KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:11 2014 Check: 00 .. Name: ENSTTRP00000009025/1-494 Len: 510 Check: 7747 Weight: 1.00 Name: BACU006741/1-508 Len: 510 Check: 5511 Weight: 1.00 Name: ENSP00000321498/1-494 Len: 510 Check: 1487 Weight: 1.00 Name: bmy_04334T0/1-466 Len: 510 Check: 6988 Weight: 1.00 Name: ENSBTAP00000033404/1-495 Len: 510 Check: 2078 Weight: 1.00 // 1 50 ENSTTRP00000009025/1-494 MAWPNIFQRG ALLSQFSHHH VVVFLLTFFS YSLLHASRKT FSNVKVSISK BACU006741/1-508 MAWPSIFQRG TLLSQFSHHH VVVFLLTFFS YSLLHASRKT FSNVKVSISK ENSP00000321498/1-494 MAWPNVFQRG SLLSQFSHHH VVVFLLTFFS YSLLHASRKT FSNVKVSISE bmy_04334T0/1-466 MAWPNIFQRG TLLSQFSHHH VVVFLLTFFS YSLLHASRKT FSNVKVSISK ENSBTAP00000033404/1-495 MAWPRIFQRG ALLSRFSHHH MVVFLLTFFS YSLLHASRKT FSNVKVSISK 51 100 ENSTTRP00000009025/1-494 QWTPSAFNKS IE-LPVEXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGL BACU006741/1-508 QWTPSAFNTS IE-LPVEIWS SNHLFPSAEE ATLFLGTLDT IFLFSYAVGL ENSP00000321498/1-494 QWTPSAFNTS VE-LPVEIWS SNHLFPSAEK ATLFLGTLDT IFLFSYAVGL bmy_04334T0/1-466 QWTPSAFNKS IE-LPVEIWS SNHLFPSAEE ATLFLGTLDT IFLFSYAVGL ENSBTAP00000033404/1-495 QWTPSAFNKS TELLPVEIWS SNHLFPSAEE ATLFLGMLDT IFLFSYAVGL 101 150 ENSTTRP00000009025/1-494 FISGIVGDRL NLRWVLSFGM CSSALVVFVF GTLTEWLHFY NKGLYCSLWI BACU006741/1-508 FISGIIGDRL NLRWVLSFGM CSSALVVFVF GTLTEWLHFY NKGLYCSLWI ENSP00000321498/1-494 FISGIVGDRL NLRWVLSFGM CSSALVVFVF GALTEWLRFY NKWLYCCLWI bmy_04334T0/1-466 FISGIIGDRL NLRWVLSFGM CSSALVVFAF GTLTEWLHFY NKGLYCSLWI ENSBTAP00000033404/1-495 FISGIVGDRL NLRWVLSFGM CSSALVVFVF GTLTEWLHFY NKGLYCSLWI 151 200 ENSTTRP00000009025/1-494 VNGLLQSTGW PCVVAVMGNW FGKAGR---- ---GVVFGLW SACASVGNIL BACU006741/1-508 VNGLLQSTGW PCVVAVMGNW FGKAGKFRAA GRGGFMSKYI GNNVDPGDGL ENSP00000321498/1-494 VNGLLQSTGW PCVVAVMGNW FGKAGR---- ---GVVFGLW SACASVGNIL bmy_04334T0/1-466 VNGLLQSTGW PCVVAVMGNW FGKAGR---- ---GVVFGLW SACASVGNIL ENSBTAP00000033404/1-495 VNGLLQSTGW PCVVAVMGNW FGKAGR---- ---GVVFGLW SACASVGNIL 201 250 ENSTTRP00000009025/1-494 GAC------- -LASSVLQYG YEYAFLVTAA VQFAGGIIIF FGLLVSPEEI BACU006741/1-508 -ACGTHSQQS PVHGQILSVA KAYAFLVTAA VQFAGGIIIF FGLLVSPEEI ENSP00000321498/1-494 GAC------- -LASSVLQYG YEYAFLVTAS VQFAGGIVIF FGLLVSPEEI bmy_04334T0/1-466 GAC------- -LASSVLQYG