KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:33 2014 Check: 00 .. Name: ENSP00000265715/1-780 Len: 1247 Check: 9612 Weight: 1.00 Name: ENSBTAP00000033692/1-782 Len: 1247 Check: 4317 Weight: 1.00 Name: ENSTTRP00000006463/1-776 Len: 1247 Check: 9547 Weight: 1.00 Name: bmy_12510T0/1-773 Len: 1247 Check: 7331 Weight: 1.00 Name: BACU008790/1-1202 Len: 1247 Check: 289 Weight: 1.00 // 1 50 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 ---------- ---------- ---------- ---------- ---------- BACU008790/1-1202 MVLSKCLIKV LYALRLAFRT LVRKYSCDLC YTPMIVAADF IRSIKARDSE 51 100 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 ---------- ---------- ---------- ---------- ---------- BACU008790/1-1202 FTTNQGDCPL IVQFAANDAR ILSDAARIVC PYANGIDINC GCPQRWALAE 101 150 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 ---------- ---------- ---------- ---------- ---------- BACU008790/1-1202 GYGACLINNP ELVRDMVKQV RNQVENPRFS VSIKIRIHDD LTRTVDLCRK 151 200 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 ---------- ---------- ---------- ---------- ---------- BACU008790/1-1202 AEATGVSWIT VHGRTVEERH QPVHYEAIKI IKESMSIPVI ANGDIRSLKE 201 250 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 ---------- ---------- ---------- ---------- ---------- BACU008790/1-1202 AENVWHITGT DDAVREVRKY SSTHAIERSS ASRPSAYEHT QMKLFRSQRN 251 300 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 ---------- ---------- ---------- ---------- ---------- BACU008790/1-1202 LYITGFSLFF WLVLRRLVTL ITQLAKELSN KGVLKVQAEN TNQAAKKFME 301 350 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 ---------- ---------- ---------- ---------- ---------- BACU008790/1-1202 ENERLKRLLK NHGKEEEHIL EAENKKLAED KEKLKTELKK ASDALSKAQN 351 400 ENSP00000265715/1-780 ---------- ---------- ---------- ---------- --MAAPGGRS ENSBTAP00000033692/1-782 ---------- ---------- ---------- ---------- --MAAPGDRL ENSTTRP00000006463/1-776 ---------- ---------- ---------- ---------- --MAAPGGRL bmy_12510T0/1-773 ---------- ---------- ---------- ---------- --MAAPGGRL BACU008790/1-1202 DMTMMKMQSE RLSKEYDRLL KEHSELQMNE KKHQKNQRVS QVMAAPGGRL 401 450 ENSP00000265715/1-780 EPPQLPEYSC SYMVSRPVYS ELAFQQQHER RLQERKTLRE