KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:45 2014 Check: 00 .. Name: ENSP00000271715/1-1410 Len: 1413 Check: 2093 Weight: 1.00 Name: ENSBTAP00000033789/1-1287 Len: 1413 Check: 2896 Weight: 1.00 Name: ENSTTRP00000010857/1-1410 Len: 1413 Check: 6108 Weight: 1.00 Name: bmy_16036T0/1-1401 Len: 1413 Check: 4126 Weight: 1.00 Name: BACU007254/1-1342 Len: 1413 Check: 1773 Weight: 1.00 // 1 50 ENSP00000271715/1-1410 MADTDLFMEC EEEELEPWQK ISDVIEDSVV EDYNSVDKTT TVSVSQQPVS ENSBTAP00000033789/1-1287 MADTDLFMEC EEEELEPWQK ISDVIEDSVV EDYNSVDKTT T--------- ENSTTRP00000010857/1-1410 MADTDLFMEC EEEELEPWQK ISDVIEDSVV EDYNSVDKTT TVSVSQQPVS bmy_16036T0/1-1401 MADTDLFMEC EEEELEPWQK ISDVIEDSVV EDYNSVDKTT TVSVSQQPVS BACU007254/1-1342 -------MEC EEEELEPWQK ISDVIEDSVV EDYNSVDKTT T--------- 51 100 ENSP00000271715/1-1410 APVPIAAHAS VAGHLSTSTT VSSSGAQNSD STKKTLVTLI ANNNAGNPLV ENSBTAP00000033789/1-1287 ---------- ---------- ---------- ---------- ----AGNSLV ENSTTRP00000010857/1-1410 APVPIAAHAS VAGHLSTSTT VSSSGAQNSD STKKTLVTLI ANNNAGNSLV bmy_16036T0/1-1401 APVPIVAHAS VAGHLSTSTT VSSSGAXNSD STKKTLVTLI ANNNAGNSLV BACU007254/1-1342 ---------- ---------- ---------- ---------- ----AGNSLV 101 150 ENSP00000271715/1-1410 QQGGQPLILT QNPAPGLGTM VTQPVLRPVQ VMQNANHVTS SPVASQPIFI ENSBTAP00000033789/1-1287 QQGGQPLILT QNPAPGLGTM VTQPVLRPVQ VMQNANHVTS SPVASQPIFI ENSTTRP00000010857/1-1410 QQGGQPLILT QNPTSGLGTM VTQPVLRPVQ VMQNANHVTS SPVASQPIFI bmy_16036T0/1-1401 QQGGQPLILT QNPTPGLGTM VTQPVLRPVQ VMQNANHVTS SPVASQPIFI BACU007254/1-1342 QQGGQPLILT QNPTPGLGTM VTQPVLRPVQ VMQNANHVTS SPVASQPIFI 151 200 ENSP00000271715/1-1410 TTQGFPVRNV RPVQNAMNQV GIVLNVQQGQ TVRPITLVPA PGTQFVKPTV ENSBTAP00000033789/1-1287 TTQGFPVRNV RPVQNAMNQV GIVLNVQQGQ TVRPITLVPA PGTQFVKPTV ENSTTRP00000010857/1-1410 TTQGFPVRNV RPVQNAMNQV GIVLNVQQGQ TVRPITLVPA PGTQFVKPTV bmy_16036T0/1-1401 TTQGFPVRNV RPVQNAMNQV GIVLNVQQGQ TVRPITLVPA PGTQFVKPTV BACU007254/1-1342 TTQGFPVRNV RPVQNAMNQV GIVLNVQQGQ TVRPITLVPA PGTQFVKPTV 201 250 ENSP00000271715/1-1410 GVPQVFSQMT PVRPGSTMPV RPTTNTFTTV IPATLTIRST VPQSQSQQTK ENSBTAP00000033789/1-1287 GVPQVFSQMT PVRPGSTMPV RPTTNTFTTV IPATLTIRST VPQSQSQSTK ENSTTRP00000010857/1-1410 GVPQVFSQMT PVRPGSTMPV RPTTNTFTTV IPATLTIRST VPQSQSQQTK bmy_16036T0/1-1401 GVPQVFSQMT PVRPGSTMPV RPTTNTFTTV IPATLTIRST VPQSQSQQTK BACU007254/1-1342 GVPQVFSQMT PVRPGSTMPV RPTTNTFTTV IPATLTIRST VPQSQSQQTK 251 300 ENSP00000271715/1-1410 STPSTSTTPT ATQPTSLGQL AVQSPGQSNQ TTNPKLAPSF PSPPAVSIAS ENSBTAP00000033789/1-1287 STPSTSTTPT ATQPTSLGHL AVQPPGQSSQ TQNPKL---- ---------- ENSTTRP00000010857/1-1410 STPSTSTTPT ATQPTSLGHL AVQPPGQSNQ TQNPKLAPSF PSPPAVSIAS bmy_16036T0/1-1401 STPSTSTTPT ATQPTSLGHL AVQPPGQSNQ --NPKL---- -----VSIAS BACU007254/1-1342 STPSTSTTPT ATQPTSLGHL AVQPPGQSSQ --NPKL---- -----VSIAS 301 350 ENSP00000271715/1-1410 FVTVKRPGVT GENSNEVAKL VNTLNTIPSL GQSPGPVVVS NNSSAHGSQR