KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:18 2014 Check: 00 .. Name: ENSTTRP00000001091/1-467 Len: 480 Check: 8788 Weight: 1.00 Name: BACU018448/1-480 Len: 480 Check: 1136 Weight: 1.00 Name: ENSP00000370503/1-465 Len: 480 Check: 5614 Weight: 1.00 Name: bmy_22268T0/1-385 Len: 480 Check: 8185 Weight: 1.00 Name: ENSBTAP00000033542/1-476 Len: 480 Check: 3747 Weight: 1.00 // 1 50 ENSTTRP00000001091/1-467 MHSNYRQRGR NQNSSREIPP HTDFPAGCSM ENEPGIVSPF KRVFLKGEKS BACU018448/1-480 MHTNYRQRGR NQNSSREIPP HTDFPAGCSM ENEPGIVSPF KRVFLKGEKS ENSP00000370503/1-465 MHSSCRQR-R NQNLSKEI-P QTEFHTGYSM ENEPGIVSPF KRVFLKGEKS bmy_22268T0/1-385 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033542/1-476 MHSNCRQRGR NQNSSREIPP QTDFPTGYPM ENEPGIVSPF KRVFLKGEKS 51 100 ENSTTRP00000001091/1-467 RDKKAHEKVT ERRPLHTVVL SLPERVEPDR LLSDYIEKEV KYLGQLTSIP BACU018448/1-480 RDKKAHEKVT ERRPLHTVVL SLPERVEPDR LLSDYIEKEV KYLGQLTSIP ENSP00000370503/1-465 RDKKAHEKVT ERRPLHTVVL SLPERVEPDR LLSDYIEKEV KYLGQLTSIP bmy_22268T0/1-385 ---------- ---------- ---------- ---------- -YLGQLTSIP ENSBTAP00000033542/1-476 RDKKAHEKVT ERRPLHTVVL SLPERVEPDR LLSDYIEKEV KYLGQLTSIP 101 150 ENSTTRP00000001091/1-467 GYLNPSSRTE ILHYIDNAKR AHQLPGHLTQ EHDAVISLSA YNVKLAWRDG BACU018448/1-480 GYLNPSSRTE ILHYIDNAKR AHQLPGHLTQ EHDAVISLSA YNVKLAWRDG ENSP00000370503/1-465 GYLNPSSRTE ILHFIDNAKR AHQLPGHLTQ EHDAVLSLSA YNVKLAWRDG bmy_22268T0/1-385 GYLNPSSRTE ILHYIDNAKR AHQLPGHLTQ EHDAVISLSA YNVKLAWRDG ENSBTAP00000033542/1-476 GYLNPSSRTE ILHFIDNAKR AHQLPGHLTQ EHDAVISLSA YNVKLAWRDG 151 200 ENSTTRP00000001091/1-467 EDTILRVPIH DIAAVSYVRD DASHLVVLKT AQDPXXXXXX XXXXXSSRGL BACU018448/1-480 EDTILRVPIH DIAAVSYVRD DASHLVVLKT AQDPGISPSQ SLCAESSRGL ENSP00000370503/1-465 EDIILRVPIH DIAAVSYVRD DAAHLVVLKT AQDPGISPSQ SLCAESSRGL bmy_22268T0/1-385 EDTILRVPIH DIAAVSYVRD DASHLVVLKT AQDPGISPSQ SLCAESSRGL ENSBTAP00000033542/1-476 EDTILRVPIH DIAAVSYVRD DASHLVVLKT AQDPGISPSQ SLCAESSRGL 201 250 ENSTTRP00000001091/1-467 TAGSLSESGV GPVEACCLVI LAVESKVAAE ELCSLLGQVF QIVYTESTID BACU018448/1-480 TAGSLSESGV GPVEACCLVI LAAESKVAAE ELCSLLGQVF