KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:38 2014 Check: 00 .. Name: ENSP00000405537/1-1118 Len: 1119 Check: 7630 Weight: 1.00 Name: ENSTTRP00000015931/1-1117 Len: 1119 Check: 5841 Weight: 1.00 Name: ENSBTAP00000033723/1-1085 Len: 1119 Check: 7178 Weight: 1.00 Name: bmy_13050T0/1-1071 Len: 1119 Check: 1839 Weight: 1.00 Name: BACU003208/1-1087 Len: 1119 Check: 1205 Weight: 1.00 // 1 50 ENSP00000405537/1-1118 MPAVASVPKE LYLSSSLKDL NKKTEVKPEK ISTKSYVHSA LKIFKTAEEC ENSTTRP00000015931/1-1117 MPAVASVPKE LYLSSSLKDL NKKTEVKPEK ISTRNYVQSA LKIFKTAEES ENSBTAP00000033723/1-1085 MPAVASVPKE LYLSSSLKDL NKKTEVKPEK ISTKNYVQSA LKIFKTAEES bmy_13050T0/1-1071 MPAVASVPKE LYLSSSLKDL NKKTEVKPEK ISTRNYVQSA LKIFKTAEES BACU003208/1-1087 MPAVASVPKE LYLSSSLKDL NKKTEVKPEK ISTRNYVQSA LKIFKTAEES 51 100 ENSP00000405537/1-1118 RLDRDEERAY VLYMKYVTVY NLIKKRPDFK QQQDYFHSIL GPGNIKKAVE ENSTTRP00000015931/1-1117 RLDRDEERAY VLYMKYVTVY NLIKKRPDFK QQQDYFHSIL GPANIKKAIE ENSBTAP00000033723/1-1085 RLDRDEERAY VLYMKYVTVY NLIKKRPDFM QQQDHFHSIL GPANIKKAIE bmy_13050T0/1-1071 RLDRDEERAY VLYMKYVTVY NLIKKRPDFK QQQDYFHSIL GPANIKKAIE BACU003208/1-1087 RLDRDEERAY VLYMKYVTVY NLIKKRPDFK QQQDYFHSIL GPANIKKAIE 101 150 ENSP00000405537/1-1118 EAERLSESLK LRYEEAEVRK KLEEKDRQEE AQRLQQKRQE TGREDGGTLA ENSTTRP00000015931/1-1117 EAERLSESLK LRYEEAEVRK KLEEKDRQEK EQLQKQKRQE TGREDGGTSA ENSBTAP00000033723/1-1085 EAERLSESLK LRYEEAEVRK KLEEKDRQEK EQLQKQKKQE AEREDDSTSD bmy_13050T0/1-1071 EAERLSESLK LRYEEAEVRK KLEEKDRQEK ELLQKQKRQE TAREDGGTSA BACU003208/1-1087 EAERLSESLK LRYEEAEVRK KLEEKDRQEK EQLQKQKRQE TGREDGGTSA 151 200 ENSP00000405537/1-1118 KGSLENVLDS KDKTQKSNGE KNEKCETKEK GAITAKELYT MMTDKNISLI ENSTTRP00000015931/1-1117 KSSLENVLDA KDKAHKINGE KSEKNETTEK GAITAKELYT MRMDKNISLI ENSBTAP00000033723/1-1085 KSSLENVLDA KDKTQKINGE KSEKNETTEK GAITAKELYT MMMDKNISLI bmy_13050T0/1-1071 KSSLENVLDA KDKTHKINGE KSEKNETTEK GAITAKELYT MRMDKNISLI BACU003208/1-1087 KSSLENVLDA KDKTHKTNGE KSEKNETTEK GAITAKELYT MRMDKNISLI 201 250 ENSP00000405537/1-1118 IMDARRMQDY QDSCILHSLS VPEEAISPGV TASWIEAHLP DDSKDTWKKR ENSTTRP00000015931/1-1117 IMDARRMQDY LDSHISNSLS VPEEAISPGV TASWIEANLP DDSKDTWKKR ENSBTAP00000033723/1-1085 IMDARRMQDY LDSHISDSLS VPEEAISPGV TASWIEANLP DDSKDTWKKR bmy_13050T0/1-1071 IMDARRMQDY LDSHISNSLS VPEEAISPGV TASWIEANLP DDSKDTWKKR BACU003208/1-1087 IMDARRMQDY