KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:37 2014 Check: 00 .. Name: ENSP00000295269/1-798 Len: 813 Check: 620 Weight: 1.00 Name: ENSBTAP00000033117/1-797 Len: 813 Check: 8343 Weight: 1.00 Name: ENSTTRP00000010596/1-796 Len: 813 Check: 9691 Weight: 1.00 Name: bmy_09500T0/1-537 Len: 813 Check: 5292 Weight: 1.00 Name: BACU004065/1-797 Len: 813 Check: 7049 Weight: 1.00 // 1 50 ENSP00000295269/1-798 MALQMFVTYS PWNCLLLLVA LECSEASSDL NESANSTAQY ASNAWFAAAS ENSBTAP00000033117/1-797 MGIRGFVPFC PWNWCLLLAT LQCCGASSEL NRSTDSSARR ELNVRYAAAS ENSTTRP00000010596/1-796 MGLQMLVPFG PWSWLFFLVA LKCGGASSDL NESTNASPQH EPDVRFVAAG bmy_09500T0/1-537 ---------- ---------- ---------- ---------- ---------- BACU004065/1-797 MGFQMLVPFG PWNWLFLLVA LRCGGASSDL NESTNSSAQH ELNVRFAAAG 51 100 ENSP00000295269/1-798 SEPEEGISVF ELDYDYVQIP YEVTLWILLA SLAKIGFHLY HRLPGLMPES ENSBTAP00000033117/1-797 SQPAETISVF TLDYDYVQIP YEVTLWILLA SLAKIGFHLN RRLPGLMPES ENSTTRP00000010596/1-796 SEPAETVSVF ALDYDYVQIP YEVTLWILLA SL-KIGFHLS HRLPGLMPES bmy_09500T0/1-537 ---------- ---------- ---------- ---------- ---------- BACU004065/1-797 SEPAETVSVF ALDYNYVQIP YEVTLWILLA SLAKIGFHVY HRLPGLMPES 101 150 ENSP00000295269/1-798 CLLILVGALV GGIIFGTDHK SPPVMDSSIY FLYLLPPIVL EGGYFMPTRP ENSBTAP00000033117/1-797 CLLILVGALV GAVIFGTDHK SPPVMDSSIY FLYLLPPIVL ESGYFMPTRP ENSTTRP00000010596/1-796 CLLILVGALV GAIIFGTDHK SPPVMDSSIY FLYLLPPIVL EGGYFMPTRP bmy_09500T0/1-537 ---------- ---------- ---------- ---------- ---------- BACU004065/1-797 CLLVLVGALV GTIIFGTDHK SPPVMDSSIY FLYLLPPIVL EGGYFMPTRP 151 200 ENSP00000295269/1-798 FFENIGSILW WAVLGALINA LGIGLSLYLI CQVKAFGLGD VNLLQNLLFG ENSBTAP00000033117/1-797 FFENLGSILW WAGLGALLNA FGIGLSLYLI CQVPAFGLGD INLLQNLLFG ENSTTRP00000010596/1-796 FFENIGSILW WAGLGALINA FGIGLSLYLV CQVQAFGLSD VNLLHNLLFG bmy_09500T0/1-537 ---------- ---------- ---------- ---------- ---------- BACU004065/1-797 FFENIGSILW WAGLGALINA FGIGLSLYLI CQVQAFGLSD VNLLQNLLFG 201 250 ENSP00000295269/1-798 SLISAVDPVA VLAVFEEARV NEQLYMMIFG EALLNDGITV VLYNMLIAFT ENSBTAP00000033117/1-797 SLISAVDPVA VLAVFEEARV NEQLYMMIFG EALLNDGISV VLYNILIAFT ENSTTRP00000010596/1-796 SLISAVDPVA VLAVFEEARV NQQLYMMIFG EALLNDGISV VLYNILIAFT bmy_09500T0/1-537 ---------- ---------- ---------- ---------- ---------- BACU004065/1-797 