KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:39 2014 Check: 00 .. Name: BACU015292/1-210 Len: 337 Check: 819 Weight: 1.00 Name: bmy_05078T0/1-337 Len: 337 Check: 2604 Weight: 1.00 Name: ENSP00000370003/1-219 Len: 337 Check: 4797 Weight: 1.00 Name: ENSTTRP00000004585/1-185 Len: 337 Check: 7316 Weight: 1.00 Name: ENSBTAP00000033770/1-219 Len: 337 Check: 4944 Weight: 1.00 // 1 50 BACU015292/1-210 ---------- ---------- ---------- ---------- ---------- bmy_05078T0/1-337 RTRGGTAQAQ KRGRGTRLVV LLPKNQRRSC CGRSSSRRPT MSSHLVEQPP ENSP00000370003/1-219 ---------- ---------- ---------- ---------- MSSHLVEPPP ENSTTRP00000004585/1-185 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033770/1-219 ---------- ---------- ---------- ---------- MSSHLVEQPP 51 100 BACU015292/1-210 ---------- ---------- ---------- MNSSNGNDNG NGKNGGLEHV bmy_05078T0/1-337 PPHNNNNNCE EGEQSLPPPA GLNSSWVELP MNSSNGNDNG NGKNGGLEHV ENSP00000370003/1-219 PLHNNNNNCE ENEQSLPPPA GLNSSWVELP MNSSNGNDNG NGKNGGLEHV ENSTTRP00000004585/1-185 ---------- ---------- ----SWVELP MNSSNGNDNG NGKNGGLEHV ENSBTAP00000033770/1-219 PPHNNNNNCE EGEQSLPPPA GLNSSWVELP MNSSNGNDNG NGKNGGLEHV 101 150 BACU015292/1-210 PSSSSIHNGD MEKILLDAQH ESGQSSSRGS SHCDSPSPQE DGQIMFDVEM bmy_05078T0/1-337 PSSSSIHNGD MEKILLDAQH ESGQSSSRGS SHCDSPSPQE DGQIMFDVEM ENSP00000370003/1-219 PSSSSIHNGD MEKILLDAQH ESGQSSSRGS SHCDSPSPQE DGQIMFDVEM ENSTTRP00000004585/1-185 PSSSSIHNGD MEKILLDAQH ESGQSSSRGS SHCDSPSPQE DGQIMFDVEM ENSBTAP00000033770/1-219 PSSSSIHNGD MEKILLDAQH ESGQSSSRGS SHCDSPSPQE DGQIMFDVEM 151 200 BACU015292/1-210 HTSRDHSSQS EEEVAEGEKE VDALKKSVDW VSDWSSRPEN IPPKEFHFRH bmy_05078T0/1-337 HTSRDHSSQS EEEVAEGEKE VDALKKSVDW VSDWSSRPEN IPPKEFHFRH ENSP00000370003/1-219 HTSRDHSSQS EEEVVEGEKE VEALKKSADW VSDWSSRPEN IPPKEFHFRH ENSTTRP00000004585/1-185 HTSRDHSSQS EEEVAEGEKE VDALKKSVDW VSDWSSRPEN IPPKEFHFRH ENSBTAP00000033770/1-219 HTSKDHSSQS EEEVAEGEKE VDALKKSVDW VSDWSSRPEN IPPKEFHFRH 201 250 BACU015292/1-210 PKRSVSLSMR KSGAMKKGGI FSAEFLKVFI PSLFLSHVLA LGLGASGVNL bmy_05078T0/1-337 PKRSVSLSMR KSGAMKKGGI FSAEFLKVFI PSLFLSHVLA LGLGASGVNL ENSP00000370003/1-219 PKRSVSLSMR KSGAMKKGGI FSAEFLKVFI PSLFLSHVLA LGLGI----- ENSTTRP00000004585/1-185 PKRSVSLSMR KSGAMKKGGI FSAEFLKVFI PSLFLSHVLA LGLGI----- ENSBTAP00000033770/1-219 PKRSVSLSMR KSGAMKKGGI FSAEFLKVFI PSLFLSHVLA LGLGI----- 251 300 BACU015292/1-210 EELLKSIHYW YIGFPRSLEV EHVYETF--- ------RKLK WCKAKKQLP- bmy_05078T0/1-337 KELLKSIHYW YIGFPRSLKV QHVYETFPST LENDSARLLP APTEGKEEPL ENSP00000370003/1-219 ---------- YIG------- ---------- ------KRLS TPSASTY--- ENSTTRP00000004585/1-185 ---------- YIG------- ---------- ------KRLS TPSASTY--- ENSBTAP00000033770/1-219 ---------- YIG------- ---------- ------KRLS TPSASTY--- 301 350 BACU015292/1-210 ---------- ---------- ---------- ------- bmy_05078T0/1-337 GKRVTCEVVY CHSSLFELET IVSMTQPTPY FYISKFQ ENSP00000370003/1-219 ---------- ---------- ---------- ------- ENSTTRP00000004585/1-185 ---------- ---------- ---------- ------- ENSBTAP00000033770/1-219 ---------- ---------- ---------- -------