KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:36 2014 Check: 00 .. Name: ENSP00000445626/1-589 Len: 589 Check: 7594 Weight: 1.00 Name: ENSTTRP00000002686/1-482 Len: 589 Check: 1007 Weight: 1.00 Name: ENSBTAP00000033084/1-482 Len: 589 Check: 2102 Weight: 1.00 Name: bmy_16175T0/1-483 Len: 589 Check: 3865 Weight: 1.00 Name: BACU010565/1-482 Len: 589 Check: 1003 Weight: 1.00 // 1 50 ENSP00000445626/1-589 MAVARGVGSP EPAPPQLYKW GGCGLGEPGS ALERRGAAAR GRCGRARAPR ENSTTRP00000002686/1-482 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033084/1-482 ---------- ---------- ---------- ---------- ---------- bmy_16175T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU010565/1-482 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000445626/1-589 LPDSFPRGEC PKPGARAPRS VRCGEPLPPA SPPPARPQAQ RARPRAPHSR ENSTTRP00000002686/1-482 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033084/1-482 ---------- ---------- ---------- ---------- ---------- bmy_16175T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU010565/1-482 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000445626/1-589 RRAMLHLSEF SEPDALLVKS TEGCCAEPSA ELPRLPARDA PAATGYPGAG ENSTTRP00000002686/1-482 ---MLHLSEF SGPDALLVKS TEGCCSESST ELTRLPARDP PAAAGYPGXX ENSBTAP00000033084/1-482 ---MLHLSEF SGPDALLVKS TEGCCSEPST DLTRLPARDP PAATGYPA-G bmy_16175T0/1-483 ---MLHLSEF SGPDALLVKS TEGCCSEPST ELTRLPARDP PAAAGYPGAG BACU010565/1-482 ---MLHLSEF SGPDALLVKS TEGCCSEPST ELTRLPARDP PAAAGYPG-G 151 200 ENSP00000445626/1-589 DFLSWALNSC GASGDLADSC FLEGPAPTPP PGLSYSGSFF IQAVPEHPHD ENSTTRP00000002686/1-482 XXXXXXXXXX XXXXXXXXXX XXEGPAPTPP PGLSYSGSFF -QAVPEHPHD ENSBTAP00000033084/1-482 DFLSWALSSC GAGEYLTDSC LLEGPAPTPP PGLGYSGSFF IQAVPEHPHD bmy_16175T0/1-483 DFLSWALSSC GAGGDLADSC FLEGPAPTPP PGLSYSGSFF IQAVPEHPHD BACU010565/1-482 DFLSWALSSC GAGGDLADSC FLEGPAPTPP PGLSYSGSFF IQAVPEHPHD 201 250 ENSP00000445626/1-589 PEALFNLMSG ILGLAPFPGP EAAASRSPLD APFPAGSDAL LPGPPDLYSP ENSTTRP00000002686/1-482 PEALFNLMSG ILGLAPFPGA EAAASRSPLD ASFPAGSDAL LPGPPDLFSP ENSBTAP00000033084/1-482 PEALFNLMSG ILGLTPFPGA EAAASRSPLD ASFPAGSDAL LPGPPDLFSP bmy_16175T0/1-483 PEALFNLMSG ILGLAPFPGA EAAASRSPLD ASFPAGSDAL LPGPPDLFSP BACU010565/1-482 PEALFNLMSG ILGLAPFPGA EAAASRSPLD ASFPAGSDAL LPGPPDLFSP 251 300 ENSP00000445626/1-589 DLGAAPFPEA FWEASPCAGA PSQCLYEPQL SPPDVKPGLR APPASPALDA ENSTTRP00000002686/1-482 DLGATVFPEA FWEASPSAGA PSQCLYEPHL SPPDVKPGLR APPASPALDT ENSBTAP00000033084/1-482 DPGAAAFPEA FWEASPSAGA