SLISAVDPVA VLAVFEEARV NEQLSMMIFG EALLNDGISV VLYNILIAFT 251 300 ENSP00000295269/1-798 KMHKFEDIET VDILAGCARF IVVGLGGVLF GIVFGFISAF ITRFTQNISA ENSBTAP00000033117/1-797 KMHKFEDIEP VDILAGCARF VIVGCGGAFF GVIFGFISAF ITRFTQNISA ENSTTRP00000010596/1-796 KMHKFEDIEP VDILAGCARF IIVGCGGVFF GVIFGFISAF ITRFTQNISA bmy_09500T0/1-537 -MHKFEDIEP VDILAGCARF IIVGCGGVFF GVIFGFISAF ITRFTQNISA BACU004065/1-797 KMHKFEDIEP VDILAGCARF IIVGCGGVFF GVIFGFISAF ITRFTQNISA 301 350 ENSP00000295269/1-798 IEPLIVFMFS YLSYLAAETL YLSGILAITA CAVTMKKYVE ENVSQTSYTT ENSBTAP00000033117/1-797 IEPLIVFMFS YLSYLVAETL YLSGILAITA CAVTMKKYVE ENVSQTSYTT ENSTTRP00000010596/1-796 IEPLIVFMFS YLSYLVAETL YLSGILAITA CAVTMKKYVE ENVSQTSYTT bmy_09500T0/1-537 IEPLIVFMFS YLSYLAAETL YLSGILAITA CAVTMKKYVE ENVSQTSYTT BACU004065/1-797 IEPLIVFMFS YLSYLVAETL YLSGILAITA CAVTMKKYVE ENVSQTSYTT 351 400 ENSP00000295269/1-798 IKYFMKMLSS VSETLIFIFM GVSTVGKNHE WNWAFICFTL AFCQIWRAIS ENSBTAP00000033117/1-797 IKYFMKMLSS VSETLIFIFM GVSTIGKNHE WNWAFICFTL VFCQIWRAIS ENSTTRP00000010596/1-796 IKYFMKMLSS VSETLIFMFM GVSTVGKNHE WNWAFVCFTL AFCQIWRAIS bmy_09500T0/1-537 IKYFMKMLSS VSETLIFIFM GVSTIGKNHE WNWAFVCFTL AFCLIWRAIS BACU004065/1-797 IKYFMKMLSS VSETLIFIFM GVSTIGKNHE WNWAFVCFTL AFCQIWRAIS 401 450 ENSP00000295269/1-798 VFALFYISNQ FRTFPFSIKD QCIIFYSGVR GAGSFSLAFL LPLSLFPRKK ENSBTAP00000033117/1-797 VFVLFYVSNQ FRTFPFSIKD QCVIFYSGVR GAGSFSLAFL LPLSLFPRKK ENSTTRP00000010596/1-796 VFALFYISNQ FRTFPFSIKD QCIIFYSGVR GAGSFSLAFL LPLSLFPRKK bmy_09500T0/1-537 VFALFYISNQ FRTFPFSIKD QCIIFYSGVR GAGSFSLAFL LPLSLFPRKK BACU004065/1-797 VFALFYISNQ FRTFPFSIKD QCIIFYSGVR GAGSFSLAFL LPLSLFPRKK 451 500 ENSP00000295269/1-798 MFVTATLVVI YFTVFIQGIT VGPLVRYLDV KKTNKKESIN EELHIRLMDH ENSBTAP00000033117/1-797 LFVTATLVVI YFTVFIQGIT VGPLVRYLDV RKTNKKESIN EELHTRLMDH ENSTTRP00000010596/1-796 MFVTATLVVI YFTVFIQGIT IGPLVRYLDV RKTNKKESIN EELHTRLMDH bmy_09500T0/1-537 MFVTATLVVI YFTVFIQGIT IGPLVRYLDV RKTNKKESIN EELHTRLMDH BACU004065/1-797 MFVTATLVVI YFTVFIQGIT IGPLVRYLDV RKTNKKESIN EELHTRLMDH 501 550 ENSP00000295269/1-798 LKAGIEDVCG HWSHYQVRDK FKKFDHRYLR KILIRKNLPK SSIVSLYKKL ENSBTAP00000033117/1-797 LKAGIEDVCG QWSHYQVRDK FKKFDHKYLR KILIRKNLPK SSLVSLYKKL ENSTTRP00000010596/1-796 LKAGIEDVCG QWSHYQVRDK FKKFDHKYLR KILIRENLPK SSIVSLYKKL bmy_09500T0/1-537 