KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:07 2014 Check: 00 .. Name: bmy_01549T0/1-362 Len: 588 Check: 3316 Weight: 1.00 Name: ENSBTAP00000033316/1-486 Len: 588 Check: 5538 Weight: 1.00 Name: ENSTTRP00000004609/1-584 Len: 588 Check: 9793 Weight: 1.00 Name: ENSP00000360280/1-555 Len: 588 Check: 3744 Weight: 1.00 Name: BACU018955/1-566 Len: 588 Check: 5872 Weight: 1.00 // 1 50 bmy_01549T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033316/1-486 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004609/1-584 MSTETELQVA VKTSAKKDSR KKGQDRSEAT LIKRFKGEGV RYKAKLIGID ENSP00000360280/1-555 MSTETELQVA VKTSAKKDSR KKGQDRSEAT LIKRFKGEGV RYKAKLIGID BACU018955/1-566 ---------- ---------- --GQDRSEAT LIKRFKGEGV RYKAKLIGID 51 100 bmy_01549T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033316/1-486 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004609/1-584 EVSAARGDKL CQDSMMKLKG VVAGARSKGE HKQKIFLTIS FGGIKIFDEK ENSP00000360280/1-555 EVSAARGDKL CQDSMMKLKG VVAGARSKGE HKQKIFLTIS FGGIKIFDEK BACU018955/1-566 EVSAARGDKL CQDSMMKLKG VVAGARSKGE HKQKIFLTIS FGGIKIFDEK 101 150 bmy_01549T0/1-362 ---------- ---------M TEPRS----- KQEGNHKL-- ---------- ENSBTAP00000033316/1-486 --ALQHHHAV HEISYIAKDI TDHRAFGYVC GKEGNHRFVA IKTAQAAEPV ENSTTRP00000004609/1-584 TGALQQHHAV HEISYIAKDI TDHRAFGYVC GKEGNHRFVA IKTAQAAEPV ENSP00000360280/1-555 TGALQHHHAV HEISYIAKDI TDHRAFGYVC GKEGNHRFVA IKTAQAAEPV BACU018955/1-566 TGALQQHHAV HEISYIAKDI TDHRAFGYVC GKEGNHRFVA IKTAQAAEPV 151 200 bmy_01549T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033316/1-486 ILDLRDLFQL IYELKQREEL EKKAQKDKQC EQAVYQTILE EDVEDPVYQY ENSTTRP00000004609/1-584 ILDLRDLFQL IYELKQREEL EKKAQKDKQC EQAVYQTILE EDVEDPVYQY ENSP00000360280/1-555 ILDLRDLFQL IYELKQREEL EKKAQKDKQC EQAVYQTILE EDVEDPVYQY BACU018955/1-566 ILDLRDLFQL IYELKQREEL EKKAQKDKQC EQAVYQTILE EDVEDPVYQY 201 250 bmy_01549T0/1-362 ---------- ---------- ---------- ---------- QNGCEFEDFE ENSBTAP00000033316/1-486 IVFEAGHEPI RDPETEENIY QVPTSQKKEG VYDVPKSQPV SNGRAFEDFD ENSTTRP00000004609/1-584 IVFEAGHEPI RDPEMEENIY QVPTSQKKEG VYDXXXXXXX XNSCTFEDFE ENSP00000360280/1-555 IVFEAGHEPI RDPETEENIY QVPTSQKKEG VYDVPKSQPV S--------- BACU018955/1-566 IVFEAGHEPI RDPEMEENIY QVPTSQKKEG VYDVPKSQPV SNGCAFEDFE 251 300 bmy_01549T0/1-362 ERFAAATPNR NLPMDFDEIF EATKAVTQLE LFGDMSTPPD ITSPPTPATP ENSBTAP00000033316/1-486 ERFAAATPNR NLPMDFDEIF EATKAVTQLE LFGDMSTPPD ITSPPTPATP ENSTTRP00000004609/1-584 ERFAAATPNR KLPMDFDEIF