KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:39 2014 Check: 00 .. Name: bmy_19543T0/1-627 Len: 872 Check: 3890 Weight: 1.00 Name: BACU010527/1-581 Len: 872 Check: 6013 Weight: 1.00 Name: ENSP00000343656/1-730 Len: 872 Check: 3253 Weight: 1.00 Name: ENSTTRP00000002241/1-730 Len: 872 Check: 9236 Weight: 1.00 Name: ENSBTAP00000033741/1-819 Len: 872 Check: 6863 Weight: 1.00 // 1 50 bmy_19543T0/1-627 ---------- ---------- ---------- ---------- ---------- BACU010527/1-581 ---------- ---------- ---------- ---------- ---------- ENSP00000343656/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002241/1-730 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033741/1-819 WGSGPCQTLS RRISNPYLEH TPSQIYGENS SCAGRALRNI IIVQAADLIK 51 100 bmy_19543T0/1-627 ---------- ---------- ---------- -----MGSSR LRV------- BACU010527/1-581 ---------- ---------- ---------- -----MGSSR LRV------- ENSP00000343656/1-730 ---------- ---------- ---------- ---MAIGVWQ LLLDMGIMLS ENSTTRP00000002241/1-730 ---------- ---------- ---------- ---MAIGVWQ LLLDMGIMSS ENSBTAP00000033741/1-819 DRANLKGFYR RSCVGSELVD WLLEHCPFVQ CRSMAIGVWQ LLLDMGILSS 101 150 bmy_19543T0/1-627 FDPHLERKDS AALS------ ---------- ------GREL PLPTF----- BACU010527/1-581 FDPHLERKDS AALS------ ---------- ------GREL PLPTF----- ENSP00000343656/1-730 VDQHLYFQDT YVFYQFSSDE CSYLYCEFER EEEWQNGVKL LLQLVPLIPA ENSTTRP00000002241/1-730 VDQHLCFQDT YVFYQFSSDE CSYLYCEFER EEAWQNGVKL LLQLVPLIPT ENSBTAP00000033741/1-819 VDQHLYFQDT YVFYQFSSEE CSYLYCEFER EEEWQNGVRL LLQLVPLIPS 151 200 bmy_19543T0/1-627 -----DVPYF KYIDEEGEDE EWSSRSQSPA ---------- ---------- BACU010527/1-581 -----DVPYF KYIDEEGEDE DWSSRSQSPA ---------- ---------- ENSP00000343656/1-730 RGGICELSHQ KIEDSEESSD EILVRLTSAV QRELAAVIAL KARKSAIEQD ENSTTRP00000002241/1-730 RAGICELSHQ KIEDSEESSD EILCRLTSAV QRELAAVIAL KARKSAIEQD ENSBTAP00000033741/1-819 RAGICELSHQ KIEDSEESSD EILARLTSAV QRELAAVIAL KARKSALAQD 201 250 bmy_19543T0/1-627 ---------- ---------- ---------- ---------- ---------- BACU010527/1-581 ---------- ---------- ---------- ---------- ---------- ENSP00000343656/1-730 EENNDKHVAV TEAESVPDSQ AGVMCKLQER DEIGRIELVQ KLAKENYQFL ENSTTRP00000002241/1-730 EENSDKHVTV TEAEGVADPQ AGVICKLQER DDIGRIELVQ KLARENCQFL ENSBTAP00000033741/1-819 EENSDKHVTV TEAEAAADPQ AGMMCKLQER DDIGRIELVQ KLARESCQFL 251 300 bmy_19543T0/1-627 ---------- -----EDDSV ---------- ---------- -------GSL BACU010527/1-581 ---------- -----EDDSV ---------- ---------- -------GSL ENSP00000343656/1-730 QTDKKEQEKS EH---QDDEV TTVQVKEQDQ SVLVLKKVQC CGPAPTAGSA ENSTTRP00000002241/1-730 QTDKKEQEKS EH---QDDEV TTVQVKEQDR DVLVLKKVQS CGPAPQAGSL ENSBTAP00000033741/1-819 QTDKKEQEKS EHQLKQDDEV TTVEVKEQDQ NVLVLKKVQS CGPAPQAGSA 301 350 bmy_19543T0/1-627 LSD-RYVVVS GTPEKILEHL LNDLHLEEVQ DKETEILCVI SPVDGFKGLA BACU010527/1-581 LSD-RYVVVS GTPEKILEHL LNDLHLEEVQ DKET------ ---------- ENSP00000343656/1-730 ESHWRYVVVS GTPEKILEHL LNDLHLEEVQ DKET------ ---------- ENSTTRP00000002241/1-730 ESDWRYVVVS GTPEKILEHL LNDLHLEEVQ DKET------ ---------- ENSBTAP00000033741/1-819 ESDWRYVVVS GTPEKILEHL LNDLHLEEVQ DKET------ ---------- 351 400 bmy_19543T0/1-627 KQLPLLSPIC SPCVCFPFFA ETLLDDFLLT YTVFMTTDDL CQALLRQYPS BACU010527/1-581 ---------- ---------V QFDLNLKALQ SHFHFTTDDF CRKIL----- ENSP00000343656/1-730 ---------- ---------- ETLLDDFLLT YTVFMTTDDL CQALLRHYSA ENSTTRP00000002241/1-730 ---------- ---------- ETLLDDFLLT YTVFMTTDDL CQALL--YSA ENSBTAP00000033741/1-819 ---------- ---------- ETLLDDFLLT YTVFMTTDDL CQALLRIYSA 401 450 bmy_19543T0/1-627 LTSGCCKYQG KEENSDVPCR KRKVLHLVSQ WIALYKDWLH EDEHSKMFLK BACU010527/1-581 ------KYQG KEENSDVPCR KRKVLHLVSQ WIALYKDWLH EDEHSKMFLK ENSP00000343656/1-730 K-----KYQG KEENSDVPRR KRKVLHLVSQ WIALYKDWLP EDEHSKMFLK ENSTTRP00000002241/1-730 K-----KYQG KEENSDVPCR KRKVLHLVSQ WIALYKDWLH EDEHSKMFLK ENSBTAP00000033741/1-819 K-----KYQG KEENSDVPCR KRKVLHLVSQ WIALYKDWLH EDEHSKMFLK 451 500 bmy_19543T0/1-627 TIYRNVLDDV YEYPILEKEL KEFQKILGMH RRHTVDEYSP QRKNKALFHQ BACU010527/1-581 TIYRNVLDDV YEYPILEKEL KEFQKILGMH RRHTVDEYSP QRKNKALFHQ ENSP00000343656/1-730 TIYRNVLDDV YEYPILEKEL KEFQKILGMH RRHTVDEYSP QKKNKALFHQ ENSTTRP00000002241/1-730 TIYRNVLDDV YEYPILEKEL KEFQKILGMH RRHTVDEYSP QRKNKALFHQ ENSBTAP00000033741/1-819 TIYRNVLDDV YEYPILEKEL KEFQKILGMH RRHTVDEYSP QRKNKALFHQ 501 550 bmy_19543T0/1-627 FSLKENWLQH RGTVTETEEI LSPHAVFCHV YITEHSYVSV KAKVSSTAHE BACU010527/1-581 FSLKENWLQH RGTVTETEEI ------FCHV YITEHSYVSV KAKVSSTAHE ENSP00000343656/1-730 FSLKENWLQH RGTVTETEEI ------FCHV YITEHSYVSV KAKVSSIAQE ENSTTRP00000002241/1-730 FSLKENWLQH RGTVTETEEI ------FCHV YITEHSYVSV KAKVSSTAQE ENSBTAP00000033741/1-819 FSLKENWLQH RGTVTESEEI ------FCHV YITEHSYVSV KATVSSTAQE 551 600 bmy_19543T0/1-627 ILRVVAEKIQ HAEEDLALVA VTFSG--EKH ELQPNDLAIS KSLEASGRIY BACU010527/1-581 ILRVVAEKIQ HAEEDLALVA VTFSG--EKH ELQPNDLAIS KSLEASGRIY ENSP00000343656/1-730 