YEYAFLVTAA VQFAGGIIIF FGLLVSPEEI ENSBTAP00000033404/1-495 GAC------- -LASSVLQYG YEYAFLVTAA VQFAGGIIIF FGLLVSPEEI 251 300 ENSTTRP00000009025/1-494 GLPGIEAEEN FEDDSHRPLI SGAENEDEAE PNYSIQEDKT ITQVKAISFY BACU006741/1-508 GLPGIEAEEN FEEDSHRPLI SGAENEDEAE PNYSIQEDKT ITQVKAISFY ENSP00000321498/1-494 GLSGIEAEEN FEEDSHRPLI NGGENEDEYE PNYSIQDDSS VAQVKAISFY bmy_04334T0/1-466 G-------EK LLFYSERLTV TGKE------ ---------- ----KPVART ENSBTAP00000033404/1-495 GIPGIETEDN FEEDSHRPLI NGAENEDEAE PNYSIQEGNT VTQVKAISFY 301 350 ENSTTRP00000009025/1-494 QACCLPGVIA YSLAYACLKL VNYSFFFWLP FYLSNNFGWK EAEADKLSIW BACU006741/1-508 QACCLPGVIA YSLAYACLKL VNYSFFFWLP FYLSNNFGWK EAEADKLSIW ENSP00000321498/1-494 QACCLPGVIP YSLAYACLKL VNYSFFFWLP FYLSNNFGWK EAEADKLSIW bmy_04334T0/1-466 ARLFLPRR-T YSLAYACLKL VNYSFFFWLP FYLSNNFGWK EAEADKLSIW ENSBTAP00000033404/1-495 QACCLPGVIA YSLAYACLKL VNYSFFFWLP FYLSNNFGWK EAEADQLSIW 351 400 ENSTTRP00000009025/1-494 YDVGGIIGGT LQGFISDVLQ KRAPVLALSL LLAVGSLVGY SRSPNDKSIN BACU006741/1-508 YDVGGIIGGT LQGFISDVLQ KRAPVLALSL LLAIGSLVGY SRSPNDKSIN ENSP00000321498/1-494 YDVGGIIGGT LQGFISDVLQ KRAPVLALSL LLAVGSLIGY SRSPNDKSIN bmy_04334T0/1-466 YDVGGIIGGT LQGFISDVLQ KRAPVLALSL LLAVGSLVGY SRSPNDKSIN ENSBTAP00000033404/1-495 YDVGGIIGGT LQGFISDMLQ KRAPVLALSL LLAIGSLVGY SRSPNDKSIN 401 450 ENSTTRP00000009025/1-494 ALLMAVTGFF IGGPSNMISS AISADLGRQE LIQGSTEALA TVTGIVDGTG BACU006741/1-508 ALLMAVTGFF IGGPSNMISS AISADLGRQE LIQGSSEALA TVTGIVDGTG ENSP00000321498/1-494 ALLMTVTGFF IGGPSNMISS AISADLGRQE LIQRSSEALA TVTGIVDGSG bmy_04334T0/1-466 ALLMAVTGFF IGGPSNMISS AISADLGRQE LIQGSSEALA TVTGIVDGTG ENSBTAP00000033404/1-495 ALLMAVTGFF IGGPSNMISS AISADLGRQE LIQGSSEALA TVTGIVDGTG 451 500 ENSTTRP00000009025/1-494 SIGAAVGQYL VSLIQDNLGW MWVFYFFILM TSCTILFISP LIVREICYLM BACU006741/1-508 SIGAAVGQYL VSLIQDNLGW MWVFYFFILM TSCTIVFISP LIVREMCYLM ENSP00000321498/1-494 SIGAAVGQYL VSLIRDKLGW MWVFYFFILM TSCTIVFISP LIVREIFSLV bmy_04334T0/1-466 SIGAAVGQYL VSLIQDNLGW MWVFYFFILM TSCTILFISP LIVREICCLM ENSBTAP00000033404/1-495 SIGAAVGQYL VSLIQDNLGW MWVFYFFILM TSCTVLFISP LIVRETCSLM 501 550 ENSTTRP00000009025/1-494 QRREARILSG BACU006741/1-508 QRRQTRMLSG ENSP00000321498/1-494 LRRQAHILRE bmy_04334T0/1-466 QRRQARILIG ENSBTAP00000033404/1-495 QRRQTRVLNE