KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:09 2014 Check: 00 .. Name: ENSTTRP00000007382/1-717 Len: 740 Check: 6989 Weight: 1.00 Name: ENSP00000352358/1-725 Len: 740 Check: 7076 Weight: 1.00 Name: ENSBTAP00000033351/1-723 Len: 740 Check: 5746 Weight: 1.00 Name: bmy_20635T0/1-713 Len: 740 Check: 4242 Weight: 1.00 Name: BACU019362/1-720 Len: 740 Check: 9528 Weight: 1.00 // 1 50 ENSTTRP00000007382/1-717 MGLPLPRE-K GHILCLWRKF RRWFQRQESW AQRRDEQNLL QQKRI--WES ENSP00000352358/1-725 MGLSLPKE-K GLILCLWSKF CRWFQRRESW AQSRDEQNLL QQKRI--WES ENSBTAP00000033351/1-723 MGLPLPKE-K GHILCLWRKL CRWFQRQEPW AQRRDEQNLL QQRRI--WES bmy_20635T0/1-713 MEKELHKGCR GFLSFFSWVF KDPSDFCELW LHLPFRESIL AASRRMDW-- BACU019362/1-720 MGLPLPRE-K GHILCLWRKF RRWFQRQESW ARRRDDEYLL QQKRI--WES 51 100 ENSTTRP00000007382/1-717 PLLTAAKEND IQALVKLLKY EACDVHQK-- GALGETALHV AALYDHLEAA ENSP00000352358/1-725 PLLLAAKDND VQALNKLLKY EDCKVHQR-- GAMGETALHI AALYDNLEAA ENSBTAP00000033351/1-723 PLLLAAKEND IQALSKLLKY EACDVHQKVP GAMGETALHV AALYDNLEAA bmy_20635T0/1-713 ----AAKEND IQALSKLLKY EACDVHQK-- GALGETALHV AALYDNLEAA BACU019362/1-720 PLLTAAKEND VQALSKLLKY EACDVHQK-- GALGETALHV AALYDNLEAA 101 150 ENSTTRP00000007382/1-717 IVLMEAAPEL VDEPITSELY EGQTALHMAI MNQNVNLVKA LLAHGASVSA ENSP00000352358/1-725 MVLMEAAPEL VFEPMTSELY EGQTALHIAV VNQNMNLVRA LLARRASVSA ENSBTAP00000033351/1-723 TVLMEAAPEL VKEPMTSELY EGQTALHIAV MNRNVNLVKA LLAHGASVSA bmy_20635T0/1-713 IALMEAVPEL VNEPITSELY EGQTALHMAV MNQNVNLVKA LLAHGANVSA BACU019362/1-720 IALMEAVPEL VNEPITSELY EGQTALHMAV MNQNVNLVKA LLAHGANVSA 151 200 ENSTTRP00000007382/1-717 RAVGSAFCLS PHNLLYFXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000352358/1-725 RATGTAFRRS PCNLIYFGEH PLSFAACVNS EEIVRLLIEH GADIRAQDSL ENSBTAP00000033351/1-723 RAIGSAFRLT PHNLIYFGEH PLSFAACMGS EEIVRLLIKH GADIRAQDSL bmy_20635T0/1-713 RVTGSNFCPG PHNLISFGEH PLSFAACMGS EEIVRLLIEH GADIRAQDSL BACU019362/1-720 RVTGSNFCPG PHNLISFGEH PLSFAACVGS EEIVRLLIEH GADIRAQDSL 201 250 ENSTTRP00000007382/1-717 XNTVLHILVL QPSKTFACQM YNLLLSYDGH RDHLQSLDLV PNHQGLTPFK ENSP00000352358/1-725 