KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:23 2014 Check: 00 .. Name: bmy_06481T0/1-526 Len: 582 Check: 9477 Weight: 1.00 Name: BACU005821/1-577 Len: 582 Check: 1641 Weight: 1.00 Name: ENSP00000242209/1-570 Len: 582 Check: 9413 Weight: 1.00 Name: ENSTTRP00000008489/1-574 Len: 582 Check: 231 Weight: 1.00 Name: ENSBTAP00000033613/1-574 Len: 582 Check: 1396 Weight: 1.00 // 1 50 bmy_06481T0/1-526 ---------- --MEESYADA Y---LTRFAG NIQ------- ---------V BACU005821/1-577 -----MLRRE PELSLGSLEV FPPEAFRDAA PVAGLGLGSD TELQIERRFV ENSP00000242209/1-570 MAF--RGWRP PPPPLLLLLL W---VTGQAA PVA--GLGSD AELQIERRFV ENSTTRP00000008489/1-574 MAIRARGWRP PPPPLLLLLL W---VTGQAA PVAGLGLGSD TELQIERRFV ENSBTAP00000033613/1-574 MAIRARSWRP PPPPLLLLLL W---VTGQAA PVAGLGLGSD SELQIERRFV 51 100 bmy_06481T0/1-526 TSVCP----- --WVHFY--- ---------- SYDRDSTFNV FVGKGQLIAG BACU005821/1-577 PDECPRTVRS GDFVRYHYVG TFPDGQKFDS SYDRDSTFNV FVGKGQLIAG ENSP00000242209/1-570 PDECPRTVRS GDFVRYHYVG TFPDGQKFDS SYDRDSTFNV FVGKGQLITG ENSTTRP00000008489/1-574 PDECPRTVRS GDFVRYHYVG MFPDGQKFDS SYDRDSTFNV FVGKGQLIAG ENSBTAP00000033613/1-574 PEECPRTVRS GDFVRYHYVG TFPDGQKFDS SYDRDSTFNV FVGKGQLIAG 101 150 bmy_06481T0/1-526 MDQALVGMCV NERRFVKIPP KLAYGSEGVS GVIPPDSVLH FDVLLMDIWN BACU005821/1-577 MDQALVGMCV NERRFVKIPP KLAYGSEGVS GVIPPDSVLH FDILLMDIWN ENSP00000242209/1-570 MDQALVGMCV NERRFVKIPP KLAYGNEGVS GVIPPNSVLH FDVLLMDIWN ENSTTRP00000008489/1-574 MDQALVGMCV NERRFVKIPS KLAYGSEGVS GVIPPDSVLH FDVLLMDIWN ENSBTAP00000033613/1-574 MDQALVGMCV NERRFVKIPP KLAYGSDGVS GVIPPDSVLH FDVLLMDIWN 151 200 bmy_06481T0/1-526 SEDQVQIHTY VKPPSCPRTI QVSDFVRYHY NGTFLDGTLF DSSHNRMKTY BACU005821/1-577 SEDQVQIHTY VKPPSCPRTI QVSDFVRYHY NGTFLDGTLF DSSHNRMKTY ENSP00000242209/1-570 SEDQVQIHTY FKPPSCPRTI QVSDFVRYHY NGTFLDGTLF DSSHNRMKTY ENSTTRP00000008489/1-574 SEDQVQIHTY FKPPSCPRTI QVSDFVRYHY NGTFLDGTLF DSSHNRMKTY ENSBTAP00000033613/1-574 SEDQVQIHTY FKPPSCPRTI QVSDFVRYHY NGTFLDGTLF DSSHNRMKTY 201 250 bmy_06481T0/1-526 DTYVGIGWLI PGMDKGLLGM CVGEKRIITI PPFLAYGEDG DG-----KDI BACU005821/1-577 DTYVGIGWLI PGMDKGLLGM CVGEKRIITI PPFLAYGEDG DAIQGXXXXX ENSP00000242209/1-570 DTYVGIGWLI PGMDKGLLGM CVGEKRIITI PPFLAYGEDG DG-----KDI ENSTTRP00000008489/1-574 DTYVGIGWLI PGMDKGLLGM CVGEKRIITI PPFLAYGEDG DG-----KDI ENSBTAP00000033613/1-574 DTYVGIGWLI PGMDKGLLGM CVGEKRIITI PPFLAYGEDG DG-----KDI 251 300 bmy_06481T0/1-526 PGQASLVFDV ALLDLHNPKD GISIENKVVP ENCERQSQRG DFLRYHYNGT BACU005821/1-577 PGQASLVFDV ALLDLHNPKD GISIENKVVP ENCERQSQRG DFLRYHYNGT