KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:07 2014 Check: 00 .. Name: bmy_12907T0/1-452 Len: 474 Check: 6182 Weight: 1.00 Name: ENSTTRP00000000808/1-452 Len: 474 Check: 4706 Weight: 1.00 Name: ENSP00000391137/1-467 Len: 474 Check: 6235 Weight: 1.00 Name: BACU000719/1-465 Len: 474 Check: 5019 Weight: 1.00 Name: ENSBTAP00000033313/1-464 Len: 474 Check: 6598 Weight: 1.00 // 1 50 bmy_12907T0/1-452 -----MPGR- --RSSPPHWG HRLRCLRSAS ACRVWGPQSC PAWEPPQPSP ENSTTRP00000000808/1-452 -----MPGR- --RSSPPHWG HRLGCLRSAS ACRVWGPRSC PAREAPQRSP ENSP00000391137/1-467 MLMSWSPEEC KGQGEPLDDR HPL-CARLVE K----PSRGS EEHLKSGPGP BACU000719/1-465 --MSWSPEEC REQGEPSGDR HAL-CARLVE K----PSGGS AERLESGPGP ENSBTAP00000033313/1-464 ALMSWSPEEC RGQGEPPGDR HAL-CARLVE K----PHGGS PE---SGPGP 51 100 bmy_12907T0/1-452 LLCRD----- MALQNALYTG DLARLQELFP PHSTA---DL LLESRAAEPR ENSTTRP00000000808/1-452 LLCRD----- MALQNALYTG DLARLQELFP PHSTA---DL LLESRAAEPR ENSP00000391137/1-467 IVTRTASGPA LAFWQAVLAG DVGCVSRILA DSSTGLAPDS VFDTSDPE-R BACU000719/1-465 ILTRKASGPA LAFWQAVLAG AVGSVSCILA DSSTGLAPDS VFDTSDPE-R ENSBTAP00000033313/1-464 IVTRTASGPA LAFWQAVLAG DVGSVSRILA DSSNGLAPDS IFDTSDPE-R 101 150 bmy_12907T0/1-452 W------SCH QRGIWSLTYK EELTTPLHVA ASRGHTEILR LLLRRRARPD ENSTTRP00000000808/1-452 W------ISH QRGLWSLTYK EELTTPLHVA ASRGHTEILQ LLLRRRARPD ENSP00000391137/1-467 WRDFRFNIRA LR-LWSLTYE EELTTPLHVA ASRGHTEVLR LLLRRRARPD BACU000719/1-465 WRDFRFNICA LR-IWSLTYK EELTTPLHVA ASRGHTEILR LLLRRRARPD ENSBTAP00000033313/1-464 WRDFRFNIRA LR-LWSLTYE EELTTPLHVA ASRGHVEILR LLLRRRARPD 151 200 bmy_12907T0/1-452 SAPGGRTALH EACAAGHAAC VHMLLVAGAD PNIPDQDGKR PLHLCGEAGS ENSTTRP00000000808/1-452 SAPGGRTALH EACAAGHAAC AHVLLVAGAD PNIPDQDGKR PLHLCGAAGS ENSP00000391137/1-467 SAPGGRTALH EACAAGHTAC VHVLLVAGAD PNIADQDGKR PLHLCRGPGT BACU000719/1-465 SAPGGRTALH EACAAGHAAC VHMLLVAGAD PNIPDQDGKH PLHLCGEAGS ENSBTAP00000033313/1-464 SAPGGRTALH EACAAGHAAC VHVLLVAGAD PNIPDQDGRR PLHLCGGAGS 201 250 bmy_12907T0/1-452 LECAELLLRF GAKVDGRSEE EEETPLHVAA RLGHVELADL LLRRGACSNA ENSTTRP00000000808/1-452 LECAELLLRF GAKVDGRSEE