KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:19 2014 Check: 00 .. Name: ENSP00000358886/1-722 Len: 1109 Check: 1174 Weight: 1.00 Name: ENSBTAP00000033568/1-722 Len: 1109 Check: 4137 Weight: 1.00 Name: bmy_11907T0/1-1109 Len: 1109 Check: 8761 Weight: 1.00 Name: BACU002740/1-665 Len: 1109 Check: 8025 Weight: 1.00 Name: ENSTTRP00000001371/1-722 Len: 1109 Check: 5426 Weight: 1.00 // 1 50 ENSP00000358886/1-722 MAVRERAAAA MAALERRVPS LDDFAGQSWS SWVERADLPA ADGAELEESS ENSBTAP00000033568/1-722 ---------- MAALERRVPS LDDFAGQSWS SWVERADLPA ADGAELEESN bmy_11907T0/1-1109 MAVRERAAAA MAALERRVPS LDDFAGQSWS SWVERAELPA ADGAELEESN BACU002740/1-665 ---------- MAALERRVTG LDDFAGQSWS SWVERAELPA ADGAELEESN ENSTTRP00000001371/1-722 MAVRERAAAA MAALERRVPS LDDFAGQSWS SWVERAELPA ADGAELEESN 51 100 ENSP00000358886/1-722 KNTKKLDAMT LIKEDMSIFG HCPAHDDFYL VVCNHCSQVV KPQAFQKHCE ENSBTAP00000033568/1-722 KNPKKLDAMT LIKE------ ---------- ---------- ---------E bmy_11907T0/1-1109 KNLKKLDAMT LIKEDMSIFG HCPAHDDFYL VVCNHCSQVV KPQAFQKHCE BACU002740/1-665 KNLKKLDAMT LIKEDMSIFG HCPAHDDFYL VVCNHCSQVV KPQAFQKHCE ENSTTRP00000001371/1-722 KNLKKLDAMT LIKEDMSIFG HCPAHDDFYL VVCNHCSQVV KPQAFQKHCE 101 150 ENSP00000358886/1-722 RRHGPLSKLY GRAPPPPPAP ASSQKCHVVN GQGPACRAPG STKTSSREKG ENSBTAP00000033568/1-722 RRHGPLSKLY TRAPPPPPAP ASSQKCHVVN GQGPACRGPG STKTSSREKG bmy_11907T0/1-1109 RRHGPLSKLY ARAPPPPPAP ASSQKCHVVN GQGPACRAPG STKTSSREKG BACU002740/1-665 RRHGPLSKLY ARAPPPPPAP ASSQKCHVVN GQGPACRAPG STKTSSREKG ENSTTRP00000001371/1-722 RRHGPLSKLY ARAPPPPPAP ASSQKCHVVN GQGPACRAPG SSKTSSREKG 151 200 ENSP00000358886/1-722 QGSRSRGHQP PEKTQKDNLC ---------- ---------- ---------- ENSBTAP00000033568/1-722 QGSRSRGHQP PEKTQKDNLC LFVPVVNLEK MSSLPKPDGH GIRVAPPSAF bmy_11907T0/1-1109 QGSRSRGHQP PEKTQKDNLC LFVPVVNLEK MSSLPKPDGH GIRVAPPSAF BACU002740/1-665 QGSRSRGHQP PEKTQKDNLC LFVPVVNLEK MSSLPKPDGH GIRVAPPSAF ENSTTRP00000001371/1-722 QGSRSRGHQP PEKTQKDNLC ---------- ---------- ---------- 201 250 ENSP00000358886/1-722 --QPGGLTKD SPGKPPMAPP SKEPPGRENI EIIPSEGSSH WAEGSPPEKE ENSBTAP00000033568/1-722 LSQPGGLTKD SPGKNPMASP SKELPGRESI EIAPSEGPSH RTEGSPSEKE bmy_11907T0/1-1109 LSQPAGLSKD SPGKNPMASP SKELPGRGSI EITPSEGPSH RVESSPSEKE BACU002740/1-665 LSQPAGLSKD SPGRNPMASP SKELPGRGSI EITPSEGPSH RAEGSPSEKE ENSTTRP00000001371/1-722 --QPAGLTKD SPGKNPMASP SKELPGRGSI EITPSEGSSH RAEGSPSEKE 251 300 ENSP00000358886/1-722 PSGTRLPPKT HRKMARKECD LNRQCGVINP ETKKICTRLL TCKIHSVHQR ENSBTAP00000033568/1-722 PGGAKLPPKT HRKMARKECD LNRQCGVINP ETKKICTRLL TCKIHSVHQR bmy_11907T0/1-1109 PVGARLPPKT HRKMARKECD LNRQCGVINP ETKKICTRLL TCKIHSVHQR BACU002740/1-665 PGGARLPPKT HRKMARKECD LNRQCGVINP ETKKICTRLL TCKIHSVHQR ENSTTRP00000001371/1-722 PGGARLPPKT HRKMARKECD LNRQCGVINP ETKKICTRLL TCKIHSVHQR 301 350 ENSP00000358886/1-722 REVQGRAKDF DVLVAELKAN SRKGESPKEK SPGRKEQVLE RPSQELPSSV ENSBTAP00000033568/1-722 REVQGRAKDF DVLVAELKAN SRKGESPKEK SPGRKEAALE RPSQEPPASV bmy_11907T0/1-1109 REVQGRAKDF DVLVAELKAN SRKGESPKEK SPGRKEAALE