ENSP00000242209/1-570 PGQASLVFDV ALLDLHNPKD SISIENKVVP ENCERISQSG DFLRYHYNGT ENSTTRP00000008489/1-574 PGQASLVFDV ALLDLHNPKD GISIENKVVP ENCERQSQTG DFLRYHYNGT ENSBTAP00000033613/1-574 PGQASLVFDV ALLDLHNPKD GISIENKVVP ENCERRSQSG DFLRYHYNGT 301 350 bmy_06481T0/1-526 LLDGTFFDSS YSRNRTFDTY IGQGYVIAGM DEGLLGVCIG EKRRIVVPPH BACU005821/1-577 LLDGTFFDSS YSRNRTFDTY IGQGYVIAGM DEGLLGVCIG EKRRIVVPPH ENSP00000242209/1-570 LLDGTLFDSS YSRNRTFDTY IGQGYVIPGM DEGLLGVCIG EKRRIVVPPH ENSTTRP00000008489/1-574 LLDGTFFDSS YSRNRTFDTY IGQGYVIAGM DEGLLGVCIG EKRRIVVPPH ENSBTAP00000033613/1-574 LLDGTFFDSS YSRNRTFDTY IGQGYVIPGI DEGLLGVCIG EKRRIVVPPH 351 400 bmy_06481T0/1-526 LGYGEEGRGN IPGSAVLVFD IHVIDFHNPS DSISITSHYK PPDCSVLSKK BACU005821/1-577 LGYGEEGRGN IPGSAVLVFD IHVIDFHNPS DSISITSHYK PPDCSVLSKK ENSP00000242209/1-570 LGYGEEGRGN IPGSAVLVFD IHVIDFHNPS DSISITSHYK PPDCSVLSKK ENSTTRP00000008489/1-574 LGYGEEGRGN IPGSAVLVFD IHVIDFHNPS DSISITSHYK PPDCSVLSKK ENSBTAP00000033613/1-574 LGYGEEGRGN IPGSAVLVFD IHVIDFHNPS DSISITSHYK PPDCSVLSKK 401 450 bmy_06481T0/1-526 GDYLKYHYNA SLLDGTLLDS TWNLGKTYNI VLGSGQVVLG MDMGLREMCV BACU005821/1-577 GDYLKYHYNA SLLDGTLLDS TWNLGKTYNI VLGSGQVVLG MDMGLREMCV ENSP00000242209/1-570 GDYLKYHYNA SLLDGTLLDS TWNLGKTYNI VLGSGQVVLG MDMGLREMCV ENSTTRP00000008489/1-574 GDYLKYHYNA SLLDGTLLDS TWNLGKTYNI VLGSGQVVLG MDMGLREMCV ENSBTAP00000033613/1-574 GDYLKYHYNA SLLDGTLLDS TWNLGKTYNI VLGFGQVVLG MDMGLREMCV 451 500 bmy_06481T0/1-526 GEKRTVIIPP HLGYGEAGVD GEVPGSAVLV FDIELLELVA GLPEGYMFIW BACU005821/1-577 GEKRTVIIPP HLGYGEAGVD GEVPGSAVLV FDIELLELVA GLPEGYMFIW ENSP00000242209/1-570 GEKRTVIIPP HLGYGEAGVD GEVPGSAVLV FDIELLELVA GLPEGYMFIW ENSTTRP00000008489/1-574 GEKRTVIIPP HLGYGEAGVD GEVPGSAVLV FDIELLELVA GLPEGYMFIW ENSBTAP00000033613/1-574 GEKRTVIIPP HLGYGEAGVD GEVPGSAVLV FDIELLELVA GLPEGYMFVW 501 550 bmy_06481T0/1-526 NGEVSANLFE EIDKDGNGEV LLEEFSEYIH AQVASGKGKL APGFDAEMIV BACU005821/1-577 NGEVSANLFE EIDKDGNGEV LLEEFSEYIH AQVASGKGKL APGFDAEMIV ENSP00000242209/1-570 NGEVSPNLFE EIDKDGNGEV LLEEFSEYIH AQVASGKGKL APGFDAELIV ENSTTRP00000008489/1-574 NGEVSANLFE EIDKDGNGEV LLEEFSEYIH AQVASGKGKL APGFDAEMIV ENSBTAP00000033613/1-574 NGEVSANLFE EIDKDGDGEV LLEEFSEYIH AQVASGKGKL APGFDAEMIV 551 600 bmy_06481T0/1-526 KNMFTNQDRN GDGKVTAEEF KLKDQEAKHD EL BACU005821/1-577 KNMFSNQDRN GDGKVTAEEF KLKDQEAKHD EL ENSP00000242209/1-570 KNMFTNQDRN GDGKVTAEEF KLKDQEAKHD EL ENSTTRP00000008489/1-574 KNMFTNQDRN GDGKVTAEEF KLKDQEAKHD EL ENSBTAP00000033613/1-574 KNMFTNQDRN GDGKVTAEEF KLKDQETKHD EL