGY BACU009900/1-550 AFPGYAVPNA TASVSAAQLK QAVTLGQDLA AYATYEVYPT FAVTAQGDGY bmy_20625T0/1-565 AFPGYAVPNA TASVSAAQLK QAVTLGQDLA AYATYEVYPT FAVTAQGDGY 601 650 ENSTTRP00000012517/1-593 GNF ENSP00000363107/1-594 GTF ENSBTAP00000033080/1-595 GTF BACU009900/1-550 GTF bmy_20625T0/1-565 GTF