LDSHISDSLS VPEEAISPGV TASWIEANLP DDSKDTWKKR 251 300 ENSP00000405537/1-1118 GNVEYVVLLD WFSSAKDLQI GTTLRSLKDA LFKWESKTVL RNEPLVLEGG ENSTTRP00000015931/1-1117 GNVDYVVLLD WFSTAKDLQL GTTLRSLKDA LFKWESKTVL HNEPLVLEGG ENSBTAP00000033723/1-1085 GSVDYVVLLD WFSSAKDLQL GTTLRSLKDA LFKWESKAVL RSEPLVLEGG bmy_13050T0/1-1071 GNVDYVVLLD WFSTAKDLQL GTTLRSLKDA LFKWESKTVL HNEPLVLEGG BACU003208/1-1087 GNVDYVVLLD WFSTAKDLQL GTTLRSLKDA LFKWESKTVL HNEPLVLEGG 301 350 ENSP00000405537/1-1118 YENWLLCYPQ YTTNAKVTPP PRRQNEEVSI SLDFTYPSLE ESIPSKPAAQ ENSTTRP00000015931/1-1117 YENWLLCYPQ YTTNAKVTPP PRGKNEEVSV SLHFTYPSLE ESVPSXXXXX ENSBTAP00000033723/1-1085 YENWLLCYPQ YTTNAKVTPP PRGKNEEVSV SLDFTYPSLE ESVPSKPTAQ bmy_13050T0/1-1071 YENWLLCYPQ YTTNAKVTPP PRGKNEEVSV SLDFTYPSLE ESVPSKPTAQ BACU003208/1-1087 YENWLLCYPQ YTTNAKVTPP PRGKNEEVSV SLDFTYPSLE ESVPSKPTAQ 351 400 ENSP00000405537/1-1118 TPPASIEVDE NIELISGQNE RMGPLNISTP VEPVAASKSD VSPIIQPVPS ENSTTRP00000015931/1-1117 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000033723/1-1085 MIP-PIEISE NTELINSQDE RMGPLNISAP VEPIAASKYD VSPIIQPVPI bmy_13050T0/1-1071 ITP-PTEVNE NIEVINNQDE RVGPLNISTP VEPIAASKSD VSPIIQPVPI BACU003208/1-1087 ITP-PTEVNE NIEVINNQDE RVGPLNISTP VEPIAASKSD VSPIIQPVPI 401 450 ENSP00000405537/1-1118 IKNVPQIDRT KKPAVKLPEE HRIKSESTNH EQQSPQSGKV IPDRSTKPVV ENSTTRP00000015931/1-1117 XXXXXXIDRT KKPAVKLPED HRIKSEITDH EQQSPQNGKV VPDRSTKPVF ENSBTAP00000033723/1-1085 LKNIPQIDRS KKPAIKLPED HRIKYESTDH EEQSPQSEKV VPDRSTKPVF bmy_13050T0/1-1071 IKNVPQIDRT KKPAVKLPED YRIKSESTDH EQQSPQNGKV VPDRSTKPVF BACU003208/1-1087 IKNVPQIDRT KKPAVKLPED YRIRSESTDH EQQSPQNGKV VPDRSTKPVF 451 500 ENSP00000405537/1-1118 FSPTLMLTDE EKARIHAETA LLMEKNKQEK ELRERQQEEQ KEKLRKEEQE ENSTTRP00000015931/1-1117 PLPTAMLTDE EKARIHAETA LLMEKNKQEK ELRERQQEEQ KEKLRKEEEE ENSBTAP00000033723/1-1085 PPPTAMLTDE EKARIHAETV LLMEKNKQEK ELRERQQEEQ KERLRREEQE bmy_13050T0/1-1071 PPPTAMLTDE EKARIHAETA LLMEKNKQEK ELRERQQEEQ KEKLRKEEEE BACU003208/1-1087 PPPTAMLTDE EKARIHAETA LLMEKNKQEK ELRERQQEEQ KEKLRKEEEE 501 550 ENSP00000405537/1-1118 QKAKKKQEAE ENEITEKQQK AKEEMEKKES EQAKKEDKET SAKRGKEITG ENSTTRP00000015931/1-1117 QKDRKKQEAE ENEITEKEQK AKEQMEKKES EQAKKEDKET SAKKGREITG ENSBTAP00000033723/1-1085 QKDRKEQEAE ENEITEKQQK A-EQMEKKES EQARKEDKET SAKRGREITG bmy_13050T0/1-1071 QKDRKKQEAE ENEITEKQQK AKEQMEKKES EQAKKEDKET SAKKGREITG