KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:08 2014 Check: 00 .. Name: bmy_09414T0/1-644 Len: 732 Check: 4844 Weight: 1.00 Name: ENSP00000360252/1-728 Len: 732 Check: 413 Weight: 1.00 Name: ENSBTAP00000033333/1-730 Len: 732 Check: 5965 Weight: 1.00 Name: BACU000215/1-686 Len: 732 Check: 3693 Weight: 1.00 Name: ENSTTRP00000004416/1-728 Len: 732 Check: 1056 Weight: 1.00 // 1 50 bmy_09414T0/1-644 ---------- ---------- ---------- ---------- --MAQVLHQI ENSP00000360252/1-728 MEETQPPPQP KLPLCDSLMI WLQTFNTASP CQDVKQLTSG VAMAQVLHQI ENSBTAP00000033333/1-730 MEETQPLSQS ELPLCDSLII WLQTFNTAAP CQDVKQLTSG VAMAQVLHQI BACU000215/1-686 ---------- ---------- ---------- ---------- --MAQVLHQI ENSTTRP00000004416/1-728 MEETQPLPQS ELPLCDSLII WLQTFNTAAP CQDVKQLTNG VAMAQVLHQI 51 100 bmy_09414T0/1-644 DVAWFNESWL SRIKEDIGDN WRIKASNLKK VLQGIMGYYN EFLGQQISEE ENSP00000360252/1-728 DAAWFNESWL SRIKEDVGDN WRIKASNVKK VLQGIMSYYH EFLGQQISEA ENSBTAP00000033333/1-730 DVAWFDEPWL SRIKEDTGDN WRIKASNLKK VLQGIMSYYN EFLGQQISEE BACU000215/1-686 DVAWFNESWL SRIKEDVGDN WRIKASNLKK VLQGIMGYYN EFLGQQISEE ENSTTRP00000004416/1-728 DVAWFNESWL SRIKEDIGDN WRIKASNLKK VLQGIMGYYN EFLGQQISEE 101 150 bmy_09414T0/1-644 LIPDLNQITE CSDSVELGRL LQLILGCAVN CEKKQEHIQN IMTLEESVQH ENSP00000360252/1-728 LIPDLNQITE CSDPVELGRL LQLILGCAIN CEKKQEHIQN IMTLEESVQH ENSBTAP00000033333/1-730 LIPDLNQITE CSDSVELGRL LQLILGCAVN CEKKQEHIQN IMTLEESVQH BACU000215/1-686 LIPDLNQITE CSDSVELGRL LQLILGCAVN CEKKQEHIQN IMTLEESVQH ENSTTRP00000004416/1-728 LIPDLNQITE CSDSVELGRL LQLILGCAVN CEKKQEHIQN IMTLEESVQH 151 200 bmy_09414T0/1-644 VVMTAIQELM SKEIVSSPTN DAVGELEQQL KRALEELQEA LAEKEELRQR ENSP00000360252/1-728 VVMTAIQELM SKEILSSPPN DAVGELEQQL KRALEELQEA LAEKEELRQR ENSBTAP00000033333/1-730 VVMTAIQELM SKEIVSSPTN DAVGELEQQL KRALEELQEA LAEKEELRQR BACU000215/1-686 VVMTAIQELM SKEIVSSPTN DAVGELEQQL KRALEELQEA LAEKEELRQR ENSTTRP00000004416/1-728 VVMTAIQELM SKEIVSSPTN DAVGELEQQL KRALEELQEA LAEKEELRQR 201 250 bmy_09414T0/1-644 CQELDMQVTA LQDEKNSLVS ENEMMNEKLD QLDGSFDDPN TMVAKKYFHA ENSP00000360252/1-728 