KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:39 2014 Check: 00 .. Name: ENSTTRP00000009316/1-423 Len: 466 Check: 8581 Weight: 1.00 Name: BACU007258/1-459 Len: 466 Check: 5106 Weight: 1.00 Name: bmy_18550T0/1-463 Len: 466 Check: 8883 Weight: 1.00 Name: ENSP00000290583/1-465 Len: 466 Check: 9594 Weight: 1.00 Name: ENSBTAP00000033756/1-461 Len: 466 Check: 7279 Weight: 1.00 // 1 50 ENSTTRP00000009316/1-423 VEESAAGEQS SGTQIPRHLE EKDLKPIFEQ FGRIFELTVI KDKYTGLHKG BACU007258/1-459 MKEPDAIKLF VG-QIPRHLE EKDLKPIFEQ FGRIFELTVI KDKYTGLHKG bmy_18550T0/1-463 MKEPDAIKLF VG-QIPRHLE EKDLKPIFEQ FGRIFELTVI KDKYTGLHKG ENSP00000290583/1-465 MKEPDAIKLF VG-QIPRHLE EKDLKPIFEQ FGRIFELTVI KDKYTGLHKG ENSBTAP00000033756/1-461 MKEPDAIKLF VG-QIPRHLE EKDLKPIFEQ FGRIFELTVI KDKYTGLHKG 51 100 ENSTTRP00000009316/1-423 CAFLTYCARD SALKAQSALH EQKTLPGXXX XXXXXXXXSE SRG-DRKLFV BACU007258/1-459 CAFLTYCARD SALKAQSALH EQKTLPGMNR PIQVKPADSE SRGEDRKLFV bmy_18550T0/1-463 CAFLTYCARD SALKAQSALH EQKTLPGMNR PIQVKPADSE SRGEDRKLFV ENSP00000290583/1-465 CAFLTYCARD SALKAQSALH EQKTLPGMNR PIQVKPADSE SRGEDRKLFV ENSBTAP00000033756/1-461 CAFLTYCARD SALKAQSALH EQKTLPGMNR PIQVKPADSE SRGEDRKLFV 101 150 ENSTTRP00000009316/1-423 GMLGKQQTDE DVRKMFEPFG TIDECTVLRG PDGTSKGCAF VKFQTHAEAQ BACU007258/1-459 GMLGKQQTDE DVRKMFEPFG TIDECTVLRG PDGTSKGCAF VKFQTHAEAQ bmy_18550T0/1-463 GMLGKQQTDE DVRKMFEPFG TIDECTVLRG PDGTSKGCAF VKFQTHAEAQ ENSP00000290583/1-465 GMLGKQQTDE DVRKMFEPFG TIDECTVLRG PDGTSKGCAF VKFQTHAEAQ ENSBTAP00000033756/1-461 GMLGKQQTDE DVRKMFEPFG TIDECTVLRG PDGTSKGCAF VKFQTHAEAQ 151 200 ENSTTRP00000009316/1-423 AAINTLHSSR TLPGASSSLV VKFADTEKER GLRRMQQVAT QLGMFSPIAL BACU007258/1-459 AAINTLHSSR TLPGASSSLV VKFADTEKER GLRRMQQVAT QLGMFSPIAL bmy_18550T0/1-463 AAINTLHSSR TLPGASSSLV VKFADTEKER GLRRMQQVAT QLGMFSPIAL ENSP00000290583/1-465 AAINTLHSSR TLPGASSSLV VKFADTEKER GLRRMQQVAT QLGMFSPIAL ENSBTAP00000033756/1-461 AAINTLHSSR TLPGASSSLV VKFADTEKER GLRRMQQVAT QLGMFSPIAL 201 250 ENSTTRP00000009316/1-423 QFGAYSAYTQ ALMQQQAALV AAHSAYLSPM ATMAAVQMQH MAAINANGLI BACU007258/1-459 