KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:42:39 2014 Check: 00 .. Name: ENSP00000319726/1-464 Len: 465 Check: 6062 Weight: 1.00 Name: ENSBTAP00000033173/1-463 Len: 465 Check: 3433 Weight: 1.00 Name: ENSTTRP00000016365/1-460 Len: 465 Check: 1873 Weight: 1.00 Name: bmy_10219T0/1-465 Len: 465 Check: 2901 Weight: 1.00 Name: BACU003470/1-465 Len: 465 Check: 3212 Weight: 1.00 // 1 50 ENSP00000319726/1-464 MDGTEGSAGQ PGPAERSHRS SVSSVGARAA DVLVYLADDT VVPLAVENLP ENSBTAP00000033173/1-463 MDGPEDSTGQ PGPADRSHRS SVSSVGARAA DVLVYLADDS MVPLAVENLP ENSTTRP00000016365/1-460 MDGTEGNGGQ PGPADRSHRS SVSSVGARAA DVLVYLADDT MVPLAVENLP bmy_10219T0/1-465 MDGTEDNAGQ PGLADRSHRS SVSSVGARAA DVLVYLADDT VVPLAVENLP BACU003470/1-465 MDGTEDNAGQ PGPADRSHRS SVSSVGARAA DVLVYLADDT VVPLAMENLP 51 100 ENSP00000319726/1-464 SLSAHELHRA VREVLQLPDI ALDVFALWLV SPLLEVQLKP KHQPYKLGRQ ENSBTAP00000033173/1-463 SLSAHELHRA IREVLQLPDI ALDAFALWLV SPLLEVQLKP KHQPYKLGRQ ENSTTRP00000016365/1-460 SLTAHELHQA VREVLQLPDV ALDAFALWLV SPLLEVQLKP KHQPYKLGRQ bmy_10219T0/1-465 SLTAHELHQT VREVLQLPDV ALDAFALWLV SPLLEVQLKP KHQPYKLGRQ BACU003470/1-465 SLTAHELHQT VREVLQLPDV ALDAFALWLV SPLLEVQLKP KHQPYKLGRQ 101 150 ENSP00000319726/1-464 WPELLLRFTS APDDDVAMDE PFLQFRRNVF FPKRRELQIH DEEVLRLLYE ENSBTAP00000033173/1-463 WQELLLRFTD APDDDVAMDE PSLQFRRNVF FPKWRELQIH DKEVLRLLYE ENSTTRP00000016365/1-460 WQELLLRFTD APDDDVAMDE PSLQFRRNVF FPKRRELQIH DKEVLRLLYE bmy_10219T0/1-465 WQDLLLRFTD APDDDVAMDE PSLQFRRNVF FPKRRELQIH DKEVLRLLYE BACU003470/1-465 WQELLLRFTD APDDDVAMDE PSLQFRRNVF FPKRRELQIH DKEVLRLLYE 151 200 ENSP00000319726/1-464 EAKGNVLAAR YPCDVEDCEA LGALVCRVQL GPYQPGRPAA CDLREKLDSF ENSBTAP00000033173/1-463 EAKGNVLASR YPCDVEDCEA LGALVCRVQL GPYQPGQPTA CALREKLDSF ENSTTRP00000016365/1-460 EAKGNVLAAR YPCDVEDCEA LGALVCRVQF GPYQPGQPTA CALREKLDSF bmy_10219T0/1-465 EAKGNVLAAR YPCDVEDCEA LGALVCRVQL GPYQPGQPTA CALREKLDSF BACU003470/1-465 EAKSNVLAAR YPCDVEDCEA LGALVCRVQL GPYQPGQPTA CALREKLDSF 201 250 ENSP00000319726/1-464 LPAHLCKRGQ SLFAALRGRG ARAGPGEQGL LNAYRQVQEV S-SDGGCEAA ENSBTAP00000033173/1-463 