KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:42:36 2014 Check: 00 ..
Name: ENSTTRP00000016577/1-300 Len: 302 Check: 7035 Weight: 1.00
Name: ENSP00000233615/1-269 Len: 302 Check: 9177 Weight: 1.00
Name: ENSBTAP00000033108/1-269 Len: 302 Check: 8844 Weight: 1.00
Name: bmy_12424T0/1-249 Len: 302 Check: 894 Weight: 1.00
Name: BACU010575/1-249 Len: 302 Check: 868 Weight: 1.00
//
1 50
ENSTTRP00000016577/1-300 MARASGGNGS EEDWGALRVP QQQSLAASTL EGAIWRRAGT QTRALDAIRH
ENSP00000233615/1-269 MARASSGNGS EEAWGALRAP QQQ------- ---------- ----------
ENSBTAP00000033108/1-269 MARATGGNGS EEAWGALRVR QQQ------- ---------- ----------
bmy_12424T0/1-249 MARASGGNGS EEDWGALRVP QQQ------- ---------- ----------
BACU010575/1-249 MARASGGNGS EEDWGALRVP QQQ------- ---------- ----------
51 100
ENSTTRP00000016577/1-300 PQQSHLXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000233615/1-269 ------LREL CPGVNNQPYL CESGHCCGET GCCTYYYELW WFWLLWTVLI
ENSBTAP00000033108/1-269 ------LREL CPGVNNQPYL CESGHCCGET GCCTYYYELW WFWLLWTVLI
bmy_12424T0/1-249 ------LREL CPGVNNQPYL CESGHCCGET GCCTYYYELW WFWLLWTVLI
BACU010575/1-249 ------LREL CPGVNNQPYL CESGHCCGET GCCTYYYELW WFWLLWTVLI
101 150
ENSTTRP00000016577/1-300 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000233615/1-269 LFSCCCAFRH RRAKLRLQQQ QRQREINLLA YHGACHGAGP FPTGSLLDLR
ENSBTAP00000033108/1-269 LFSCCCAFRH RRAKLRLQQQ QRQREINLLA YHGACHGAGP VPAGSLLDLR
bmy_12424T0/1-249 LFSCCCAFRH RRAKLRLQQQ QRQREINLLA YHGACHGAGP VPPGSLLDLR
BACU010575/1-249 LFSCCCAFRH RRAKLRLQQQ QRQREINLLA YHGACHGAGP VPPGSLLDLR
151 200
ENSTTRP00000016577/1-300 LLSTFKPPAY EDVVHRPGTP PPPYTAASGC PSTASSECTC CSSASSCPAH
ENSP00000233615/1-269 FLSTFKPPAY EDVVHRPGTP PPPYTVAPGR PLTASSEQTC CSSSSSCPAH
ENSBTAP00000033108/1-269 LLSAFKPPAY EDVVHRPGTP PPPYTAATGC PSTASSQCTC CSSASSCPAR
bmy_12424T0/1-249 LLSTFKPPAY EDVVHRPGTP PPPYTAASGC PSTASSECTC CSSASSCPAH
BACU010575/1-249 LLSTFKPPAY EDVVHRPGTP PPPYTAASGC PSTASSECTC CSSASSCPAH
201 250
ENSTTRP00000016577/1-300 QEGTNVEDVS SHQSDPPHQE GEPGAGVSPA PTPPFCRYRR LTGDSGIELC
ENSP00000233615/1-269 FEGTNVEGVS SHQSAPPHQE GEPGAGVTPA STPPSCRYRR LTGDSGIELC
ENSBTAP00000033108/1-269 HEGTNVEDVS SHQSAPPHQE GELGAGVSPA PTPPSCRYRR LTGDSGIELC
bmy_12424T0/1-249 QEGTNVEDVS SHQSDPPHQE GEPGAGVSPA PTPPFCRYRR LTGDSGIELC
BACU010575/1-249 QEGTNVEDVS SHQSDPPHQE GEPEAGVSPA PTPPFCRYRR LTGDSGIELC
251 300
ENSTTRP00000016577/1-300 PCPDSSEGEP VKEARASATP PDVEDQS-CA RPLDPVPQV- PLGLASNEGD
ENSP00000233615/1-269 PCPASGEGEP VKEVRVSATL PDLEDYSPCA LPPESVPQIF PMGLSSSEGD
ENSBTAP00000033108/1-269 PCPDSSEGEP VKEARVSATS QEVEDQSPCA QPLNPAPQVS PVGLASSEGD
bmy_12424T0/1-249 PCPDSSEGEP VKEARASATP PDVEDQSPVH GP-------- ----------
BACU010575/1-249 PCPDSSEGEP VKEARASATP PDVEEQSPVH GP-------- ----------
301 350
ENSTTRP00000016577/1-300 IP
ENSP00000233615/1-269 IP
ENSBTAP00000033108/1-269 IP
bmy_12424T0/1-249 --
BACU010575/1-249 --