ILKVVAEKIQ YAEEDLALVA ITFSG--EKH ELQPNDLVIS KSLEASGRIY ENSTTRP00000002241/1-730 ILRVVAEKIQ HAEEDLALVA VTFSGDKEKH ELQPNDLVIS KSLEASGRIY ENSBTAP00000033741/1-819 ILRVVAEKIQ HAEDDLALVA VTFSGDKEKH ELQPNNLAIS KSLDASGRIY 601 650 bmy_19543T0/1-627 VYRKDLADTL NPFAENEESQ QRSIRILGMN TWDIALELMN FDWSLFNSIH BACU010527/1-581 VYRKDLADTL NPFAENEESQ QRSIRILGMN TWDIALELMN FDWSLFNSIH ENSP00000343656/1-730 VYRKDLADTL NPFAENEESQ QRSMRILGMN TWDLALELMN FDWSLFNSIH ENSTTRP00000002241/1-730 VYRKDLTDTL NPFAENEESQ QRSIRILGMN TWDIALELMN FDWSLFNSIH ENSBTAP00000033741/1-819 VYRKDLADTL NPFAENEESQ QRSIRILGMN TWDLALELMN FDWSLFSSIH 651 700 bmy_19543T0/1-627 EQELIYFTFS RQGSGEHTVN LSLLLQRCNE VQLWVATEIL LCSQLGKRVQ BACU010527/1-581 EQELIYFTFS RQGSGEHTVN LSLLLQRCNE VQLWVATEIL LCSQLGKRVQ ENSP00000343656/1-730 EQELIYFTFS RQGSGEHTAN LSLLLQRCNE VQLWVATEIL LCSQLGKRVQ ENSTTRP00000002241/1-730 EQELIYFTFS RQGSGDHTVN LSLLLQRCNE VQLWVATEIL LCSQLGKRVQ ENSBTAP00000033741/1-819 EQELIYFTFS RQGSGEHTAN LSLLLQRCNE VQLWVATEIL LCSPLGKRVQ 701 750 bmy_19543T0/1-627 LVKKFIKIAA HCKAQRNLNS FFAIVMGLNT ASVSRLSQTW EKIPGKFKKL BACU010527/1-581 LVKKFIKIAA HCKAQRNLNS FFAIVMGLNT ASVSRLSQTW EKIPGKFKKL ENSP00000343656/1-730 LVKKFIKIAA HCKAQRNLNS FFAIVMGLNT ASVSRLSQTW EKIPGKFKKL ENSTTRP00000002241/1-730 LVKKFIKIAA HCKAQRNLNS FFAIVMGLNT ASVSRLSQTW EKIPGKFKKL ENSBTAP00000033741/1-819 LVKKFIKIAA HCKAQRNLNS FFAIVMGLNT ASVSRLSQTW EKIPGKFKKL 751 800 bmy_19543T0/1-627 FSELESLTDP SLNHKAYRDA FKKMKPPKIP FMPLLLKDVT FIHEGNKTFL BACU010527/1-581 FSELESLTDP SLNHKAYRDA FKKMKPPKIP FMPLLLKDVT FIHEGNKTFL ENSP00000343656/1-730 FSELESLTDP SLNHKAYRDA FKKMKPPKIP FMPLLLKDVT FIHEGNKTFL ENSTTRP00000002241/1-730 FSELESLTDP SLNHKAYRDA FKKMKPPKIP FMPLLLKDVT FIHEGNKTFL ENSBTAP00000033741/1-819 FSELESLTDP SLNHKAYRDA FKKMKPPKIP FMPLLLKDVT FIHEGNKTFL 801 850 bmy_19543T0/1-627 DNLVNFEKLH MIADTVRTLR HCRTNQF--- ---GGDISPK EHPELKSYIH BACU010527/1-581 DNLVNFEKLH MIADTVRTLR HCRTNQFGES LKLGGDISPK EHPELKSYVH ENSP00000343656/1-730 DNLVNFEKLH MIADTVRTLR HCRTNQF--- ----GDLSPK EHQELKSYVN ENSTTRP00000002241/1-730 DNLVNFEKLH MIADTVRTLR HCRTHQF--- ----GDISPK EHPELKSYVH ENSBTAP00000033741/1-819 DNLVNFEKLH MIADTVRTLR HCRTNQF--- ---GGDISPK EHPELKSYVH 851 900 bmy_19543T0/1-627 HLCVIDSQQA LFALSHRIEP RV BACU010527/1-581 HLCVIDSQQA LFALSHRIEP RV ENSP00000343656/1-730 HLYVIDSQQA LFELSHRIEP RV ENSTTRP00000002241/1-730 HLCVIDSQQA LFALSHRIEP RV ENSBTAP00000033741/1-819 HLYVIDSQQA LFELSHRIEP RV