KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:43:43 2014 Check: 00 ..
Name: ENSP00000405987/1-860 Len: 873 Check: 9274 Weight: 1.00
Name: ENSBTAP00000033782/1-863 Len: 873 Check: 5135 Weight: 1.00
Name: bmy_09336T0/1-869 Len: 873 Check: 7087 Weight: 1.00
Name: BACU016862/1-448 Len: 873 Check: 2170 Weight: 1.00
Name: ENSTTRP00000009796/1-118 Len: 873 Check: 3354 Weight: 1.00
//
1 50
ENSP00000405987/1-860 MSEKEGMSEV LEDTISQFRK ESRSQSMKEP GFIKETSNLI NEASDYLEGK
ENSBTAP00000033782/1-863 MSEKKRTSEE LEDIISRYRK ESRSRSVEES GLTKETSNLL KEDSD---ET
bmy_09336T0/1-869 MSEKKGTSEE LEDLTSQFRK ESRSRLVEES GVIKETSNSL KEASD---GT
BACU016862/1-448 MSEKKGTSEE LEDLTSQFRK ESRSRLVEES GVIKETSNSL KEASD---GT
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000405987/1-860 SSNQIYETHP RQNTL----- ESTSSSGRKS KRNEEQKKNL QFSET-----
ENSBTAP00000033782/1-863 SSNQIYETHP SKNTL----- --ASSSGSKS KKNEEQRKSL QFSETITTYD
bmy_09336T0/1-869 TSNQICKARP RKNTLGICDD TSTSSSGSKS KRNEEQRKTL QFSETIATYD
BACU016862/1-448 TSNQICKARP RKNTLGICDD TSTSSSGSKS KRNEEQRKTL QFSETIATYD
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
101 150
ENSP00000405987/1-860 --STRTGTSQ SLS-SLTGRT AEYQALVNFL SHETVGEVSP QVSEENQKQL
ENSBTAP00000033782/1-863 SLQSKTGISQ NSSLSETEMR AEYQAFVDSL SHETLGKISP QLSEENQKGS
bmy_09336T0/1-869 SLQSKSEISQ SSSLSVTKMS AEYQAFVDSL THETLEKISP QLSEENQKGL
BACU016862/1-448 SLQSKSEISQ SSSLSVTKMS AEYQAFVDSL THETLEKISP QLSEENQKGL
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
151 200
ENSP00000405987/1-860 GLGADNFTVN LEAKGLQEFP KDILKIKYVK YLYLDKNQIK TFQGADSGDL
ENSBTAP00000033782/1-863 GLPSDNFTIN LKAKGLQEFP KDILKVKYVK YLYLDENEIK SFKGADSRDM
bmy_09336T0/1-869 GLGSDNFTVN LKAKGLQEFP KDILKIKYVK YLYLDENEIK SFKGADSSDL
BACU016862/1-448 GLGSDNFTVN LKAKGLQEFP KDILKSKYVK YLYLDENEIK SFKGADSSDL
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
201 250
ENSP00000405987/1-860 LGLEILSLQE NGLSSLPSEI QLLHNLRILN VSHNHISHIP KEISQLGNIR
ENSBTAP00000033782/1-863 LGLEILSIQK NGLSTLPSEI QLLHNLKLLN VSYNQISHIP KEISQLGNIK
bmy_09336T0/1-869 LGLEILSMQE NGLSSLPSEI QLLHNLKLLN VSHNQISHIP QEISHLGTIR
BACU016862/1-448 LGLEILSMQE NGLSSLPSEI QLLHNLKLLN ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
251 300
ENSP00000405987/1-860 QLFFYNNYIE NFPSDLECLG NLEILSLGKN KLRHIPDTLP SLKTLRVLNL
ENSBTAP00000033782/1-863 ELFLNNNCIE DFPSGLESLK NLEILNLAKN KLRHIPDALS SLKNLRALNL
bmy_09336T0/1-869 QLFLNNNCIE DFPSGLESLG NLEILNLAKN KLRHIPDTLS SLKNLRALNL
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
301 350
ENSP00000405987/1-860 EYNQLTTFPK ALCFLPKLIS LDLTGNLISS LPKEIRELKN LETLLMDHNK
ENSBTAP00000033782/1-863 EYNRLTIFPK ALCFLPKLIS LNLTGNLINS LPKEIKELKN LEKLLLDHNK
bmy_09336T0/1-869 EYNQLTVFPK ALCFLPKLIL LNLSGNLINS LPKEIKELKN LEILLLDHNK
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
351 400
ENSP00000405987/1-860 LTFLAVEIFQ LLKIKELQLA DNKLEVISHK IENFRELRIL ILDKNLLKNI
ENSBTAP00000033782/1-863 LTFLAVEIFL LLKMKELQLT DNKLEVISNK IENFKELRIL ILDKNLLKDM
bmy_09336T0/1-869 LTFLAVEIFQ LLKMKELQLT DNKLEVISHK IENFRELRIL ILDKNLLKDI
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
401 450
ENSP00000405987/1-860 PEKISCCAML ECLSLSDNKL TELPKYIHKL NNLRKLHVNR NNMVKITDCI