PSQCLYEPHL SAPDVKPGLR APPASPALDT bmy_16175T0/1-483 DLGATVFPEA FWEASPSAGA PPQCLYEPHL SPPDVKPGLR APPASPALDT BACU010565/1-482 DLGATVFPEA FWEASPSAGA PPQCLYEPHL SPPDVKPGLR APPASPALDT 301 350 ENSP00000445626/1-589 VSAFKGPYAP WELLSVGAPG NCGSQGDYQA APEARFPVIG TKIEDLLSIS ENSTTRP00000002686/1-482 ASAFKGPYAP WELLSAGAPG SCGSQGGYQG APEARFPPMG AKIEDLLSIS ENSBTAP00000033084/1-482 ASAFKGPYSP WELLSAGAPG SCGSQGGYQA APEARFPTTG AKIEDLLSIS bmy_16175T0/1-483 ASAFKGPYAP WELLSAGAPG SCGSQGGYQG APEARFPPMG TKIEDLLSIS BACU010565/1-482 ASAFKGPYAP WELLSAGAPG SCGSQGGYQG APEARFPPMG AKIEDLLSIS 351 400 ENSP00000445626/1-589 CPAELPAVPA NRLYPSGAYD AFPLAPGDLG EGAEGLPGLL TPPSGEGGSS ENSTTRP00000002686/1-482 CPAELPAGPS SRVYTTGAYE AFPLAPGDLG EGTESLPGLL TPTSGEGGSS ENSBTAP00000033084/1-482 CPAELPGGPA SRLYTMGTYD AFPLAPGDLG EGAESLPGLL TPPSGEGGSS bmy_16175T0/1-483 CPAELPAGPS SRLYTTGAYD AFPLAPGDLG EGTESLPGLL TPTSGEGGSS BACU010565/1-482 CPAELPAGPS SRLYTAGAYD AFPLAPGDLG EGTESLPGLL TPTSGEGGSS 401 450 ENSP00000445626/1-589 GDGGEFLAST QPQLSPLGLR SAAAADFPKP LVADIPGSSG VAAPPVPPPP ENSTTRP00000002686/1-482 GEGGEFLDGT QPELSPLGLR S-AGADFPKP LVADLPGSSG VPEPPG--PP ENSBTAP00000033084/1-482 GEGGEFLDGT QPELSPLGLR S-ATADFPKP LVADIPGSSA VPEPPV--PP bmy_16175T0/1-483 GEGGEFLDGT QPELSPLGLR S-AGADFPKP LVADLPGSSG VPEPAG--PP BACU010565/1-482 GEGGEFLDGT QPELSPLGLR S-AGADFPKP LVADLPGSSG VPEPPG--PP 451 500 ENSP00000445626/1-589 PTPFPQAKAR RKGRRGGKCS TRCFCPRPHA KAFACPVESC VRSFARSDEL ENSTTRP00000002686/1-482 PVPFPTAKAR RKGRRGGKCS ARCFCPRPHA KAFACPVESC VRSFARSDEL ENSBTAP00000033084/1-482 PAPFPPAKAR RKGRRGGKCS ARCFCPRPHA KAFACPVESC VRSFARSDEL bmy_16175T0/1-483 PVPFPPAKAR RKGRRGGKCS ARCFCPRPHA KAFACPVESC VRSFARSDEL BACU010565/1-482 PVPFPPAKAR RKGRRGGKCS ARCFCPRPHA KAFACPVESC VRSFARSDEL 501 550 ENSP00000445626/1-589 NRHLRIHTGH KPFQCRICLR NFSRSDHLTT HVRTHTGEKP FACDVCGRRF ENSTTRP00000002686/1-482 NRHLRIHTGH KPFQCRICLR NFSRSDHLTT HVRTHTGEKP FACDVCGRRF ENSBTAP00000033084/1-482 NRHLRIHTGH KPFQCRICLR NFSRSDHLTT HVRTHTGEKP FACDVCGRRF bmy_16175T0/1-483 NRHLRIHTGH KPFQCRICLR NFSRSDHLTT HVRTHTGEKP FACDVCGRRF BACU010565/1-482 NRHLRIHTGH KPFQCRICLR NFSRSDHLTT HVRTHTGEKP FACDVCGRRF 551 600 ENSP00000445626/1-589 ARSDEKKRHS KVHLKQKARA EERLKGLGFY SLGLSFASL ENSTTRP00000002686/1-482 ARSDEKKRHS KVHLKQKARA EERLKGLGFY SLGLSFAAL ENSBTAP00000033084/1-482 ARSDEKKRHS KVHLKQKARA EERLKGLGFY SLGLSFAAL bmy_16175T0/1-483 ARSDEKKRHS KVHLKQKARA EERLKGLGFY SLGLSFAAL BACU010565/1-482 ARSDEKKRHS KVHLKQKARA EERLKGLGFY SLGLSFAAL