QFGAYSAYTQ ALMQQQAALV AAHSAYLSPM ATMAAVQMQH MAAINANGLI bmy_18550T0/1-463 QFGAYSAYTQ ALMQQQAALV AAHSAYLSPM ATMAAVQMQH MAAINANGLI ENSP00000290583/1-465 QFGAYSAYTQ ALMQQQAALV AAHSAYLSPM ATMAAVQMQH MAAINANGLI ENSBTAP00000033756/1-461 QFGAYSAYTQ ALMQQQAALV AAHSAYLSPM ATMAAVQMQH MAAINANGLI 251 300 ENSTTRP00000009316/1-423 ATPITPSSGT STPPAIAATP VSAIPAALGV NGYSPVPTQP TGQPAPDALY BACU007258/1-459 ATPITPSSGT STPPAIAATP VSAIPAALGV NGYSPVPTQP TGQPAPDALY bmy_18550T0/1-463 ATPITPSSGT STPPAIAATP VSAIPAALGV NGYSPVPTQP TGQPAPDALY ENSP00000290583/1-465 ATPITPSSGT STPPAIAATP VSAIPAALGV NGYSPVPTQP TGQPAPDALY ENSBTAP00000033756/1-461 ATPITPSSGT STPPAIAATP VSAIPAALGV NGYSPVPTQP TGQPAPDALY 301 350 ENSTTRP00000009316/1-423 PNGVHPYPAQ SPAAPVDPLQ QAYAGMQHYT AAYPAAYSLV APAFPQPPAL BACU007258/1-459 PNGVHPYPAQ SPAAPGPPLQ QAYAGMQHYT AAYPAAYSLV APAFPQPPAL bmy_18550T0/1-463 PNGVHPYPAQ SPAAPVDPLQ QAYAGMQHYT AAYPAAYSLV APAFPQPPAL ENSP00000290583/1-465 PNGVHPYPAQ SPAAPVDPLQ QAYAGMQHYT AAYPAAYSLV APAFPQPPAL ENSBTAP00000033756/1-461 PNGVHPYPAQ SPAAPVDPLQ QAYAGMQHYT -AYPAAYSLV APAFPQPPAL 351 400 ENSTTRP00000009316/1-423 VAQQPPPPPQ QQQQQQQQQQ QQQQREGPDG CNIFIYHLPQ EFTDSEILQM BACU007258/1-459 VAQQPPPPP- -----QQQQQ QQQQREGPDG CNIFIYHLPQ EFTDSEILQM bmy_18550T0/1-463 VAQQPPPPP- -QQQQQQQQQ QQQQREGPDG CNIFIYHLPQ EFTDSEILQM ENSP00000290583/1-465 VAQQPPPPPQ QQQQQQQQQQ QQQQREGPDG CNIFIYHLPQ EFTDSEILQM ENSBTAP00000033756/1-461 VAQQPPPPP- --QQQQQQQQ QQQQREGPDG CNIFIYHLPQ EFTDSEILQM 401 450 ENSTTRP00000009316/1-423 FVPFGHVISA KVFVDRATNQ SKCF------ ---------- ---------- BACU007258/1-459 FVPFGHVISA KVFVDRATNQ SKCFGFVSFD NPASAQAAIQ AMNGFQIGMK bmy_18550T0/1-463 FVPFGHVISA KVFVDRATNQ SKCFGFVSFD NPASAQAAIQ AMNGFQIGMK ENSP00000290583/1-465 FVPFGHVISA KVFVDRATNQ SKCFGFVSFD NPASAQAAIQ AMNGFQIGMK ENSBTAP00000033756/1-461 FVPFGHVISA KVFVDRATNQ SKCFGFVSFD NPASAQAAIQ AMNGFQIGMK 451 500 ENSTTRP00000009316/1-423 ---------- ------ BACU007258/1-459 RLKVQLKRPK DANRPY bmy_18550T0/1-463 RLKVQLKRPK DANRPY ENSP00000290583/1-465 RLKVQLKRPK DANRPY ENSBTAP00000033756/1-461 RLKVQLKRPK DANRPY