RPSQEPPSSV BACU002740/1-665 REVQGRAKDF DVLVAELKAN SRKGESPKEK SPGRKEAALE RPSQEPPSSV ENSTTRP00000001371/1-722 REVQGRAKDF DVLVAELKAN SRKGESPKEK SPGRKEAALE RPSQEPPSSV 351 400 ENSP00000358886/1-722 QVVAAVAAPS STFSVRAKQT YPYCALPRSR ASSESELDDE GPCGGDGDPG ENSBTAP00000033568/1-722 QLVAAAAAPS GAFSARAKPT YPYCALPRSR ASSESELDDE GPC-GDGDPG bmy_11907T0/1-1109 QVVAAVAAPS STFSARAKQT YPYCALPRSR ASSESELDDE GPCGGDGDPG BACU002740/1-665 QVVAAVAAPS STFSARAKQT YPYCALPRSR ASSESELDDE GPCGGDGDPG ENSTTRP00000001371/1-722 QVVAAVAAPS STFSARAKQT YPYCALPRSR ASSESELDDE GPCGGDGDPG 401 450 ENSP00000358886/1-722 LFPFPMPRGG TQASSEESEE EGTSDDLHPP PDCHYATRPP RPQAFCTFGS ENSBTAP00000033568/1-722 LFPFPLPRGG AQASSEESEE EGTSDELHLP TDCHYANRPP RPQAFCTFGS bmy_11907T0/1-1109 LFPFPLPRGG AQASSEESEE EGTSDDLHLP TDCHYATRPP RPQAFCTFGS BACU002740/1-665 LFPFPLPRGG AQASSEESEE EGTSDDLHLP TDCHYATRPP RPQAFCTFGS ENSTTRP00000001371/1-722 LFPFPLPRGG AQASSEESEE EGTSDDLHLP TDCHYATRPP RPQAFCTFGS 451 500 ENSP00000358886/1-722 RLVSPGCYVF SRRLDRFCSA LSSMLERHLS THMWKKIPPA AEPPAHLVNS ENSBTAP00000033568/1-722 RLVSPGCYVF SRRLDRFCSA LSSMLERHLS SHMWKKIPPA AEPPSHLVSS bmy_11907T0/1-1109 RLVSPGCYVF SRRLDRFCSA LSSMLERHLS SHMWKKIPPA AEPPSHLVSS BACU002740/1-665 RLVSPGCYVF SRRLDRFCSA LSSMLERHLS SHMWNKLP-- ---------- ENSTTRP00000001371/1-722 RLVSPGCYVF SRRLDRFCSA LSSMLERHLS SHMWKKIPPA AEPPSHLVSS 501 550 ENSP00000358886/1-722 PLSAPLSPSS TGTCPRLPGP TLRPACPASM PPTKDNLVPS YPAGSPSVAA ENSBTAP00000033568/1-722 LPSAPLSPSP TGSSPRLPGP PPRPTCPAST PPTKDSLVPS YPAGSPNVAA bmy_11907T0/1-1109 PPSAPLSPSS TGSCPRLPGP PPRPACPAST PPTKDSLGPG YPAGSPNVAA BACU002740/1-665 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001371/1-722 PPSAPLSPSS TGSCPRLPGP PPRPACPAST PPTKDSLGPG YPAGSPNVAA 551 600 ENSP00000358886/1-722 ACSQAECMGG SQAITSPLPA NTPSPSFSKL PPSKASKSSK GKDGVEVEAP ENSBTAP00000033568/1-722 ACSQAECIGG SQAITSPLPA NTPSPSFSKL PPSKASKSSK GKDRLEVEAP bmy_11907T0/1-1109 ACSQAECMGG SQAITSPLPA NTPSPSFSKL PPSKASKSSK GKDGLEVEAP BACU002740/1-665 ---------- ---------- ---------- -PSKASKSSK GKDGLEVEAP ENSTTRP00000001371/1-722 ACSQAECMGG SQAITSPLPA NTPSPSFSKL PPSKASKSSK GKDGLEVEAP 601 650 ENSP00000358886/1-722 SRKRKLSPGP TTLKRTCILE PTGKGKPSGC RGLSAKTKTA LSMGLNGTMG ENSBTAP00000033568/1-722 SRKRKLSPGP TTFKRTCILE PTGKGKPSGC RGLTAKTKPA LGLGLNGTVG bmy_11907T0/1-1109 SRKRKLSPGP TTFKRTCVLE ATGKGKPSGC RGLSAKTKTA LGMGLNGTVE BACU002740/1-665 SRKRKLSPGP TTFKRTCVLE PTGKGKPSGC RGLSAKTKTA LGMGLNGTVE ENSTTRP00000001371/1-722 SRKRKLSPGP TTFKRTCVLE PTGKGKPSGC RGLSAKTKTG LGMGLNGTVE 651 700 ENSP00000358886/1-722 PRVKRAGPLD CRGSPHQLPT PVKASQLENR GAAGHPAKAL PTNCLSEEEV ENSBTAP00000033568/1-722 PRVKRAGPLD CRGSPHQPPT PVKASQLDSQ GVAGHAAKAL PTNCLSEEEV bmy_11907T0/1-1109 PRVKRAGPLD CRGSPHQLPT PVKASQLDNQ GAAGHPAKAL PTNCLSEEEV BACU002740/1-665 PRVKRAGPLD CRGSPHQPPT PVKASQLDNQ GAAGHPAKAL PTNCLSEEEV ENSTTRP00000001371/1-722 PRVKRAGPLD CRGSPHQPPT PVKASQLDNQ GAAGHPAKAL PTNCLSEEEV 701 750 ENSP00000358886/1-722 AKKRKNLATY CRPVKAKHCQ AGAPADVACS VRRKKPGPAL AFEEKCSTLK ENSBTAP00000033568/1-722 AKKRKNLATY CRPVKAKHCQ AGAPADAACS VRRKKPGPAL AFEEKCSTLQ bmy_11907T0/1-1109 AKKRKNLATY CRPVKAKHCQ AGAPADAACS VRRKKPGPAL AFEEKCSTLK BACU002740/1-665 AKKRKNLATY CRPVKAKHCQ AGAPADAACS VRRKKPGPAL AFEEKCSTLK ENSTTRP00000001371/1-722 AKKRKNLATY CRPVKAKHCQ AGAPADAACS VRRKKPGPAL AFEEKCSTLK 751 800 ENSP00000358886/1-722 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033568/1-722 ---------- ---------- ---------- ---------- ---------- bmy_11907T0/1-1109 VPAQLPEEQG RGRVRMDEYT KSVIRVKSVV VVSTGYLRHK PRQAGHKDTH BACU002740/1-665 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001371/1-722 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000358886/1-722 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033568/1-722 ---------- ---------- ---------- ---------- ---------- bmy_11907T0/1-1109 ELGGRHTVGP ELSSRLPPSP SGLSRTDALS PSPQRALWTN RRIAGGVPGR BACU002740/1-665 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001371/1-722 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000358886/1-722 ---------- ---------- ---------- --SKAH---- ---------- ENSBTAP00000033568/1-722 ---------- ---------- ---------- --ELELPLFP EGKEV----- bmy_11907T0/1-1109 SLSRSRGRLR DRKPGRRALA AGSVGRLGTA MQSLEVGLVP APQREPRLTR BACU002740/1-665 ---------- ---------- ---------- --DLELPLFP EGEEA----- ENSTTRP00000001371/1-722 ---------- ---------- ---------- --SKAH---- ---------- 901 950 ENSP00000358886/1-722 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033568/1-722 ---------- ---------- ---------- ---------- ---------- bmy_11907T0/1-1109 WLRRGSGILA HLVALGFTIF LTVLSRPGTS LFSWHPVFMA LAFCLCTAEA BACU002740/1-665 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001371/1-722 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000358886/1-722 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033568/1-722 ---------- ---------- ---------- ---------- ---------- bmy_11907T0/1-1109 ILLFSPEHSV FFCCSRKARI RLHWAGQTLA ILCAALGLGF IISSRTRSEL BACU002740/1-665 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001371/1-722 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000358886/1-722 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033568/1-722 ---------- ---------- ---------- ---------- ---------- bmy_11907T0/1-1109 PHLVSWHSWV GALTLLATSV QALCGLCLLC PRAARVSRVA RLKLYHLTCG BACU002740/1-665 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001371/1-722 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000358886/1-722 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033568/1-722 ---------- ---GLHEL-- ---------- ---------- ---------- bmy_11907T0/1-1109 LVIYLMATVT VLLGMHSVWF QAQIKGAAWY LCLALPLHPA LVIMHQISSF BACU002740/1-665 ---------- ---GLHEL-- ---------- ---------- ---------- ENSTTRP00000001371/1-722 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000358886/1-722 --------- ENSBTAP00000033568/1-722 --------- bmy_11907T0/1-1109 YLPRKKMEM BACU002740/1-665 --------- ENSTTRP00000001371/1-722 ---------