KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:28 2014 Check: 00 .. Name: ENSP00000358478/1-1162 Len: 1174 Check: 2298 Weight: 1.00 Name: ENSBTAP00000033620/1-1163 Len: 1174 Check: 82 Weight: 1.00 Name: ENSTTRP00000012229/1-1165 Len: 1174 Check: 1200 Weight: 1.00 Name: bmy_10609T0/1-1005 Len: 1174 Check: 8761 Weight: 1.00 Name: BACU002672/1-1166 Len: 1174 Check: 9625 Weight: 1.00 // 1 50 ENSP00000358478/1-1162 MEEVRCPEHG TFCFLKTGVR DGPNKGKSFY VCRADTCSFV RATDIPVSHC ENSBTAP00000033620/1-1163 MEVVRCPEHG TLCLLKTGVR EGPNKGKSFY VCRADTCSFV RATDIPVSHC ENSTTRP00000012229/1-1165 MEVVGCPQHG TLCFLKTGVR DGPNKGKSFY VCPADTCSFV RATDIPVSHC bmy_10609T0/1-1005 MEVVGCPQHG TLCILKTGVR DGPNKGKSFY VCRADTCSFV RATDIPVSHC BACU002672/1-1166 MEVVGCPQHG TLCILKTGVR DGPNKGKSFY VCRADTCSFV RATDIPVSHC 51 100 ENSP00000358478/1-1162 LLHEDFVVEL QGLLLPQDKK EYRLFFRCIR SKAEGKRWCG SIPWQDPDSK ENSBTAP00000033620/1-1163 LLHEDFVVEL QGLSLSQGKK EYRLFFRCVK SKAEGKQWCG NIPWQDPNSK ENSTTRP00000012229/1-1165 LLHEDFAVEL QGLFLSQGEK EYRLFFRCVR SKAEGKQWCG TIPWQDPNSE bmy_10609T0/1-1005 LLHEDFVVEL QGLFLSQGKK EYRLFFRCVR SKAEGKQWCG NIPWQDPNSK BACU002672/1-1166 LLHEDYVVEL QGLFLSQGKK EYRLFFRCVR SKAEGKQWCG NIPWQDPNSK 101 150 ENSP00000358478/1-1162 EHSVSNKSQH ASETFHHSSN WLRNPFKVLD KNQEPALWKQ LIKGEGEEKK ENSBTAP00000033620/1-1163 EHSGASKSQL ASEPSHYPSS HQRNPFKVLD KNQEPSVWKQ FIKGEDEEKT ENSTTRP00000012229/1-1165 EHSVTSKSQH ASEISRYPSS QQRNPFKLID KNQEPSLWKQ FIKGEDEEKT bmy_10609T0/1-1005 EHSVTSKSQH ASEPSHYPSS QQRNPFKLVD KNQEPSLQKQ FIKGEDEEKT BACU002672/1-1166 EHSVTSKSQH ASEPSRYPSS QQRNPFKLVD KNQEPSLRKQ FIKGEDEEKT 151 200 ENSP00000358478/1-1162 ADKKQREKGD QLFDQKKEQK PEM---MEKD LSSGLVPKKK QSVVQEKKQE ENSBTAP00000033620/1-1163 ADKKQREKGD PLLDPKKEQK PESKCWTEKE LSSGLGVKKK QSAIQDKQQR ENSTTRP00000012229/1-1165 ADKKQREKRD PLLDQKKEQK PESKCWMEED LSSGLVVKEK QSAVQEMQRG bmy_10609T0/1-1005 AGRKQREKGD PLLDQKKEQK PESKCWMEKD LSSGLAVKEK QSAVRETRQG BACU002672/1-1166 AGRKQREKGD PLLDQKKEQK PESKCWMEKD LSSGLAVKKK QSAVQETRRG 201 250 ENSP00000358478/1-1162 EGAEIQCEA- ETGGTHKRDF SEIKSQQCQG NELTRPSASS QEKSSGKSQD ENSBTAP00000033620/1-1163 EKTEFQCEAK EIEGMHKRNL LEMKSKQVRG NVLREPSA-F QVKSDSESHS ENSTTRP00000012229/1-1165 EKTEFRSAAK EVEGVHKRNL FEMKSKQVRG NELREPSA-S QEKSNGERHS bmy_10609T0/1-1005 EKTEFHSAAK EVEGMHKXNL FEMKSKQVXG NELRGPSA-S QEKSNGESHS BACU002672/1-1166 EKTEFHSAAK EVEGMHKRNL SEMKSKQVRG SELRGPSA-S QEKSNGESHS 251 300 ENSP00000358478/1-1162 VQRESEPLRE KVTQLLPQNV HSHNSISKPQ KGGPLNKEY- TNWEAKETKA ENSBTAP00000033620/1-1163 VQKESEPPTE EETKPLPPIV HSQHSISQPL KEEHLNKEHP KSWEARETKT ENSTTRP00000012229/1-1165 LQKESEPPRE KETKPLPRIV HSQHPISQSL KGGHLSKEHP KSWEARETKA bmy_10609T0/1-1005 VQKESEPPRE KETKTLPRIV HSQHSISQPL KGGHLSKEHP KNWEARETKA BACU002672/1-1166 VQKESEPPRE KETETLPRIV HSQHPISQPL KGGHLSKEHP KNWEARETKA 301 350 ENSP00000358478/1-1162 KDGPSIQATQ KSLPQGHFQE RPETHSVPAP GGPAAQAAPA APGLSLGEGR ENSBTAP00000033620/1-1163 GNDPSTQTLQ KSLLQGHFQA QSETRDMPAP KEPAAQPAPL ATGHPAGEGR ENSTTRP00000012229/1-1165 KKDASTQTLQ KSLLQGHLQA QPETRGTPAP KGPAAQPAPL AAGHPQGEMR bmy_10609T0/1-1005 KNDPSTQTRH KSLLQGHLQA QLETRDTPAP KGPAAQPAPP AAGHPQGERR BACU002672/1-1166 KNDPSTQTRH KSLLQGHLQA QLEARDTPAP KGPAAQPAPP AAGHPQGERR 351 400 ENSP00000358478/1-1162 EAATSSDDEE EDDVVFVSSK PGSPLLFDST LDLETKENLQ FPDRSVQRKV ENSBTAP00000033620/1-1163 DAGTSSGDSE DDDVVFVSSK PRSPLLFDLP PDTQEKKNLE LPGQSVQRKV ENSTTRP00000012229/1-1165 DADTSSGDSE EGDVVFFSSK PGSPLLFDLT LDSQKKKNLK FPGQSVQRKI bmy_10609T0/1-1005 DADTSGGDSE EDDVVFVSSK PGSPLLFDLT LDSQKKENLK CPGQSVQRKI BACU002672/1-1166 DADTSGGDSE EGDVVFVSSK PGSPLLFDLT LDSQKKEHLK CPGQSVQRKI 401 450 ENSP00000358478/1-1162 SPASGVSKKV EPSDPVARRV YLTTQLKQKK STLASVNIQA LPDKGQKLIK ENSBTAP00000033620/1-1163 SSAPGVSKKG EPSDPAAQRV FLTTQLQQRK STLASVNIQA LPDKGQKLFK ENSTTRP00000012229/1-1165 SPDSGVSKK- EPSDPEAQRV YLTTQLKQKK STLASVNIQA LPDKGQKLFK bmy_10609T0/1-1005 PPDSGVSKKE ESSDPAAQRV YLTTQLKQKQ RTLASVNIQA LPDKGQKLFK BACU002672/1-1166 PPDSGVSKKG ESSDPAAQHV YLTTQLKQKK RTLASVNIQA LPDKGQKLFK 451 500 ENSP00000358478/1-1162 QIQELEEVLS GLTLSPEQGT NEKSNSQVPQ QSHFTKTTTG PPHLVPPQPL ENSBTAP00000033620/1-1163 QIQELEEVLS ALALSPEQDT KEKSNTQEPQ QSNFIKETTH PPHLVPPKPL ENSTTRP00000012229/1-1165 QLQELEDALS ALALSPEQGT NEKSNTQVPQ QSNFTQTTTD PPHLVPPKPL bmy_10609T0/1-1005 QLQELEDALS ALALSPEQGT NEKSNTQVPQ QSNFTKTTTD PPHLVPPKPL BACU002672/1-1166 QLQELEDALS ALALSPEQGT NEKSNTQVPQ QSNFTKTTTD PPQLVPPKPL 501 550 ENSP00000358478/1-1162 PRRGTQPVGS LELKSACQVT AGGSSQCYRG HTNQDHVHAV WKITSEAIGQ ENSBTAP00000033620/1-1163 QGQDLWPLGS RGLKAAHQEA AGGSGQCCGG AVSQNGLHAV WKITSEAIDE ENSTTRP00000012229/1-1165 QGRDLQPLGC LGLKAARQEA AGGSDQXXXX PMSQGHLRAV WQITSEAIDE bmy_10609T0/1-1005 QGRDLQPLGC LGPKAAHQEA AGGSDQCCGG PMSQDRLRSV WQITGEAIDE BACU002672/1-1166 QGRDLQPLGC LGLKAARQEA AGGSDQCCGG PMSQDRLRSV WQITSEAIDE 551 600 ENSP00000358478/1-1162 LHRSLESCPG ETVVAEDPAG LKVPLLLHQK QALAWLLWRE SQKPQGGI-- ENSBTAP00000033620/1-1163 LHRSLESCPG ETAMAEDPAG