SLAKCCSCSR ENSBTAP00000033692/1-782 EPPPLPEYSC SYVVSRPVYN ELAFQQQYEQ RPKERKTLRE NLAQGCSCSR ENSTTRP00000006463/1-776 EPPPLPEYSC SYVVSRPVYS ELAFQQQYER RLQERKTLRE SLAKGCSCSR bmy_12510T0/1-773 EPPPLPEYSC SYVVSRPVYS ELAFQQQYER RLQERKTLRE SLAKGCSCSR BACU008790/1-1202 EPPPLPEYSC SYVVSRPVYS ELAFQQQYER RLQERKTLRE SLAKGCSCSR 451 500 ENSP00000265715/1-780 KRAFGVLKTL VPILEWLPKY RVKEWLLSDV ISGVSTGLVA TLQGMAYALL ENSBTAP00000033692/1-782 KRTLRMVKTL LPILDWLPKY RIKEWLLSDI ISGVSTGLVG TLQGMAYALL ENSTTRP00000006463/1-776 KRTLGVLKTL LPILDWLPKY RIKEWLLSDT ISGFSTGLVG TLQGMAYALL bmy_12510T0/1-773 KRTLGVLKTL LPILDWLPKY QIKEWLLNDT ISGVSTGLVG TLQGMAYALL BACU008790/1-1202 KRTLGVLKTL LPILDWLPKY RIKEWLLNDT ISGVSTGLVG TLQG------ 501 550 ENSP00000265715/1-780 AAVPVGYGLY SAFFPILTYF IFGTSRHISV GPFPVVSLMV GSVVLSMAPD ENSBTAP00000033692/1-782 AAVPVGYGLY SAFFPILTYF IFGTSRHISV GPFPVVSLMV GSVVLSMAPD ENSTTRP00000006463/1-776 AAVPVGYGLY SAFFPILTYF IFGTSRHISV GPFPVVSLMV GSVVLSMAPD bmy_12510T0/1-773 AAVPVGYGLY SAFFPILTYF IFGTSRHISV GPFPVVSLMV GSVVLSMAPD BACU008790/1-1202 ---------- ---------- ---------- -PFPVVSLMV GSVVLSMAPD 551 600 ENSP00000265715/1-780 EHFLVSSSNG TVLNTTMIDT AARDTARVLI ASALTLLVGI IQLIFGGLQI ENSBTAP00000033692/1-782 EHFLVSSSNG TALNTTIIDF AARDAARVLI ASTLTLLVGI IQLIFGGLQI ENSTTRP00000006463/1-776 EHFLMSSSNG TTLNTTMIDS AARDAARVLI ASTLTLLVGI IQLIFGGLQI bmy_12510T0/1-773 EHFLVSSSNG TTLNTTMIDS AARDAARVLI ASTLTLLVGI IQLIFGGLQI BACU008790/1-1202 EHFLVSSSNG TTLNTTMIDS AARDAARVLI ASTLTLLVGI IQLIFGGLQI 601 650 ENSP00000265715/1-780 GFIVRYLADP LVGGFTTAAA FQVLVSQLKI VLNVSTKNYN GVLSIIYTLV ENSBTAP00000033692/1-782 GFIVRYLADP LVGGFTTAAA FQVLVSQLKI VLNVSTKNYN GILSIIYTLI ENSTTRP00000006463/1-776 GFIVRYLADP LVGGFTTAAA FQVLVSQLKI VLNVSTKNYN GILSIIYTLI bmy_12510T0/1-773 GFIVRYLADP LVGGFTTAAA FQVLVSQLKI VLNVSTKNYN GILSIIYTLI BACU008790/1-1202 GFIVRYLADP LVGGFTTAAA FQVLVSQLKI VLNVSTKNYN GILSIIYTLI 651 700 ENSP00000265715/1-780 EIFQNIGDTN LADFTAGLLT IVVCMAVKEL NDRFRHKIPV PIPIEVIVTI ENSBTAP00000033692/1-782 EIFQNISNTN LADFIAGLLT IIICMAVKEL NDRFKHKIPV PIPIEVIVTI ENSTTRP00000006463/1-776 EIFQNIGNTN LADFLAGLLT IIICMAVKEL NDRFKHKIPV PIPIEVIVTI bmy_12510T0/1-773 EIFQNIGNTN LADFIAGLLT IIICMAVKEL NDRFKHKIPV