KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:22 2014 Check: 00 .. Name: bmy_09804T0/1-224 Len: 251 Check: 7585 Weight: 1.00 Name: ENSP00000222728/1-233 Len: 251 Check: 1584 Weight: 1.00 Name: ENSBTAP00000033589/1-249 Len: 251 Check: 7400 Weight: 1.00 Name: ENSTTRP00000006410/1-233 Len: 251 Check: 858 Weight: 1.00 Name: BACU019219/1-233 Len: 251 Check: 868 Weight: 1.00 // 1 50 bmy_09804T0/1-224 MSSYFVNSTF PVTLASGQES FLGQLPLYSS GYADPLRHYP APYGPGPGQD ENSP00000222728/1-233 MSSYFVNPTF PGSLPSGQDS FLGQLPLYQA GY-DALRPFP ASYGASSLPD ENSBTAP00000033589/1-249 MSSYFVNPTF PGSLPSGQDS FLGQLPLYPA GY-DALRPFP ASYGASSLPD ENSTTRP00000006410/1-233 MSSYFVNPTF PGSLPSGQDS FLGQLPLYPA GY-DALRPFP ASYGASSLPD BACU019219/1-233 MSSYFVNPTF PGSLPSGQDS FLGQLPLYPA GY-DALRPFP ASYGASSLPD 51 100 bmy_09804T0/1-224 KGFAASSYYP PAGSGYG-RA APCDYGPAPA FYREKE-SAC ALSGTDEPP- ENSP00000222728/1-233 KTYTSPCFYQ QSNSVLACNR ASYEYG-ASC FYSDKDLSGA SPSGSGKQRG ENSBTAP00000033589/1-249 KTYTSPCFYQ QSNSVLACNR ASYEYG-ASC FYSDKDLSGA SPSGSGKQRG ENSTTRP00000006410/1-233 KTYTSPCFYQ QSNSVLACNR ASYEYG-ASC FYSDKDLSGA SPSGSGKQRG BACU019219/1-233 KTYTSPCFYQ QSNSVLACNR ASYEYG-ASC FYSDKDLSGA SPSGSGKQRG 101 150 bmy_09804T0/1-224 -----PFHPE PR---KSDCA QDKSVFGEAE EQKCSTPVYP WMQRMNSCNS ENSP00000222728/1-233 PGDYLHFSPE QQYKPDSSSG QGKALHDEGA DRKYTSPVYP WMQRMNSCAG ENSBTAP00000033589/1-249 PGDYLHFSPE QQYKPDSSSV PGKALHDEGT DRKYTSPVYP WMQRMNSCAG ENSTTRP00000006410/1-233 PGDYLHFSPE QQYKPDSNSV PGKALHDEGT DRKYTSPVYP WMQRMNSCAG BACU019219/1-233 PGDYLHFSPE QQYKPDSSSV PGKALHDEGT DRKYTSPVYP WMQRMNSCAG 151 200 bmy_09804T0/1-224 SSFGPSGRRG RQTYTRYQTL ELEKEFHYNR YLTRRRRIEI AHALCLTERQ ENSP00000222728/1-233 AVYGSHGRRG RQTYTRYQTL ELEKEFHFNR YLTRRRRIEI ANALCLTERQ ENSBTAP00000033589/1-249 AVYGSHGRRG RQTYTRYQTL ELEKEFHFNR YLTRRRRIEI ANALCLTERQ ENSTTRP00000006410/1-233 AVYGSHGRRG RQTYTRYQTL ELEKEFHFNR YLTRRRRIEI ANALCLTERQ BACU019219/1-233 AVYGSHGRRG RQTYTRYQTL ELEKEFHFNR YLTRRRRIEI ANALCLTERQ 201 250 bmy_09804T0/1-224 IKIWFQNRRM KWKKESKLLS GSQLSAEEEE EKP---AE-- ---------- ENSP00000222728/1-233 IKIWFQNRRM KWKKENKLIN STQPSGEDSE AKA---GE-- ---------- ENSBTAP00000033589/1-249 IKIWFQNRRM KWKKENKLIN STQPSGEDAE AKTLKEGEKE KQKHIEPQRL ENSTTRP00000006410/1-233 IKIWFQNRRM KWKKENKLIN STQPSGEDAE AKA---GE-- ---------- BACU019219/1-233 IKIWFQNRRM KWKKENKLIN STQPSGEDAE AKA---GE-- ---------- 251 300 bmy_09804T0/1-224 - ENSP00000222728/1-233 - ENSBTAP00000033589/1-249 R ENSTTRP00000006410/1-233 - BACU019219/1-233 -