LKAGIEDVCG QWSHYQVRDK FKKFDHKYLR KILIRENLPK SSIVSLYKKL BACU004065/1-797 LKAGIEDVCG HWSHYQVRDK FKKFDHKYLR KILIRENLPK SSIVSLYKKL 551 600 ENSP00000295269/1-798 EMKQAIEMVE TGILSSTAFS IPHQ------ --------AQ RIQGIKRLSP ENSBTAP00000033117/1-797 EMKQAIEMVE SGVLSSTAFS TPRR------ --------VQ KTQETKRLSP ENSTTRP00000010596/1-796 EMKQAIEMAE TGILSSTAFS MPHQ------ --------AQ RIQETKRLSP bmy_09500T0/1-537 EMKQAIEMAE TGILSSTAFS IPHQWKNNAW LPSNDVSRAQ RIQETKRLSP BACU004065/1-797 EMKQAIEMAE TGILSSTAFS IPHQ------ --------AQ RIQETKRLCP 601 650 ENSP00000295269/1-798 EDVESIRDIL TSNMYQVRQR TLSYNKYNLK PQTSEKQAKE ILIRRQNTLR ENSBTAP00000033117/1-797 EDVESMRDIL TRNMYQVRQR TLSYNKYNLQ PQTSEKQAKE ILIRRRNTFR ENSTTRP00000010596/1-796 EDVESMRDIL THNMYQVRQR TLSYNKYNLK PQTSEKQAKE ILIRRQNTFR bmy_09500T0/1-537 EDVESMRDIL THNMYQVRQR TLSYNKYNLK PQTSEKQAKE ILIRRQNTFR BACU004065/1-797 EDVESMRDIL THNMYQVRQR TLSYNKYNLK PQTSEKQAKE ILIRRQNTFR 651 700 ENSP00000295269/1-798 ESMRKGHSLP WGKPAGTKNI RYLSYPYGNP QSAGRDTRAA GFSDDDSSDP ENSBTAP00000033117/1-797 ESVKKGHSLP WGKPAGTKNI RYLSFPYSKP LPAGRDMKVA EFTDHDGSDS ENSTTRP00000010596/1-796 ESARKGHSLP WGKPAGTRNI RYLSFPYSRP QPAGRDVRVA EFTDHDGSDA bmy_09500T0/1-537 ESMRKGHSLP WGRTINNCE- ---------- ---------- --KDHDGSDA BACU004065/1-797 ESTRKGHSLP WGRTAGTKNI RYLSFPYSHP QPAGRDVRVA EFTDHDGSDA 701 750 ENSP00000295269/1-798 GSPSITFSAC SRIGSLQK-Q EAQEIIPMKS LHRGRKAFSF GYQRNTSQEE ENSBTAP00000033117/1-797 ELPPITFNTH SPTGTIQERR WTPEVIPMKR LHGAGTPLHF GYRRNAGREE ENSTTRP00000010596/1-796 EVPTIMFNTH SPTGSLQEGQ RTQEIIPMKN LHRGGKPAHL GYQRNRAQEE bmy_09500T0/1-537 EVPSIMFNTH SPTGSLQEGR RTQEIIPMKS LHRGGKPPHL GYQRNRSQEE BACU004065/1-797 EVPSIMFNTH SPTGSLQEGR RTQEIIPMKS LHRGGKPPHL GYQRNRSQEE 751 800 ENSP00000295269/1-798 YLGGVRRVAL RPKPLFHAVD EEGESGGESE GKASLVEVRS RWTADHGHGR ENSBTAP00000033117/1-797 HLGRGGRAIL RPKPLFHAVD EEFESEEESK EETP--AFGS LLSSELRPGG ENSTTRP00000010596/1-796 QLGGGRRVVL RPKPLFHAVD EDFESGEESE EEAS--AIGS RWSAEHRPGR bmy_09500T0/1-537 QLGRGRRAVL RPKPLFHXVD EEFESGEESE EEAS--AIGS RWSAEHRPGR BACU004065/1-797 QLGRGRRAVL RPKPLFHAVD EEFESGEESE EEAS--AIGS RWSTEHRPGR 801 850 ENSP00000295269/1-798 DHHRSHSPLL QKK ENSBTAP00000033117/1-797 DCNVSHSPLL QRK ENSTTRP00000010596/1-796 DLQGSHSPLL QSK bmy_09500T0/1-537 DLHRSHSPLL QRK BACU004065/1-797 DLHRSHRPLL QRK