PIPIEVIVTI BACU008790/1-1202 EIFQNIGNTN LADFIAGLLT IIICMAVKEL NDRFKHKIPV PIPIEVIVTI 701 750 ENSP00000265715/1-780 IATAISYGAN LEKNYNAGIV KSIPRGFLPP ELPPVSLFSE MLAASFSIAV ENSBTAP00000033692/1-782 AATAISYGVD LEKKYNAGIV KSIPSGFLPP AMPSVSLFSE MLTASFSISV ENSTTRP00000006463/1-776 IATAISYGVD LEKNYNAGIV KSIPSGFLPP AIPSVSLFSE MLTASFSIAV bmy_12510T0/1-773 IATAISYGVD LEKNYNAGIV KSIPSGFLPP AIPSVSLFSE MLTASFSIAV BACU008790/1-1202 IATAISYGVD LEKNYNAGIV KSIPSGFLPP AIPSVSLFSE MLTASFSIAV 751 800 ENSP00000265715/1-780 VA-------- ---------- ---------- ---------- ---------- ENSBTAP00000033692/1-782 VA-------- ---------- ---------- ---------- ---------- ENSTTRP00000006463/1-776 VA-------- ---------- ---------- ---------- ---------- bmy_12510T0/1-773 VA-------- ---------- ---------- ---------- ---------- BACU008790/1-1202 VAYAIAVSVG KVYAIKYDYT IDGNQEFIAF GISNIFSGFF SCFVATTALS 801 850 ENSP00000265715/1-780 ---------- ---------- -----YAIAV SVGKVYATKY DYTIDGNQEF ENSBTAP00000033692/1-782 ---------- ---------- -----YAIAV SVGKVYAIRH DYTIDGNQEF ENSTTRP00000006463/1-776 ---------- ---------- -----YAIAV SVGKVYAIKY DYTIDGNQEF bmy_12510T0/1-773 ---------- ---------- -----YAIAV SVGKVYAIKY DYTIDGNQEF BACU008790/1-1202 RTAVQESTGG KTQMLTASFS IAVVAYAIAV SVGKVYAIKY DYTIDGNQEF 851 900 ENSP00000265715/1-780 IAFGISNIFS GFFSCFVATT ALSRTAVQES TGGKTQVAGI ISAAIVMIAI ENSBTAP00000033692/1-782 IAFGISNIFS GLFSCFVATT ALSRTAVQES TGGKTQVAGI ISAGVVMIAI ENSTTRP00000006463/1-776 IAFGISNIFS GFFSCFVATT ALSRTAVQES TGGKTQVAGM ISAGIVMIAI bmy_12510T0/1-773 IAFGISNIFS GFFSCFVATT ALSRTAVQES TGGKTQVAGI ISAGIVMIAI BACU008790/1-1202 IAFGISNIFS GFFSCFVATT ALSRTAVQES TGGKTQVAGI ISAGIVMIAI 901 950 ENSP00000265715/1-780 LALGKLLEPL QKSVLAAVVI ANLKGMFMQL CDIPRLWRQN KIDAVIWVFT ENSBTAP00000033692/1-782 VALGKLLEPL QKSVLAAVVI ANLKGMFMQV CDVPHLWRQN KTDAVIWVFT ENSTTRP00000006463/1-776 VALGKLLEPL QKSVLAAVVI ANLKGMFMQV CDIPRLWRQN KTDAVIWVFT bmy_12510T0/1-773 VALGKFLEPL QKSVLAAVVI ANLKGMFMQV CDIPRLWRQN KTDAVIWVFT BACU008790/1-1202 VALGKFLEPL QKSVLAAVVI ANLKGMFMQV CDIPRLWRQN KTDAVIWVFT 951 1000 ENSP00000265715/1-780 CIVSIILGLD LGLLAGLIFG LLTVVLRVQF PSWNGLGSIP STDIYKSTKN ENSBTAP00000033692/1-782 CMASIILGLD LGLLAGLVFG FLTVVLRVQF PSWNSLGSIP