GNTVLHILIL QPNKTFACQM YNLLLSYDRH GDHLQPLDLV PNHQGLTPFK ENSBTAP00000033351/1-723 GNTVLHILVL QPNKTFACQM YNLLLSYDRR GDHLQSLDLM LNHQGLTPFK bmy_20635T0/1-713 GNTVLHILVL QPNKTFACQM YNLLLSYDAR GDHLQSLDLV PNHQGLTPFK BACU019362/1-720 GNTVLHILVL QPNKTFACQM YNLLLSYDGR GDHLQSLDLV PNHQGLTPFK 251 300 ENSTTRP00000007382/1-717 LAGVEGNTTM FQHLMQKRKH IQWTCGPLTS TLYDLTEIDS SGEEQSLLEL ENSP00000352358/1-725 LAGVEGNTVM FQHLMQKRKH TQWTYGPLTS TLYDLTEIDS SGDEQSLLEL ENSBTAP00000033351/1-723 LAGVEGNTVM FQNLVQKQKY IQWTCGPLTS TLYDLTEIDS SGEELSLLEL bmy_20635T0/1-713 LAGVEGNTMM FQNLMQKRKY IQWTYGPLTS TLYDLTEIDS SGEEQSLLEL BACU019362/1-720 LAGVEGNTTM FQNLMQKRKH IQWTYGPLTS TLYDLTEIDD SGEQQSLLEL 301 350 ENSTTRP00000007382/1-717 IVTSKKREXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000352358/1-725 IITTKKREAR QILDQTPVKE LVSLKWKRYG RPYFCMLGAI YLLYIICFTM ENSBTAP00000033351/1-723 IVTSKKREAR QILDQTPVKE LVTLKWKRYG RPYFCVLAAM YLLYIVCFTM bmy_20635T0/1-713 VVTSKKREAR QILDQTPVKE LVNLKWKRYG WPYFCMLAAI YLLYMVCFTT BACU019362/1-720 IVTSKKREVR GTGRGQEGVW SSGEGATGES GSLSCLLSS- ---------- 351 400 ENSTTRP00000007382/1-717 XXXXXXXXXX XXXXXX---X XXXXXXXXXX X-------XE AYVTPEDHLR ENSP00000352358/1-725 CCIYRPLKPR TNNRTS---P RDNTLLQQKL L-------QE AYMTPKDDIR ENSBTAP00000033351/1-723 CCVYRPLKPR TDNETD---P RDNTIWEQKP L-------QE AYVTHQDHLR bmy_20635T0/1-713 CCVYRPLNPR TDKQTG---P RDNTLLQQKL L-------QE AYVTPEDHLR BACU019362/1-720 CSAAGSPDPG PDASEGAGEP QVEEIWVAIL LCAGCHIPAE AYVTPEDHLR 401 450 ENSTTRP00000007382/1-717 LVGELVSVFG AVIILLIEIP DIFRVGVTRF FGQTILGGPF HVLFITYACM ENSP00000352358/1-725 LVGELVTVIG AIIILLVEVP DIFRMGVTRF FGQTILGGPF HVLIITYAFM ENSBTAP00000033351/1-723 LVGELVSIFG AVIILFIEIT DIFRVGLSRV FGQTILGGPF HVLFITYSCM bmy_20635T0/1-713 LVGELVSVFG AVIILLIEIP DIFRVGVTRF FGQTILGGPF HVLFITYACM BACU019362/1-720 LVGELVSVFG AVIILLIEIP DIFRVGVTRF FGQTILGGPF HVLFMTYACM 451 500 ENSTTRP00000007382/1-717 VLVTMVMRLT NTNGEVVPMS FALVLGWCNV MYFARGFQML GPFTVMIQKM ENSP00000352358/1-725 VLVTMVMRLI SASGEVVPMS FALVLGWCNV MYFARGFQML GPFTIMIQKM ENSBTAP00000033351/1-723 VLVTMVMRLT NTSGEVVPMS FALVLGWCSV