EATKAVTQLE LFGDMSTPPD ITSPPTPATP ENSP00000360280/1-555 ---------- ---------- ----AVTQLE LFGDMSTPPD ITSPPTPATP BACU018955/1-566 ERFAAATPNR NLPMDSDEIF EATKAVTQLE LFGDMSTPPD ITSPPTPATP 301 350 bmy_01549T0/1-362 GDAFIPSSSQ TLPASADMFS SVPFGTAAVP SGYVAMGAVL PSFWGQQPLV ENSBTAP00000033316/1-486 GDAFIPSSSQ TLPASADVCG SLPFGTAAVP SGYVAMGAVL PSFWGQQPLV ENSTTRP00000004609/1-584 GDAFIPSSSQ TLPASADMFG SVPFGTAAVP SGYVAMGAVL PSFWGQQPLV ENSP00000360280/1-555 GDAFIPSSSQ TLPASADVFS SVPFGTAAVP SGYVAMGAVL PSFWGQQPLV BACU018955/1-566 GDAFIPSSSQ TLPASADMFG SVPFGTAAVP SGYVAMGAVL PSFWGQQPLV 351 400 bmy_01549T0/1-362 QQQIAMGAQP PVAQVMPGAQ PIAWGQPGLF PATQQPWPTV AGQFPPAAFM ENSBTAP00000033316/1-486 QQQIAMGAQP PVAQVMPGAQ PIAWGQPGLF PAAQQPWPAV AGQFPPAAFM ENSTTRP00000004609/1-584 QQQIAMGAQP AVAQVMPGAQ PIAWGQPGLF PATQQPWPTV AGQFPPAAFM ENSP00000360280/1-555 QQQMVMGAQP PVAQVMPGAQ PIAWGQPGLF PATQQPWPTV AGQFPPAAFM BACU018955/1-566 QQQIAMGPQP PVAQVMPGAQ PIAWGQPALF PATQQPWPTV AGQFPPAAFM 401 450 bmy_01549T0/1-362 PTQTVMPLPA AMFQGPLTPL ATVPATSDSA RSSPQTDKPR QKMGKEMFKD ENSBTAP00000033316/1-486 PTQTVMPLPA AMFQGPLTPL ATIPATGDSA RSSPQTDKPR QKMGKEMFKD ENSTTRP00000004609/1-584 PTQTVMPLPA AMFQGPLTPL ATVPATGDSA RSSPQTDKPR QKMGKEMFKD ENSP00000360280/1-555 PTQTVMPLPA AMFQGPLTPL ATVPGTSDST RSSPQTDKPR QKMGKETFKD BACU018955/1-566 PTQTVMPLPA AMFQGPLTPL ATVPATSDSA RSSPQTDKPR QKMGKEMFKD 451 500 bmy_01549T0/1-362 FQMAQPPPVP SRKPDQPSLT CTSEAFSSYF NKVGVAQDTD DCDDFDISQL ENSBTAP00000033316/1-486 FQMAQPPPVP SRKPDQPSLT CTSEAFSSYF NKVGVAQDTD DCDDFDISQL ENSTTRP00000004609/1-584 FQMAQPPPVP SRKPDQPSLT CTSEAFSSYF NKVGVAQDTD DCDDFDISQL ENSP00000360280/1-555 FQMAQPPPVP SRKPDQPSLT CTSEAFSSYF NKVGVAQDTD DCDDFDISQL BACU018955/1-566 FQMAQPPPVP SRKPDQPSLT CTSEAFSSYF NKVGVAQDTD DCDDFDISQL 501 550 bmy_01549T0/1-362 NLTPVTSTTP STNSPPTPAP RQSSPSKSSA SHASDPTTDD IFEEGFESPS ENSBTAP00000033316/1-486 NLTPVTSTTP STNSPPTPAP RQSSPSKSSA SHASDPTADD IFEEGFESPS ENSTTRP00000004609/1-584 NLTPVTSTTP STNSPPTPAP RQSSPSKSSA SHASDPTTDD IFEEGFESPS ENSP00000360280/1-555 NLTPVTSTTP STNSPPTPAP RQSSPSKSSA SHASDPTTDD IFEEGFESPS BACU018955/1-566 NLTPVTSTTP STNSPPTPAP RQSSPSKSSA SHASDPTTDD IFEEGFESPS 551 600 bmy_01549T0/1-362 KSEEQEAPDG SQASSNSDPF GEPSGEPSGD NISPQAGS ENSBTAP00000033316/1-486 KSEEQEAPDG SQASSNSDPF GEPSGEPSGD NISPQAGS ENSTTRP00000004609/1-584 KSEEQEAPDG SQASSNSDPF G----EPSGD NISPQAGS ENSP00000360280/1-555 KSEEQEAPDG SQASSNSDPF GEPSGEPSGD NISPQAGS BACU018955/1-566 KSEEQEAPDG SQASSNSDPF GEPSVEPSGD NISPQAGS