CEELDMQVTT LQDEKNSLVS ENEMMNEKLD QLDGSFDDPN TVVAKKYFHA ENSBTAP00000033333/1-730 CQELDMQVTA LQDEKNSLVS ENEMMNEKLD QLDGSFDDPN TMVAKKYFHA BACU000215/1-686 CQELDMQVTA LQDEKNSLVS ENEMMNEKLD QLDGSFDDPN TMVAKKYFHA ENSTTRP00000004416/1-728 CQELDMQVTA LQDEKNSLVS ENEMMNEKLD QLDGSFDDPN TMVAKKYFHA 251 300 bmy_09414T0/1-644 QLQLEQLQEE NFRLEAAKDD YRVHCEELEK QLIEFQHRND ELTSLAEEXR ENSP00000360252/1-728 QLQLEQLQEE NFRLEAAKDD YRVHCEELEK QLIEFQHRND ELTSLAEETR ENSBTAP00000033333/1-730 QLQLEQLQEE NFRLEAAKDD YRVHCEELEK QLIEFQHRND ELTSLAEETR BACU000215/1-686 QLQLEQLQEE NFRLEAAKDD YRVHCEELEK QLIEFQHRND ELTSLAEETR ENSTTRP00000004416/1-728 QLQLEQLQEE NFRLEAAKDD YRVHCEELEK QLIEFQHRND ELTSLAEETR 301 350 bmy_09414T0/1-644 ALKDEIDVLR ATSDKANKLE STVEIYRQKL QDLNDLRKQV KTLQETNMMY ENSP00000360252/1-728 ALKDEIDVLR ATSDKANKLE STVEIYRQKL QDLNDLRKQV KTLQETNMMY ENSBTAP00000033333/1-730 ALKDEIDVLR ATSDKANKLE STVEIYRQKL QDLNDLRKQV KTLQETNMMY BACU000215/1-686 ALKDEIDVLR ATSDKANKLE STVEIYRQKL QDLNDLRKQV KTLQETNMMY ENSTTRP00000004416/1-728 ALKDEIDVLR ATSDKANKLE STVEIYRQKL QDLNDLRKQV KTLQETNMMY 351 400 bmy_09414T0/1-644 MHNTVSLEEE LKKANAARTQ LETYKRQVQD LHVKLSSESK RADTLAFEMK ENSP00000360252/1-728 MHNTVSLEEE LKKANAARTQ LETYKRQVQD LHVKLSSESK RADTLAFEMK ENSBTAP00000033333/1-730 MHNTVSLEEE LKKANAARTQ LETYKRQVQD LHVKLSSESK RADTLAFEMK BACU000215/1-686 MHNTVSLEEE LKKANAARTQ LETYKRQVQD LHVKLSSESK RADTLAFEMK ENSTTRP00000004416/1-728 MHNTVSLEEE LKKANAARTQ LETYKRQVQD LHVKLSSETK RADTLAFEMK 401 450 bmy_09414T0/1-644 RLEEKHEALL KEKERLIEQL DTLKETNEEL RCSQVQQDHL NQTDASATKS ENSP00000360252/1-728 RLEEKHEALL KEKERLIEQR DTLKETNEEL RCSQVQQDHL NQTDASATKS ENSBTAP00000033333/1-730 RLEEKHEALL KEKERLIEQR DTLKETNEEL RCSQVQQDHL NQADASATKS BACU000215/1-686 RLEEKHEALL KEKERLIEQL DTLKETNEEL RCSQVQQDHL NQTDASATKS ENSTTRP00000004416/1-728 RLEEKHEALL KEKERLIEQL DTLKETNEEL RCSQVQQDHL NQTDASATKS 451 500 bmy_09414T0/1-644 YENLAAEIMP VEYREVFIRL QHENKMLRLQ QEGTENERIE ELQEQLEQKQ ENSP00000360252/1-728 YENLAAEIMP VEYREVFIRL QHENKMLRLQ QEGSENERIE ELQEQLEQKH ENSBTAP00000033333/1-730 YENLAAEIMP