LKISLLPHQK QALAWLLWRE SQKPRGGI-- ENSTTRP00000012229/1-1165 LHRSLESRPG ETAVAEDPAG LKIPLLPHQK QALAWLLWRE GQKPRGGI-- bmy_10609T0/1-1005 LHRSLESRPG ETAVAEDPAG LKVPQGCKGI AALSGLVGVK VHVQPVYLSY BACU002672/1-1166 LHRSLESRPG ETAVAEDPAG LKIPLLLHQK QALAWLLWRE SQKPRGGI-- 601 650 ENSP00000358478/1-1162 -----LADDM GLGKTLTMIA LILTQKNQEK KEEKEKSTAL TWLSKDDSCD ENSBTAP00000033620/1-1163 -----LADDM GLGKTLTMIA LILTQK---K SKEKDETTAL TWLSKNDSSE ENSTTRP00000012229/1-1165 -----LADDM GLGKTLTMIA LILTQKNQEK NKEKDKTTAL AWLSKNDSSE bmy_10609T0/1-1005 LCFYFPADDM GLGKTLTMIA LILTQKNQXK NKEKDKTTAL AWLSKNDSSE BACU002672/1-1166 -----LADDM GLGKTLTMIA LILTQKNQEK NKEKDKTTAL AWLSKNDSSE 651 700 ENSP00000358478/1-1162 FTSHGTLIIC PASLIHHWKN EVEKRVNSNK LRVYLYHGPN RDSRARVLST ENSBTAP00000033620/1-1163 FTSHGTLIIC PASLIHHWKN EVEKHVSHNR LRVCLYHGPN RNQHAKVLST ENSTTRP00000012229/1-1165 FTSHGTLVIC PASLIHHWKS EVEKRVSSNK LRVYLYHGPN RDQHAKVLST bmy_10609T0/1-1005 FTSHGTLIIC PASLIHHWKN EVEKCVSNNK LRVYLYHGPN RDQRAKALST BACU002672/1-1166 FPSHGTLIIC PASLIHHWKN EVEKCVSNNK LRVYLYHGPN RDQRAKALST 701 750 ENSP00000358478/1-1162 YDIVITTYSL VAKEIPTNKQ EAEIPGANLN VEGTSTPLLR IAWARIILDE ENSBTAP00000033620/1-1163 YDIVITTYSL LAKEIPTAKQ DEQIPGANPS VEGTSSPLLR VVWARLILDE ENSTTRP00000012229/1-1165 YDIVVTTYSL LAKEIPTKKE EGEMPGANLS VKGVSSPLLR VVWARIILDE bmy_10609T0/1-1005 FDIVVTTYSL LAKEIPTKKQ EGEMPGANLS VEGISSPLLR VVWARIILDE BACU002672/1-1166 YDIVVTTYSL LAKEIPTKKP EGKMPGANLS VEGISSPLLR VVWARIILDE 751 800 ENSP00000358478/1-1162 AHNVKNPRVQ TSIAVCKLQA CARWAVTGTP IQNNLLDMYS LLKFLRCSPF ENSBTAP00000033620/1-1163 AHNVKNPRVQ TSMAVCKLQA QARWAVTGTP IQNNLLDMYS LLKFLRCSPF ENSTTRP00000012229/1-1165 AHNVKNPRVQ TSLAVCKLQA QARWAVTGTP IQNNLLDMYS LLKFLRCSPF bmy_10609T0/1-1005 AHNVKNPRVQ TSLAVCKLQA QARWAVTGTP IQNNLLDVYS LLKFLRCSPF BACU002672/1-1166 AHNVKNPRVQ TSLAVCKLQA QARWAVTGTP IQNNLLDVYS LLKFLRCSPF 801 850 ENSP00000358478/1-1162 DEFNLWRSQV DNGSKKGGER LSILTKSLLL RRTKDQLDST GRPLVILPQR ENSBTAP00000033620/1-1163 DEFKLWKSQV DNGSKKGGER LNILTRSLLL RRTKDQLDST GKPLVVLPHR ENSTTRP00000012229/1-1165 DELSLWRSQV DNGSKKGEER LNILTKSLLL RRTKDQLDPT GKPLVVLPQR bmy_10609T0/1-1005 DELSLWRSQV DNGSKKGEER LNILTKSLLL RRTKDQLDPT GKPLVVLPQR BACU002672/1-1166 DELSLWRSQV DNGSKKGEER LNILTKSLLL RRTKDQLDPT GKPLVVLPQR 851 900 ENSP00000358478/1-1162 KFQLHHLKLS EDEETVYNVF FARSRSALQS YLKRHESRGN QSGRSPNNPF ENSBTAP00000033620/1-1163 KFQLHHLKLS EDEETVYSVL FARSRLALQY YLKRHESGSS QSGRSPDNPF ENSTTRP00000012229/1-1165 