MYFARGFQML GPFTIMIQKM bmy_20635T0/1-713 VLVTMVMRLT NTNGEVVPMS FALVLGWCNV MYFARGFQML GPFT-----M BACU019362/1-720 VLVTMVMRLT NTNGEVVPMS FALVLGWCNV MYFVQGFQML GPFTVMIQKM 501 550 ENSTTRP00000007382/1-717 IFGDLMRFCW LMAVVILGFA SAFFIIFQTE DPNELGHFYS YPMALFSTFE ENSP00000352358/1-725 IFGDLMRFCW LMAVVILGFA SAFYIIFQTE DPEELGHFYD YPMALFSTFE ENSBTAP00000033351/1-723 IFGDLMRFCW LMAVVILGFA SAFFIIFQTE DPNELGHFYS YPMALFSTFE bmy_20635T0/1-713 IFGDLMRFCW LMAVVILGFA SAFFIIFQTQ DPNELGHFYN YPMALFSTFE BACU019362/1-720 IFGDLMRFCW LMAVVILGFA SAFFIIFQTE DPNELGHFYN YPMALFSTLE 551 600 ENSTTRP00000007382/1-717 LFLTIIDGPA NYTVDLPFMY SVTYAAFAII AALLMLNLLI AMMGDTHWRV ENSP00000352358/1-725 LFLTIIDGPA NYNVDLPFMY SITYAAFAII ATLLMLNLLI AMMGDTHWRV ENSBTAP00000033351/1-723 LFLTIIDGPA NYDVDLPFMY SITYAAFAII AALLMLNLLI AMMGDTHWRV bmy_20635T0/1-713 LFLTIIDGPA NYDVDLPFMY SITYAAFAVI AALLMLNLLI AMMGDTHWRV BACU019362/1-720 LFLTIIDGPA NYSVDLPFMY SVTYAAFAVI AALLMLNLLI AMMGDTHWRV 601 650 ENSTTRP00000007382/1-717 AHERDELWRA QVVATTVMLE KKLPRCLWPR SGICGRKFGL GDRWFLRVED ENSP00000352358/1-725 AHERDELWRA QIVATTVMLE RKLPRCLWPR SGICGREYGL GDRWFLRVED ENSBTAP00000033351/1-723 AHERDELWRA QVVATTVMLE KKLPRCLWPR SGICGHKFGL GDRWFLRVEE bmy_20635T0/1-713 AHERDELWRA QVVATTVMLE KKLPRCLWPR SGICGRKFGL GDRWFLRVED BACU019362/1-720 AHERDELWRA QVVATTVMLE KKLPRCLWPR SGICGRKFGL GDRWFLRVED 651 700 ENSTTRP00000007382/1-717 RQDLNRQRVR RYAQAFCNAG SE----DDME GRGLGGP--- HLSLPAPSVS ENSP00000352358/1-725 RQDLNRQRIQ RYAQAFHTRG SEDLDKDSVE KLELGCPFSP HLSLPMPSVS ENSBTAP00000033351/1-723 KQDINQQRVR RYAQAFCHPG SE----DDTE RLWLGGPFGT HLSLLTPSVS bmy_20635T0/1-713 RQDLNRQRVW RYAQAFCNPG SE----DDME GRWLGGPFGP HLSLPAPSVS BACU019362/1-720 RRDLNRQRVR RYAQAFCNPG SE----DDME GRWLGGPFGP HLSLPDPSVS 701 750 ENSTTRP00000007382/1-717 RSTSRSSTNW ERLREAT-RR ERRGTMTMAL EDGQCWEYQI ENSP00000352358/1-725 RSTSRSSANW ERLRQGTLRR DLRGIINRGL EDGESWEYQI ENSBTAP00000033351/1-723 RSTSRSSINW ERLRQGTLKR ELRGVVNKAL EDGEGWEYQI bmy_20635T0/1-713 RSTSRSSMNW GRLREATRRR ERRGTVNRAL EDREGWEYQI BACU019362/1-720 RSTSRSSMNW GRLWEATRRR ERRGTVNRAL EDGEGWEYQI