KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:10 2014 Check: 00 .. Name: ENSTTRP00000013393/1-454 Len: 458 Check: 9634 Weight: 1.00 Name: ENSP00000409612/1-425 Len: 458 Check: 6217 Weight: 1.00 Name: ENSBTAP00000033383/1-421 Len: 458 Check: 9541 Weight: 1.00 Name: bmy_08474T0/1-309 Len: 458 Check: 2260 Weight: 1.00 Name: BACU009552/1-421 Len: 458 Check: 696 Weight: 1.00 // 1 50 ENSTTRP00000013393/1-454 MAALFRRSC- ---GVLRSLS RFDWRSQHTK AVQHREPGSG FSFAFTEQQK ENSP00000409612/1-425 MAAGFGRCCR CSLQVLRSIS RFHWRSQHTK ANRQREPGLG FSFEFTEQQK ENSBTAP00000033383/1-421 MIALFRRSC- ---GVLRSLS HFDWRSQHTK TALQREPGSG FSFEFTEQQK bmy_08474T0/1-309 ---------- ----VLRSLS RFDWRSQHTK AVQHREPGSG FSFAFTEQQK BACU009552/1-421 MAALFRRSC- ---VVLRSLS RFDWRSQHTK AVQHREPGSG FSFAFTEQQK 51 100 ENSTTRP00000013393/1-454 EFQATARKFA REEIIPVAAE YDKTGEYPVP LIKRAWELGL LNTHIPESCD ENSP00000409612/1-425 EFQATARKFA REEIIPVAAE YDKTGEYPVP LIRRAWELGL MNTHIPENC- ENSBTAP00000033383/1-421 EFQATARKFA REEIIPLAAE YDKTGEYPVP LIKRAWELGL MNTHIPESC- bmy_08474T0/1-309 EFQATARKFA REEIIPVAAE YDKTGEYPVP LIKRAWELGL LNTHIPENC- BACU009552/1-421 EFQATARKFA REEIIPVAAE YDKTGEYPVP LIKRAWELGL LNTHIPESC- 101 150 ENSTTRP00000013393/1-454 FSTCQLLEAC TQHLEAFFLL LTGSDVNLIL ILGGLGLGTF DSCLITEEMA ENSP00000409612/1-425 ---------- ---------- ---------- --GGLGLGTF DACLISEELA ENSBTAP00000033383/1-421 ---------- ---------- ---------- --GGLGLGTF DSCLISEELA bmy_08474T0/1-309 ---------- ---------- ---------- --GGLGLGTF DSCLITEEMA BACU009552/1-421 ---------- ---------- ---------- --GGLGLGTF DSCLITEEMA 151 200 ENSTTRP00000013393/1-454 YGCTGVQTAI EGNSLGXXXX XXXXXXXXXX XXXXXXXXXX XXXAYCVTEP ENSP00000409612/1-425 YGCTGVQTAI EGNSLGQMPI IIAGNDQQKK KYLGRMTEEP LMCAYCVTEP ENSBTAP00000033383/1-421 YGCTGVQTAI EANSLGQMPV IIAGNDQQQK KYLGRMTEEP LMCAYCVTEP bmy_08474T0/1-309 YGCTGVQTAI EGNSLGQMPV IIAGNDQQQK KYLGRLTEEP MMCAYCVTEP BACU009552/1-421 YGCTGVQTAI EGNSLGQMPV IIAGNDQQQK KYLGRLTEEP MMCAYCVTEP 201 250 ENSTTRP00000013393/1-454 GAGSDVAAIK TKAEKKGDEY IINGQKMWIT NGGKANWYFL LARSDLDPKA ENSP00000409612/1-425 GAGSDVAGIK TKAEKKGDEY IINGQKMWIT NGGKANWYFL LARSDPDPKA ENSBTAP00000033383/1-421 VAGSDVAGIK TKAEKKGDEY IINGQKMWIT NGGKANWYFL LARSDPDPKA bmy_08474T0/1-309 GAGSDVAAIK TKAEKKGDEY IINGQKMWIT NGGKANWYFL LARSDLDPKA BACU009552/1-421 GAGSDVAAIK TKAEKKGDEY IINGQKMWIT NGGKANWYFL LARSDLDPKA 251 300 ENSTTRP00000013393/1-454 PASKAFTGFI VEADTPGVQI GRKXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000409612/1-425 PANKAFTGFI VEADTPGIQI GRKELNMGQR CSDTRGIVFE DVKVPKENVL ENSBTAP00000033383/1-421 PASKAFTGFI VEADTPGVQI GRKELNMGQR CSDTRGIVFE DVRVPKENVL bmy_08474T0/1-309 PASKAFTGFI VEADTPGVQV GRKELNMGQR CSDTRGIVFE DVRVPKENVL BACU009552/1-421 PASKAFTGFI VEADTPGVQV GRKELNMGQR CSDTRGIVFE DVRVPKENVL 301 350 ENSTTRP00000013393/1-454 XXXXXXXXXX XXXXXXXXXX VAAGAVGLAQ RALDEATKYA LERKTFGKLL ENSP00000409612/1-425 IGDGAGFKVA MGAFDKTRPV VAAGAVGLAQ RALDEATKYA LERKTFGKLL ENSBTAP00000033383/1-421 IGEGAGFKIA MGAFDKTRPP VAAAAVGLAQ RALDEATKYA LERKTFGKLL bmy_08474T0/1-309 IGEGAGFKIA MGAFDKTRPL VAAGAVGLAQ RALDEATKYA LERKTFGKML BACU009552/1-421 IGEGAGFKIA MGAFDKTRPL VTAGAVGLAQ RALDEATKYA LERKTFGKLL 351 400 ENSTTRP00000013393/1-454 VEHQGVSFLL ADMAMKVELA RLSYQRAAWE VDSGRRNTYF ASIAKAYAGD ENSP00000409612/1-425 VEHQAISFML AEMAMKVELA RMSYQRAAWE VDSGRRNTYY ASIAKAFAGD ENSBTAP00000033383/1-421 IEHQGISFLL AEMAMKVELA RLSYQRAAWE VDSGRRNTYY ASIAKAYAGD bmy_08474T0/1-309 VEYKII---- ---------- ---------- ---------- ---------- BACU009552/1-421 VEHQGISFLL ADMAMKVELA RLSYQRAAWE VDSGRRNTYF ASIAKAWAGD 401 450 ENSTTRP00000013393/1-454 IANQVATDAV QIFGGNGYNT EYPVEKLMRD AKIYQIYEGT AQIQRIIIAR ENSP00000409612/1-425 IANQLATDAV QILGGNGFNT EYPVEKLMRD AKIYQIYEGT SQIQRLIVAR ENSBTAP00000033383/1-421 IANQLASDAV QIFGGNGFNT EYPVEKLMRD AKIYQIYEGT AQIQRLIIAR bmy_08474T0/1-309 ---------- ---------- ---------- ---------- ---------- BACU009552/1-421 IANQVATDAV QIFGGNGYNT EYPVEKLMRD AKIYQIYEGT AQIQRIIIAR 451 500 ENSTTRP00000013393/1-454 EHIGRYKN ENSP00000409612/1-425 EHIDKYKN ENSBTAP00000033383/1-421 EHIGRYKK bmy_08474T0/1-309 -------- BACU009552/1-421 EHIGRYKN