STDIYKSTKN ENSTTRP00000006463/1-776 CVASIILGLD LGLLAGLIFG FLTVVLRVQF PSWNSLGSIP STDIYKSTKH bmy_12510T0/1-773 CIASIILGLD LGLLAGLIFG FLTVVLRVQF PSWNSLGSIP STDIYKSTKN BACU008790/1-1202 CVASIILGLD LGLLAGLIFG FLTVVLRVQF PSWNSLGSIP STDIYKSTKN 1001 1050 ENSP00000265715/1-780 YKNIEEPQGV KILRFSSPIF YGNVDGFKKC IKSTVGFDAI RVYNKRLKAL ENSBTAP00000033692/1-782 YKNIEELEGV KILRFSSPIF YGNVDGLKKC IKSTVGFDAI RVYNKRLKAL ENSTTRP00000006463/1-776 YKNIEEPEGV KILRFSSPIF YGNVDGLKKC IKSTVGFDAI RVYNKRLKAL bmy_12510T0/1-773 YKNIEEPEGV KILRFSSPIF YGNVDGLKKC IKSTVGFDAI RVYNKRLKAL BACU008790/1-1202 YKNIEEPEGV KILRFSSPIF YGNVDGLKKC IKSTVGFDAI RVYNKRLKAL 1051 1100 ENSP00000265715/1-780 RKIQKLIKSG QLRATKNGII SDAVSTNNAF EPDEDIEDLE ELDIPTKEIE ENSBTAP00000033692/1-782 RKIQKLIKKG QLRATKNGII SGAGSSNNAF EPDEDIENPE EPDIPTKEIE ENSTTRP00000006463/1-776 RKIQKLIKKG QLRATKXXXX XXXXXXXXXX XXXXXXXXXE E-DIPTKEIE bmy_12510T0/1-773 RKIQKLIKKG QLRATKNGII SDAGSSNNAF EPDEDIENPE EFDIPTKEIE BACU008790/1-1202 RKIQKLIKKG QLRATKNGII SDAGSSNNAF EPDEDIENPE EFDIPTKEIE 1101 1150 ENSP00000265715/1-780 IQVDWNSELP VKVNVPKVPI HSLVLDCGAI SFLDVVGVRS LRVIVKEFQR ENSBTAP00000033692/1-782 IQVDWNSELP VKVNVPKVPI HSLVLDCGAV SFLDVVGVRS LRVIVKEFQR ENSTTRP00000006463/1-776 -QVD-NAEL- VKVNVPKVPI HSLVLDCGAV SFLDVVGVRS LRVIVKEFQR bmy_12510T0/1-773 IQVDWNTELP IKVNVPKVPI HSLVLDCGAV SFLDVVGVRS LRVIVKEFQR BACU008790/1-1202 IQVDWNAELP IKVNVPKVPI HSLVLDCGAV SFLDVVGVRS LRVIVKEFQR 1151 1200 ENSP00000265715/1-780 IDVNVYFASL Q-DYVIEKLE QCGFFDD-NI RKDTFFLTVH DAILYLQNQV ENSBTAP00000033692/1-782 IDVNVYFASL QEDHVIEKLE KCGFFNDNNI RKDIFFMTVH DAVLHLQNQV ENSTTRP00000006463/1-776 IDVNVYFASL Q-DHVIEKLE KCGFFND-NI RKDIFFLTVH DAVLHLQNQV bmy_12510T0/1-773 IDVNVYFASL Q-DHVIEKLE KCGFFND-NI RKDIFFLTVH DAVLHLQNQV BACU008790/1-1202 IDVNVYFASL Q-DHVIEKLE KCGFFND-NI RKDIFFLTVH DAVLHLQNQV 1201 1250 ENSP00000265715/1-780 KSQEGQGSIL ETITLIQDCK DTLELIETEL TEEELDVQDE AMRTLAS ENSBTAP00000033692/1-782 KSQEVQDSIL ETITLIQDCK DPLELMEAEM IEEQLDVQDE AIRRLAS ENSTTRP00000006463/1-776 KSQEVQDSIL ETITLIQDCK DPLELMEAEL IEEGLDVQDE AMRRLAS bmy_12510T0/1-773 KSQEVQDSIL ETITLIQDCK DPLELMEAEL IEEELDVQDE ------- BACU008790/1-1202 KSQEVQDSIL ETITLIQDCK DPLELMEAEL IEEELDVQDE V------