ENSBTAP00000033782/1-863 PENISHCAVL ECLSLSDNKL TELPKNIHKL KNLRKLHINR NYLVKIPEYI
bmy_09336T0/1-869 PEKISHCVML ECLSLSDNKL TELPKNIHKL KNLRKLHINR NNIVKIPEYI
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
451 500
ENSP00000405987/1-860 SHLNNICSLE FSGNIITDVP IEIKNCQKII KIELSYNKIM YFPLGLCALD
ENSBTAP00000033782/1-863 SHLNNMFSLE FSGNFITDFP IEIKSCKNIA KVELSYNKIM YFPLGLCALD
bmy_09336T0/1-869 SHLNNMFSLE FSGNLIADFP IEIKNCRKIT KVELSYNRIM YFPLGLCALD
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
501 550
ENSP00000405987/1-860 SLYYLSVNGN YISEIPVDIS FSKQLLHLEL SENKLLIFSE HFCSLINLKY
ENSBTAP00000033782/1-863 SLHYLSLNGN YISEIPVDIS FNKQLLHLEF NENKLLLFSE HLCSLINLEY
bmy_09336T0/1-869 SLYYLGFNGN YISEIPVDIS FSKQLLHLEL NENKLLIFSE HLCSLINLEY
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
551 600
ENSP00000405987/1-860 LDLGKNQIKK IPASISNMIS LHVLILCCNK FETFPRELCT LENLQVLDLS
ENSBTAP00000033782/1-863 LDLGKNKIRK IPPSISNMVS LHVLILCYNK LETFPTEVCT LDNLRVLDLS
bmy_09336T0/1-869 LDLGKNKIRK IQPSISNMVS LRVLILCCNK LETFPIEVCT LENLQVLDFS
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
601 650
ENSP00000405987/1-860 ENQLQKISSD ICNLKGIQKL NFSSNQFIHF PIELCQLQSL EQLNISQIKG
ENSBTAP00000033782/1-863 ENQIQTIPSE ICNLKGIQKL NISNNQFIYF PVELCHLQSL EELNISQING
bmy_09336T0/1-869 ENQIQTIPSE ICNLKGIQKL NISSNQFIYF PIELCQLQSL EELNISQING
BACU016862/1-448 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
651 700
ENSP00000405987/1-860 RKLTRLPGEL SNMTQLKELD ISNNAIREIP RNIGELRNLV SLHAYNNQIS
ENSBTAP00000033782/1-863 KKLTRLPEEL SNMTKLKGLD ISNNAIREMP TNIGELRSLV SLNADNNQIR
bmy_09336T0/1-869 RKLTRLPEEL SNMTQLKGLD ISNNAIREMP RNIGELRGLV SLNAYNNQIR
BACU016862/1-448 --LTRLPEEL SNMTQLKGLD VSNNAIREMP RNIGELRGLV SLNAYNNQIR
ENSTTRP00000009796/1-118 ---------- --MTQLKGLD ISNNEIREMP RNIGELRGLV SLNAYNNQIR
701 750
ENSP00000405987/1-860 YLPPSLLSLN DLQQLNLSGN NLTALPSAIY NIFSLKEINF DDNPLLRPPV
ENSBTAP00000033782/1-863 YLPSSFLSLN ALQQLNLSGN NLSVLPSGIY NLFSLKEINF DDNPLLRPPM
bmy_09336T0/1-869 YLPPSFLSLN ALQQLNLSGN NLTALPSGIY NLFSLKEINF DDNPLLRPPM
BACU016862/1-448 YLPPSFLSLN ALQQLNLSGN NLTALPSGIY NLFSLKEINF DDNPLLRPPM
ENSTTRP00000009796/1-118 YLPPSFLSLN ALQQLNLSGN NLTALPSGIY KLFSLKEINF DDNPLLRPPV
751 800
ENSP00000405987/1-860 EICKGKQLYT IARYLQRADE RDEKILEKIF KIVANNITET NFEFLCQKLN
ENSBTAP00000033782/1-863 EICKGKQLYT IARYLQRADE RDEKILAKIF KIVAKNITET HFQFLCQKLN
bmy_09336T0/1-869 EICKGKQLYT IAHYLQRADE RDEKILAKIF KIIANNITET NFQFLCQKLN
BACU016862/1-448 EICKGKQLYT VARYLQRADE RDEKILAKIF KIIANNITET NFQFLCQKLN
ENSTTRP00000009796/1-118 EICKEKQLCT IACYLQRADE RDGR------ ---------- ----------
801 850
ENSP00000405987/1-860 LANSETDMPT KSTVSLSERA HQALVIWKTQ SNKLSLTAAA LRDQLIRALT
ENSBTAP00000033782/1-863 LTISESDKSA LSTVSLSERV HQVLDKWKME KNNLSVTTAA LRDQLTRALT
bmy_09336T0/1-869 LAITETDKST -TTVSLSERV HRTLDKWKME NNNLSVTTAA LRDQLTRALT
BACU016862/1-448 LAITETDKST MSTVSLSERV HRTLDKWKME NNNLSVTTAA LRDQLTRALT
ENSTTRP00000009796/1-118 ---------- ---------- ---------- ---------- ----------
851 900
ENSP00000405987/1-860 MIGAYEIMDK ITALNLFTRA IKF
ENSBTAP00000033782/1-863 MIGAYEIMDK ITALKLFSCA IKF
bmy_09336T0/1-869 MIGAYEIMDK ITALKLFTCA IKF
BACU016862/1-448 MIGAYEIMDK ITALKLFTCA IKF
ENSTTRP00000009796/1-118 ---------- ---LRIYIQ- ---