QIVYTESTID ENSP00000370503/1-465 SAGSLSESAV GPVEACCLVI LAAESKVAAE ELCCLLGQVF QVVYTESTID bmy_22268T0/1-385 TAGSLSESGV GPVEACCLVI LATESKVAAE ELCSLLGQVF QIVYTESTID ENSBTAP00000033542/1-476 TTGSLSESGV GPVEACCLVI LAAESKVAAE ELCSLLGQVF QIVYTESTID 251 300 ENSTTRP00000001091/1-467 FLDRAIFDGA STPTHHLSLH SDDSSTKVDM KESYETEAST FSFPECAHAG BACU018448/1-480 FLDRAIFDGA STPTHHLSLH SDDSSTKVDM KESYEAEAST FSFPECAHAG ENSP00000370503/1-465 FLDRAIFDGA STPTHHLSLH SDDSSTKVDI KETYEVEAST FCFPESVDVG bmy_22268T0/1-385 FLDRAIFDGA STPTHHLSLH SDDSSTKVDM KESYEAEAST FSFPECAHAG ENSBTAP00000033542/1-476 FLDRAIFDGA STPTHHLSLH SDDSSTKVDM KEPYETEAST FSFPECAHAG 301 350 ENSTTRP00000001091/1-467 GVS------- --PHAKTVSE SELSATAAEL LQDYMLTXXX XXXXXXXXXX BACU018448/1-480 GVSPLSFCMQ TAPHAKTVSE SELSATAAEL LQDYMLTVRR PPPSGDPGPR ENSP00000370503/1-465 GAS------- --PHSKTISE SELSASATEL LQDYMLTLRT KLSSQEIQQF bmy_22268T0/1-385 GVSPLSFCMQ TAPHAKTVSE SELSATAAEL LQDYMLTLRT KLSSQEIQQF ENSBTAP00000033542/1-476 GVSPLSFCMQ TAPHAKTVSE SELSATAAEL LQDYMLTLRT KLSSQEIQQF 351 400 ENSTTRP00000001091/1-467 XXXXXXX--- -XXXXXXXXX XXXXXXXXXX XXXXXXXXLR PFIPEKDSQH BACU018448/1-480 GPTCSSRPVL GPAGLGVRIS LQGWGRVGGR MKACFSVGLR PFIPEKDSQH ENSP00000370503/1-465 AALLHEY--- -RNGASIHEF CINLRQLYGD SRKFLLLGLR PFIPEKDSQH bmy_22268T0/1-385 AALLHEY--- -RDGASVHEF CINLRQLYGD SRKFLLLGLR PFIPEKDSQH ENSBTAP00000033542/1-476 AALLHEY--- -RDGASVHEF CINLRQLYGD SRKFLLLGLR PFIPEKDSQH 401 450 ENSTTRP00000001091/1-467 FENFLETIGV KDGRGIITDS FGRYRRAMSS TSTSTSNGNR AAGSSDDQSA BACU018448/1-480 FENFLETIGV KDGRGIITDS FGRYRRAMSS TSTSTSNGNR AAGSSDDQSA ENSP00000370503/1-465 FENFLETIGV KDGRGIITDS FGRHRRALST TSSSTTNGNR ATGSSDDRSA bmy_22268T0/1-385 FENFLETIGV KDGRGIITDS FGRYRRAMSS TSTSTSNGNR AAGSSDDQSA ENSBTAP00000033542/1-476 FENFLETIGV KDGRGIITDS FGRYRRATSS TSTSTSNGNR AAGSSDDQSV 451 500 ENSTTRP00000001091/1-467 PSEGDEWDRM ISDISNDIEA LGCSMDQDSA BACU018448/1-480 PSEGDEWDRM ISDISNDIEA LGCSMDQDSA ENSP00000370503/1-465 PSEGDEWDRM ISDISSDIEA LGCSMDQDSA bmy_22268T0/1-385 PSEGDEWDRM ISDISNDIEA LGCSMDQDSA ENSBTAP00000033542/1-476 PSEGDEWDRM ISDISNDIEA LGCSMDQDSA