BACU003208/1-1087 QKDRKKQEAE ENEITEKQQK AKEQMEKKES EQAKKEDKET SAKKGREITG 551 600 ENSP00000405537/1-1118 VKRQSKSEHE TSDAKKSVED RGKRCPTPEI QKKSTGDVPH TSVTGDSGSG ENSTTRP00000015931/1-1117 VKRQSKSEHE TTDAKKSVED RGKRCPTPEV QKKSTGDVPH ASVAGDSSSG ENSBTAP00000033723/1-1085 VKRQSKSEHE TTDAKKSVED RGKRCPTPEV QKRSA-DVPH ASVAGDSSSG bmy_13050T0/1-1071 VKRQSKSEHE TTDAKKSVED RGKRCPTPEV QKKSTGDVPH AS-------- BACU003208/1-1087 VKRQSKSEHE TTDAKKSVED RGKRCPTPEV QKKSTGDVLH ASVAGDLSSG 601 650 ENSP00000405537/1-1118 KPFKIKGQPE SGILRTGTFR EDTDDTERNK AQREPLTRAR SEEMGRIVPG ENSTTRP00000015931/1-1117 KXXXXXXXXR SGILKTGTFR ENTEGTERYK S-REPLTRAR SEEMGRIVPG ENSBTAP00000033723/1-1085 ---------- ---------- ---------K S-REPLTRAR SEEMGRVVPG bmy_13050T0/1-1071 ---------- ---------- ---------- S-REPLTRAR SEEMGRIVPG BACU003208/1-1087 ---------- ---------- ---------K S-REPLTRAR SEEMGRIVPG 651 700 ENSP00000405537/1-1118 LPSGWAKFLD PITGTFRYYH SPTNTVHMYP PEMAPSSAPP STPPTHKAKP ENSTTRP00000015931/1-1117 LPSGWAKFLD PITGTFRYYH SPTNTVHMYP PEMAPSSAPP STPPTHKAKP ENSBTAP00000033723/1-1085 LPSGWAKFLD PITGTFRYYH SPTNTVHMYP PEMAPSSAPP STPPTHKAKP bmy_13050T0/1-1071 LPSGWAKFLD PITGTFRYYH SPTNTVHMYP PEMAPSSAPP STPPTHKAKP BACU003208/1-1087 LPSGWAKFLD PITGTFRYYH SPTNTVHMYP PEMAPSSAPP STPPTHKAKP 701 750 ENSP00000405537/1-1118 QIPAERDREP SKLKRSYSSP DITQAIQEEE KRKPTVTPTV NRENKPTCYP ENSTTRP00000015931/1-1117 QIPAERDREP SKLKRSYSSP DITQAIQEEE KRRPAVTPTV NRETKPTSYP ENSBTAP00000033723/1-1085 QIPAERDREP SKLKRSYSSP DITQAIQEEE KRRPTVTPAV NRENKPTSYP bmy_13050T0/1-1071 QIPAERDREP SKLKRSYSSP DITQAIQEEE KRRPAITPTV NRENKPTSYP BACU003208/1-1087 QIPAERDREP SKLKRSYSSP DITQAIQEEE KRRPAITPTV NRENKPTSYP 751 800 ENSP00000405537/1-1118 KAEISRLSAS QIRNLNPVFG GSGPALTGLR NLGNTCYMNS ILQCLCNAPH ENSTTRP00000015931/1-1117 KTEITRLSAS QIRNLNPVFG GSGPALTGLR NLGNTCYMNS ILQCLCNTPH ENSBTAP00000033723/1-1085 KAEITRLSAS QIRNLNPVFG GSGPALTGLR NLGNTCYMNS ILQCLCNTPH bmy_13050T0/1-1071 KTEITRLSAS QIRNLNPVFG GSGPALTGLR NLGNTCYMNS ILQCLCNTPH BACU003208/1-1087 KTEITRLSAS QIRNLNPVFG GSGPALTGLR NLGNTCYMNS ILQCLCNTPH 801 850 ENSP00000405537/1-1118 LADYFNRNCY QDDINRSNLL GHKGEVAEEF GIIMKALWTG QYRYISPKDF ENSTTRP00000015931/1-1117 LADYFNRNCY QDDINRSNLL GHKGEVAEEF GIIMKALWTG QYRYISPKDF ENSBTAP00000033723/1-1085 LADYFNRNCY QDDINRSNLL GHKGEVAEEF GIIMKALWTG QYRYISPKDF bmy_13050T0/1-1071 LADYFNRNCY