EEETPLHVAA RLGHVELADL LLRRGACSNA ENSP00000391137/1-467 LECAELLLRF GARVDGRSEE EEETPLHVAA RLGHVELADL LLRRGACPDA BACU000719/1-465 RECAELLLRF GAKVDGRSEE EEETPLHVAA RLGHVELADL LLRRGACSNA ENSBTAP00000033313/1-464 LECADLLLRF GAKVDGRSEE EEETPLHVAA RLGHVELADL LLRRGACPDA 251 300 bmy_12907T0/1-452 RDAEGCTPLL AACDARCTSP ADAEATTTHC LQLCHLLLSA GADADAADQD ENSTTRP00000000808/1-452 RDAESWTPLL AACDARCTSP ADAKATTAHC LQLCRLLLSA GADADAADQD ENSP00000391137/1-467 RNAEGWTPLL AACDVRCQSI TDAEATTARC LQLCSLLLSA GADADAADQD BACU000719/1-465 RDAEGCTPLL AACDARCTSP ADAEATTTHC LQLCRLLLSA GADADAADQD ENSBTAP00000033313/1-464 RDVEGWTPLL AACDARCMSP ADAEATTARC LQLCRLLLSA GADADAADKD 301 350 bmy_12907T0/1-452 RRRPLHLACR RGHADVVELL LSCGSSVNAM DYGGHMALHY ALQGPAAALA ENSTTRP00000000808/1-452 RRRPLHLACR RGHADVVELL LSCGVSANAM DYGGHTALHY ALQGPAAALA ENSP00000391137/1-467 KQRPLHLACR RGHAAVVELL LSCGVSANTM DYGGHTPLHC ALQGPAAALA BACU000719/1-465 RQQPLHLACR RGHADVVELL LSCGSSVNAM DYGGHMALHY ALQGPAAALA ENSBTAP00000033313/1-464 RQRPLHLACR RGHADVVELL LARGVGANAM DYGGHTALHC ALQGPAAALA 351 400 bmy_12907T0/1-452 QSPERTVRAL LNHGAVRVWP GALPKVLERW CTSPRTIEVL MNTYSIMQLP ENSTTRP00000000808/1-452 QGPEHTVRAL LNHGAVRVWP GALPKVLERW CTSPRTIEVL MNTYSIMQLP ENSP00000391137/1-467 QSPEHVVRAL LNHGAVRVWP GALPKVLERW STCPRTIEVL MNTYSVVQLP BACU000719/1-465 QSPERTVRAL LNHGAVRVWP GALPKVLERW CTSPRTIEVL LNTYSIMQLP ENSBTAP00000033313/1-464 QSPERTVRAL LNHGAVRVWP GALPKVLERW CTSPRTIEVL MNTYSVVKLP 401 450 bmy_12907T0/1-452 EEAVGLVPPE TLQKYHHFYS SLLALXRQPR SLQHLSRCAL RAHLAACLPH ENSTTRP00000000808/1-452 EEAVGLVPPE TLQKYHRFYS SLLALVRQPR SLQHLSRCAL RAHLAACLPH ENSP00000391137/1-467 EEAVGLVTPE TLQKHQRFYS SLFALVRQPR SLQHLSRCAL RSHLEGSLPQ BACU000719/1-465 EEAVGLVPPE TLQKYHHFYS SLLALARQPR SLQHLSRCAL RALLEACLPH ENSBTAP00000033313/1-464 EDAVGLVPPE TLQKHHRFYS SLFALVRQPR SLQHLSRCAL RAHLAACLPH 451 500 bmy_12907T0/1-452 ALPRLPLPAR LLRYLQLDFE DVLY ENSTTRP00000000808/1-452 ALPRLPLPAR LLRYLQLDFE DVLY ENSP00000391137/1-467 ALPRLPLPPR LLRYLQLDFE GVLY BACU000719/1-465 ALPRLPLPAR LLRYLQLDFE DVLY ENSBTAP00000033313/1-464 ALPRLPLPPR LLRYLQLDFE DVLY