LPAHLCKRGH GLFAALRGRG AKAGTGEQGL LNAYRRVQEA AGSDGEREAS ENSTTRP00000016365/1-460 LPAHLCKRGH GLFAALRGRG TKAGTGEQGL LNAYRRVKEV AGSESEHEAS bmy_10219T0/1-465 LPAHLCKRGH GLFAALRGRG TKAGTGEQGL LNAYSRVKEV AGSESEHEAS BACU003470/1-465 LPAHLCKRGH GLFAALRGRG TKAGTGEQGL LNAYSRVKEV AGSESEHEAS 251 300 ENSP00000319726/1-464 LGTHYRAYLL KCHELPFYGC AFFHGEVDKP AQGFLHRGGR KPVSVAISLE ENSBTAP00000033173/1-463 LSPHYRAYLL KCHELPFYGC AFFHGEIDKP AQGFLHRGGR KPVSVAISLD ENSTTRP00000016365/1-460 LSPHYRAYLL KCHELPFYGS AFFHGEIDKP AQGFLHRGGQ KPVSVAISLE bmy_10219T0/1-465 LSPHYRAYLL KCHELPFYGS AFFHGEVDKP AQGFLHRGGQ KPVSVAISLE BACU003470/1-465 LSPHYRAYLL KCHELPFYGS AFFHGEIDKP AQGFLHRGGQ KPVSVAISLE 301 350 ENSP00000319726/1-464 GVHVIDSREK HVLLGLRFQE LSWDHTSPEE EEPILWLEFD GDSEGTPVNK ENSBTAP00000033173/1-463 GVHVIDCREK HVLLGLRFQE LSWDHTSPEE EESVLWLEFD GDNEGTPVNK ENSTTRP00000016365/1-460 GVHVIDSREK HVLLGLRFQE LSWDHTSPEE EESVLWLEFD GDNEGTPVNK bmy_10219T0/1-465 GVHVIDSREK HVLLGLRFQE LSWDHTSPEE EESALWLEFD GDSEGTPVNK BACU003470/1-465 GVHVIDSREK HVLLGLRFQE LSWDHTSPEE EESALWLEFD GDSEGTPVNK 351 400 ENSP00000319726/1-464 LLKIYSKQAE LMSSLIEYCI ELSQAAEPAG PQDSATGSPS DPSSSLAPVQ ENSBTAP00000033173/1-463 LLKIYSKQAE LMSSLIEYCI ELSQAAEPAA SQE--AGPTS ASGSSPPPHQ ENSTTRP00000016365/1-460 LLKIYSKQAE LMSSLIEYCI ELSQAAEPA- PQESAAGPAS APGSSPPPTQ bmy_10219T0/1-465 LLKVYSKQAE LMSSLIEYCI ELSQAAEPAA PQESAACAAS APGNSPPATQ BACU003470/1-465 LLKVYSKQAE LMSSLIEYCI ELSQAAEPAT PQESAAGAAS APGNSPPATQ 401 450 ENSP00000319726/1-464 RPKLRRQGSV VSSRIQHLST IDYVEDGKGI RRVKPKRTTS FFSRQLSLGQ ENSBTAP00000033173/1-463 RPQLRRQGSV VCSRIQHLST IDYVEEGETI KRVKPKRTTS FFSRQLSLGQ ENSTTRP00000016365/1-460 HPQLRRQGSV VCSRIQHLST IDYVEEGEQI KRVKPKRSTS FFSRQLSLGQ bmy_10219T0/1-465 RPQLRRQGSV VCSRIQYLST IDYVEEGEQI KRVKPKRSTS FFSRQHSLGQ BACU003470/1-465 RPQLRRQGSV VCSRIQHLST IDYVEEGEQI KRVKPKRSTS FFSRQLSLGQ 451 500 ENSP00000319726/1-464 GSYTVVQPGD SLEQG ENSBTAP00000033173/1-463 GSYTVVQPAD SLEQG ENSTTRP00000016365/1-460 GTYAVVQPTE S---- bmy_10219T0/1-465 GSYTVVQPTE SLEQG BACU003470/1-465 GSYTVVQPTE SLEQG