QDDINRSNLL GHKGEVAEEF GIIMKALWTG QYRYISPKDF BACU003208/1-1087 LADYFNRNCY QDDINRSNLL GHKGEVAEEF GIIMKALWTG QYRYISPKDF 851 900 ENSP00000405537/1-1118 KITIGKINDQ FAGYSQQDSQ ELLLFLMDGL HEDLNKADNR KRYKEENNDH ENSTTRP00000015931/1-1117 KITIGKINDQ FAGYSQQDSQ ELLLFLMDGL HEDLNKADNR KRHKEENNDH ENSBTAP00000033723/1-1085 KITIGKINDQ FAGYSQQDSQ ELLLFLMDGL HEDLNKADNR KRHKEENNDH bmy_13050T0/1-1071 KITIGKINDQ FAGYSQQDSQ ELLLFLMDGL HEDLNKADNR KRHKEENNDH BACU003208/1-1087 KITIGKINDQ FAGYSQQDSQ ELLLFLMDGL HEDLNKADXX KRHKEEKYDH 901 950 ENSP00000405537/1-1118 LDDFKAAEHA WQKHKQLNES IIVALFQGQF KSTVQCLTCH KKSRTFEAFM ENSTTRP00000015931/1-1117 LDDFKAAEHA WQKHKQLNES IIVALFQGQF KSTVQCLTCH RKSRTFEAFM ENSBTAP00000033723/1-1085 LDDFKAAEHA WQKHKQLNES IIVALFQGQF KSTVQCLTCH KKSRTFEAFM bmy_13050T0/1-1071 LDDFKAAEHA WQKHKQLNES IIVALFQGQF KSTVQCLTCH KKSRTFEAFM BACU003208/1-1087 LDDFKAAEHA WQKHKQLNES IIVALFQGQF KSTVQCLTCH KKSRTFEAFM 951 1000 ENSP00000405537/1-1118 YLSLPLASTS KCTLQDCLRL FSKEEKLTDN NR-FYCSHCR ARRDSLKKIE ENSTTRP00000015931/1-1117 YLSLPLASTS KCTLQDCLRL FSKEEKLTDN NR-FYCSHCR TRRDSLKKIE ENSBTAP00000033723/1-1085 YLSLPLASTS KCTLQDCLRL FSKEEKLTDN NR-FYCSHCR ARRDSLKKIE bmy_13050T0/1-1071 YLSLPLASTS KCTLQVLLQS LQSSTGFAKK DRNLEVATC- ----TFSASE BACU003208/1-1087 YLSLPLASTS KCTLQDCLRL FSKEEKLTDN NR-FYCSHCR ARRDSLKKIE 1001 1050 ENSP00000405537/1-1118 IWKLPPVLLV HLKRFSYDGR WKQKLQTSVD FPLENLDLSQ YVIGPKNNLK ENSTTRP00000015931/1-1117 IWKLPPVLLV HLKRFSYDGR WKQKLQTSVD FPLENLDLSQ YVIGPKNNLR ENSBTAP00000033723/1-1085 IWKLPPVLLV HLKRFSYDGR WKQKLQTSVD FPLENLDLSQ YVIGPKNNLK bmy_13050T0/1-1071 TCNCCNVMLY S---FSYDGR WKQKLQTSVD FPLENLDLSQ YVIGPKNNLR BACU003208/1-1087 IWKLPPVLLV HLKRFSYDGR WKQKLQTSVD FPLENLDLSQ YVIGPKNNLR 1051 1100 ENSP00000405537/1-1118 KYNLFSVSNH YGGLDGGHYT AYCKNAARQR WFKFDDHEVS DISVSSVKSS ENSTTRP00000015931/1-1117 KYNLFSVSNH YGGLDGGHYT AYCKNAARQR WFKFDDHEVS DISVSSVKSS ENSBTAP00000033723/1-1085 KYNLFSVSNH YGGLDGGHYT AYCKNAARQR WFKFDDHEVS DISISSVKSS bmy_13050T0/1-1071 KYNLFSVSNH YGGLDGGHYT AYCKNAARQR WFKFDDHEVS DISVSSVKSS BACU003208/1-1087 KYNLFSVSNH YGGLDGGHYT AYCKNAARQR WFKFDDHEVS DISVSSVKSS 1101 1150 ENSP00000405537/1-1118 AAYILFYTSL GPRVTDVAT ENSTTRP00000015931/1-1117 AAYILFYTSL GPRVTDVAT ENSBTAP00000033723/1-1085 AAYILFYTSL GPRITDVAT bmy_13050T0/1-1071 AAYILFYTSL GPRVTDVAT BACU003208/1-1087 AAYILFYTSL GPRVTDVAT