KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:43:39 2014  Check: 00 ..

 Name: ENSTTRP00000009359/1-182  Len:    182  Check:  3933  Weight:  1.00
 Name: ENSP00000391490/1-175     Len:    182  Check:  1421  Weight:  1.00
 Name: ENSBTAP00000033750/1-175  Len:    182  Check:  1409  Weight:  1.00
 Name: bmy_13397T0/1-100         Len:    182  Check:  8218  Weight:  1.00
 Name: BACU000469/1-175          Len:    182  Check:  952  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000009359/1-182  MEKISVSAFL LLVALSYTLA KETTVKPGAK KDTKDSQPKL PQTLSRGWGD 
ENSP00000391490/1-175     MEKIPVSAFL LLVALSYTLA RDTTVKPGAK KDTKDSRPKL PQTLSRGWGD 
ENSBTAP00000033750/1-175  MEKIPVSAFL LLVALSYTLA KDTTVKPGAK KDTKDSQLKL PQTLSRGWGD 
bmy_13397T0/1-100         MKKL------ ------YT-- ---------- ------NPR- ---------- 
BACU000469/1-175          MEKISVSAFL LLVALSYTLA KDTTVKPGAK KDTKDSQPKL PQTLSRGWGD 


                          51                                                 100
ENSTTRP00000009359/1-182  QLIWTQTYEE ALHKSRTSNK PLMIIHHLDE CPHSQALKKA FAENKEIQKL 
ENSP00000391490/1-175     QLIWTQTYEE ALYKSKTSNK PLMIIHHLDE CPHSQALKKV FAENKEIQKL 
ENSBTAP00000033750/1-175  QLIWTQTYEE ALYKSKTSNK PLMIIHHLDE CPHSQALKKA FAENKEIQRL 
bmy_13397T0/1-100         ---------- ---------- ---------- ----QALKKT FAENKEIQKL 
BACU000469/1-175          QLIWTQTYEE ALFKSKTSNK PLMIIHHLDE CPHSQALKKT FAENKEIQKL 


                          101                                                150
ENSTTRP00000009359/1-182  AEQFVLLNLV YETTDKHLSP DGQYVPRIMF VDPSLTVRAD ITGRYSNRLY 
ENSP00000391490/1-175     AEQFVLLNLV YETTDKHLSP DGQYVPRIMF VDPSLTVRAD ITGRYSNRLY 
ENSBTAP00000033750/1-175  AEQFVLLNLV YETTDKHLSP DGQYVPRILF VDPSLTVRAD ITGRYSNRLY 
bmy_13397T0/1-100         AEQFVLLNLV YETTDKHLSP DGQYVPRIMF IDPSLTVRAD ITGRYSNRLY 
BACU000469/1-175          AEQFVLLNLV YETTDKHLSP DGQYVPRIMF IDPSLTVRAD ITGRYSNRLY 


                          151                                                200
ENSTTRP00000009359/1-182  AYEPSDMALC KCYLFEHLFH CCTGRRAHMG RG 
ENSP00000391490/1-175     AYEPADTAL- ---LLDNMKK ALKLLKTEL- -- 
ENSBTAP00000033750/1-175  AYEPSDTAL- ---LLDNMKK ALKLLKTEL- -- 
bmy_13397T0/1-100         AYEPSDMAL- ---LLDNMRK ALKFLKTEL- -- 
BACU000469/1-175          AYEPSDMAL- ---LLDNMKK ALKFLKTEL- --