KFQLHHLKLS EDEENVYSVL FARSRSALQS YLKRHESGGS QSGRSSDNPF bmy_10609T0/1-1005 KFQLHHLKLS EDEENVYSVL FARSRSALQS YLKRHESGGS QSGRSPDNPF BACU002672/1-1166 KFQLHHLKLS EDEENVYSVL FARSRSALQS YLNRHESGGS QSGRSLDNPF 901 950 ENSP00000358478/1-1162 SRVALEFGSE EPRHSEAADS PRSSTVHILS QLLRLRQCCC HLSLLKSALD ENSBTAP00000033620/1-1163 NRVAQEFGSS GPGPSTAGSQ ATSSAVHILS QLLRLRQCCC HLSLLKSALD ENSTTRP00000012229/1-1165 SRVAQEFGSS VPGLSVAADS QTSSTAHILS QLLRLRQCCC HLSLLKSALD bmy_10609T0/1-1005 SRVAQEFGSS GPGCSVAADS QTSSTAHILS QLLRLRQCCC HLSLLKSALD BACU002672/1-1166 SRVAQEFGSS GPGLSVAADS QTSSTAHILS QLLRLRQCCC HLSLLKSALD 951 1000 ENSP00000358478/1-1162 PMELKGEGLV LSLEEQLSAL TLSELRDSEP SSTVSLNGTF FKMELFEGMR ENSBTAP00000033620/1-1163 PTELKSEGLA LSLEEQLSAL TLSEFHDSEP SASVSLNGKS FKVELFDDKR ENSTTRP00000012229/1-1165 LKELKSEGLV LSLEEQLRDL TLSEFHNSEP SASISLNGKC FNVELFDDRR bmy_10609T0/1-1005 PKELKSEGLV LSLDEQLRAL TLSEFHNSEP SASVSLNGKC FKVELFDDRR BACU002672/1-1166 PKELKSEGLV LSLDEQLRAL TLSEFHNSEP SASVSLNGKC FKVELFDDRR 1001 1050 ENSP00000358478/1-1162 ESTKISSLLA ELEAIQRNSA SQKSVIVSQW TNMLKVVALH LKKHGLTYAT ENSBTAP00000033620/1-1163 ESTKISSLLA ELEAVRRNSG SQKSVIVSQW TSMLKVVALH LKRCGFTYAT ENSTTRP00000012229/1-1165 ESTKXXXXXX XXXXXXXXXX XXXXVIVSQW TSMLKVVTLH LKRHGLTYST bmy_10609T0/1-1005 ESTKVV---- ---------- ---------- ---------- ---------- BACU002672/1-1166 ESTKISSLLA ELEAIRRNSG SQKSVIVSQW TSMLKVVTLH LKRHGLTYST 1051 1100 ENSP00000358478/1-1162 IDGSVNPKQR MDLVEAFNHS RGPQVMLISL LAGGVGLNLT GGNHLFLLDM ENSBTAP00000033620/1-1163 IDGSVNPKQR MDLVEAFNSP RGPQVMLISL LAGGVGLNLT GGNHLFLLDM ENSTTRP00000012229/1-1165 IDGSVNPKQR MDLVEAFNKS RGPQVMLISL LAGGVGLNLT GGNHLFLLDM bmy_10609T0/1-1005 ---------- ---------- ---------- ---------- ---------- BACU002672/1-1166 IDGSVNPKQR MDLVEAFNNS RGPQVMLISL LAGGVGLNLT GGNHLFLLDM 1101 1150 ENSP00000358478/1-1162 HWNPSLEDQA CDRIYRVGQQ KDVVIHRFVC EGTVEEKILQ LQEKKKDLAK ENSBTAP00000033620/1-1163 HWNPSLEDQA CDRIYRVGQQ KDVVIHKFVC EETVEEKILQ LQEKKKDLAK ENSTTRP00000012229/1-1165 HXXXXXXXXX XXXXXXXXXX XXXXXXXFVC EGTVEEKILQ LQEKKRDLAK bmy_10609T0/1-1005 ---------- ---------- ---------- ---------- ---------- BACU002672/1-1166 HWNPSLEDQA CDRIYRVGQQ EDVVIHRFVC EGTVEEKILQ LQDKKKDLAK 1151 1200 ENSP00000358478/1-1162 QVLSGSGESV TKLTLADLRV LFGI ENSBTAP00000033620/1-1163 QILSGSEEFV TKLSLADLKV LFGI ENSTTRP00000012229/1-1165 QILSGTGEVV TKLTLADLKV LFGI bmy_10609T0/1-1005 ---------- ---------- ---- BACU002672/1-1166 QILSGSGEVV TKLTLADLKV LFGI