KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:43:05 2014 Check: 00 .. Name: BACU000751/1-239 Len: 347 Check: 1968 Weight: 1.00 Name: ENSTTRP00000013206/1-324 Len: 347 Check: 4242 Weight: 1.00 Name: bmy_12876T0/1-140 Len: 347 Check: 5319 Weight: 1.00 Name: ENSBTAP00000033245/1-259 Len: 347 Check: 59 Weight: 1.00 // 1 50 BACU000751/1-239 MRCRSPGAYF GFLCSLSEDP VEALLEPAR- CEMRASSSRP GTSRRTAHAR ENSTTRP00000013206/1-324 -----MVDYY EVLGVQRHAS AEDIKKAYRK LALKWHPDKN PENKEEAERK bmy_12876T0/1-140 -----MVDYY EVLGVHRHAS AEDIKKAYRK LALKWHPDKN PENKEEAERK ENSBTAP00000033245/1-259 -----MVDYY EVLGVQRHAS AEDIKKAYRK LALKWHPDKN PENKEEAERK 51 100 BACU000751/1-239 LRPVLSGVAD EDAFAEECRR RGQHALPAQP ASTSARSLKS HRPASVPKHA ENSTTRP00000013206/1-324 FKQ----VAE AYEVLSDAKK RDIYDKYGKE GLNGGGGGGS HFDGPFQFGF bmy_12876T0/1-140 FKQ----VAE AYEVLSDAKK RDIYDKYGKE GLNSGGGGGS HFDSACGFGF ENSBTAP00000033245/1-259 FKQ----VAE AYEVLSDAKK RDIYDRYGKE GLNGGGGGGS HFDSPFEFGF 101 150 BACU000751/1-239 PHPPGED--- EDEPGRHRAS SSWEPPAAFP AAPSPRPSSL DAARGALSPP ENSTTRP00000013206/1-324 TFRNPDDVFR EFFGGRD--- -----PFSFD FFEDPFEDFF GNRRG----P bmy_12876T0/1-140 TFRNPDDVFR EFFGGRD--- -----PFSFD FFG------- ---------- ENSBTAP00000033245/1-259 TFRNPEDVFR EFFGGRD--- -----PFSFD FFGVLGDFHF QALRI----Y 151 200 BACU000751/1-239 SRPPSSGTER AWRTLA---- ---------- ---------- ---------- ENSTTRP00000013206/1-324 RGSRNRGTGS FFSTFGGFPS FGGGFSSFDT GFTSFGSLGH GGLTSFSSTA bmy_12876T0/1-140 ---KFIILGR WLHNVS---- ---------- ---------- ---------- ENSBTAP00000033245/1-259 TREKKLLHGY YMYEVTMQPA --GGFE---- ---------- ---------- 201 250 BACU000751/1-239 ---------- ---------- ---------- -------QEE SSGRTGSWG- ENSTTRP00000013206/1-324 FGGSGMGNYK SISTSTKVVN GRKITTKRIV ENGQERVEVE EDGQLKSLTI bmy_12876T0/1-140 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033245/1-259 ---------- ---------- --EAASEELE PEEEAVAESA SEEDSEALDV 251 300 BACU000751/1-239 --------SA EDDRRAEQPG HGTSQAMSIL RPMATADCPA PPPNSRRPHV ENSTTRP00000013206/1-324 NGVADEDAFA EECRRRGQHA LPGQPASTSA RPLKSQRPAS VPKHA--PHP bmy_12876T0/1-140 --------VT HEDRHT---- ---------- ---------- ---------- ENSBTAP00000033245/1-259 VSSEELDLFS DDEPSEGASL GGGEPPSEDL EFISSEDEAS PGDPE--ELL 301 350 BACU000751/1-239 PERGSTSQPG TCEEIESLQT P-------SI ---------- ------- ENSTTRP00000013206/1-324 PGEGEDHRAA AWEPPAAFPA GFKEGGKRKK QKQREELKKK KSTKGRP bmy_12876T0/1-140 ---------- ---------- -------RSV ---------- ------- ENSBTAP00000033245/1-259 EECEELLSED SGPEPEALPL PRGRPAEQSL ---------- -------