VEYREVFIRL QHENKMLRLQ QEGTENERIE ELQEQLEQKH BACU000215/1-686 YENLAAEIMP VEYREVFIRL QHENKMLRLQ QEGTENERIE ELQEQLEQKQ ENSTTRP00000004416/1-728 YENLAAEIMP VEYREVFIRL QHENKMLRLQ QEGTENERIE ELQEQLEQKH 501 550 bmy_09414T0/1-644 RKMNELETEQ RLSREQIREL QQQIEDLQKS LQEQGSKSEG ESSSKLKQKL ENSP00000360252/1-728 RKMNELETEQ RLSKERIREL QQQIEDLQKS LQEQGSKSEG ESSSKLKQKL ENSBTAP00000033333/1-730 RKMNELETEQ RLSKERIREL QQQIEDLQKS LQEQGSKSEG ESSSKLKQKL BACU000215/1-686 RKMNELETEQ RLSKEQIREL QQQIEDLQKS LQEQGSKSEG ESSSKLKQKL ENSTTRP00000004416/1-728 RKMNELETEQ RLSKEQIREL QQQIEDLQKS LQEQGSKSEG ESSSKLKQKL 551 600 bmy_09414T0/1-644 EAHMEKLTEV HEELQKKQEL IEDLQPDVNQ N--VQKINEL EAALQKKDED ENSP00000360252/1-728 EAHMEKLTEV HEELQKKQEL IEDLQPDINQ N--VQKINEL EAALQKKDED ENSBTAP00000033333/1-730 EAHMEKLTEV HEELQKKQEL IEDLQPDVNQ NAIVQKINEL EAALQKKDED BACU000215/1-686 EAHMEKLTEV HEELQKKQEL IEDLQPDVNQ N--VQKINEL EAALQKKDED ENSTTRP00000004416/1-728 EAHMEKLTEV HEELQKKQEL IEDLQPDVNQ N--VQKINEL EAALQKKDED 601 650 bmy_09414T0/1-644 MKAMEERYKM YLEKARNV-S GLSFRVLVFV TWVLIGPIPP LLGSMSHRF- ENSP00000360252/1-728 MKAMEERYKM YLEKARNVIK TLDPKLNPAS AEIML--LRK QLAEKERRIE ENSBTAP00000033333/1-730 MKAMEERYKM YLEKARNVIK TLDPKLNPAS AEIML--LRK QLAEKERRIE BACU000215/1-686 MKAMEERYKM YLEKARNVIK TLDPKLNPAS AEIML--LRK QLAEKERRIE ENSTTRP00000004416/1-728 MKAMEERYKM YLEKARNVIK TLDPKLNPAS AEIML--LRK QLAEKERRIE 651 700 bmy_09414T0/1-644 -------AXX YPALPVRFLV ---------- -RLHLSPHVL S--------- ENSP00000360252/1-728 ILESECKVAK FRDYEEKLIV SAWYNKSLAF QKLGMESRLV SGGGACSDTG ENSBTAP00000033333/1-730 ILESECKVAK FRDYEEKLIV SAWYNKSLAF QKLGMESRLV SSSGACKDTG BACU000215/1-686 ILESECKVAK FRDYEEKLIV SAWYNKSLAF QKLGMESRLV SGSGAYKDTG ENSTTRP00000004416/1-728 ILESECKVAK FRDYEEKLIV SAWYNKSLAF QKLGMESRLV SGSGAYRDTG 701 750 bmy_09414T0/1-644 -----LSLIS IRKYYTWLHR DS-------- -- ENSP00000360252/1-728 ACTPARSFLA QQRHITNTRR NLSVKVPATT SD ENSBTAP00000033333/1-730 ACAPARSFLA QQRHITSTRR SLSVKVPAAT TD BACU000215/1-686 ACAPARSFLA QQRHITSTRR NLSVKVPATT SD ENSTTRP00000004416/1-728 ACAPARSFLA QQRHITSTRR NLSVKVPATT SD