ENSBTAP00000033789/1-1287 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010857/1-1410 FVTVKRPGVT GENSNEVAKL VNTLNTIPSL GQSPGPMVVS NNSSAHGSQR bmy_16036T0/1-1401 FVTVKRPGVT GENSNEVAKL VNTLNTIPSL GQSPGPMVVS NNSSAHGSQR BACU007254/1-1342 FVTVKRPGVT GENSNEVAKL VNTLNTIPSL GQSPGPMVVS NNSSAHGSQR 351 400 ENSP00000271715/1-1410 TSGPESSMKV TSSIPVFDLQ DGGRKICPRC NAQFRVTEAL RGHMCYCCPE ENSBTAP00000033789/1-1287 ---------V TSPIPVFDLQ DGGRKICPQC NAHFRVTEAL RGHMCYCCPE ENSTTRP00000010857/1-1410 TSGPESSMKV TSSIPVFDLQ DGGRKICPRC NAQFRVTEAL RGHMCYCCPE bmy_16036T0/1-1401 TSGPESSMKV TSSIPVFDLQ DGGRKICPRC NAQFRVTEAL RGHMCYCCPE BACU007254/1-1342 TSGPESSMKV TSSIPVFDLQ DGGRKICPRC NAQFRVTEAL RGHMCYCCPE 401 450 ENSP00000271715/1-1410 MVEYQKKGKS LDSEPSVPSA AKPPSPEKTA PVASTPSSTP IPALSPPTKV ENSBTAP00000033789/1-1287 MVEYQKKGKS LDSEPSVPSA AKPPSPEKTA PVASTPSSTP IPALSPPTKV ENSTTRP00000010857/1-1410 MVEYQKKGKS LDSEPSVPSA AKPPSPEKTT PVASTPSSTP IPALSPPTKV bmy_16036T0/1-1401 MVEYQKKGKS LDSEPSVPSA AKPPSPEKTT PVASTPSSTP IPALSPPTKV BACU007254/1-1342 MVEYQKKGKS LDSEPSVPSA TKPPSPEKTT PVASTPSSTP IPALSPPTKV 451 500 ENSP00000271715/1-1410 PEPNENVGDA VQTKLIMLVD DFYYGRDGGK VAQLTNFPKV ATSFRCPHCT ENSBTAP00000033789/1-1287 PEPNENVGDA VQTKLIMLVD DFYYGRDGGT VAQLTNFPKV ATSFRCPHCT ENSTTRP00000010857/1-1410 PEPNENVXXX XXXKLIMLVD DFYYGRDGGK VAQLTNFPKV ATSFRCPHCT bmy_16036T0/1-1401 PEPNENVGDA VQTKLIMLVD DFYYGRDGGK VAQLTNFPKV ATSFRCPHCT BACU007254/1-1342 PEPNENVGDA VQTKLIMLVD DFYYGRDGGK VAQLTNFPKV ATSFRCPHCT 501 550 ENSP00000271715/1-1410 KRLKNNIRFM NHMKHHVELD QQNGEVDGHT ICQHCYRQFS TPFQLQCHLE ENSBTAP00000033789/1-1287 KRLKNNIRFM NHMKHHVELD QQNGEVDGHT ICQHCYRQFS TPFQLQCHLE ENSTTRP00000010857/1-1410 KRLKNNIRFM NHMKHHVELD QQNGEVDGHT ICQHCYRQFS TPFQLQCHLE bmy_16036T0/1-1401 KRLKNNIRFM NHMKHHVELD QQNGEVDGHT ICQHCYRQFS TPFQLQCHLE BACU007254/1-1342 KRLKNNIRFM NHMKHHVELD QQNGEVDGHT ICQHCYRQFS TPFQLQCHLE 551 600 ENSP00000271715/1-1410 NVHSPYESTT KCKICEWAFE SEPLFLQHMK DTHKPGEMPY VCQVCQYRSS ENSBTAP00000033789/1-1287 NVHSPYESTT KCKICEWAFE SEPLFLQHMK DTHKPGEMPY VCQVCQYRSS ENSTTRP00000010857/1-1410 NVHSPYESTT KCKICEWAFE SEPLFLQHMK DTHKPGEMPY VCQVCQYRSS bmy_16036T0/1-1401 NVHSPYESTT KCKICEWAFE SEPLFLQHMK DTHKPGEMPY VCQVCQYRSS BACU007254/1-1342 NVHSPYESTT KCKICEWAFE SEPLFLQHMK DTHKPGEMPY VCQVCQYRSS 601 650 ENSP00000271715/1-1410 LYSEVDVHFR MIHEDTRHLL CPYCLKVFKN GNAFQQHYMR HQKRNVYHCN ENSBTAP00000033789/1-1287 LYSEVDVHFR MIHEDTRHLL CPYCLKVFKN GSAFQQHYMR HQKRNVYHCN ENSTTRP00000010857/1-1410 LYSEVDVHFR MIHEDTRHLL CPYCLKVFKN GNAFQQHYMR HQKRNVYHCN bmy_16036T0/1-1401 LYSEVDVHFR MIHEDTRHLL CPYCLKVFKN GNAFQQHYMR HQKRNVYHCN BACU007254/1-1342 LYSEVDVHFR MIHEDTRHLL CPYCLKVFKN GNAFQQHYMR HQKRNVYHCN 651 700 ENSP00000271715/1-1410 KCRLQFLFAK DKIEHKLQHH KTFRKPKQLE GLKPGTKVTI RASRGQPRTV ENSBTAP00000033789/1-1287 KCRLQFLFAK DKIEHKLQHH KTFRKPKQLE GLKPGTKVTI RASRGQPRTA ENSTTRP00000010857/1-1410 KCRLQFLFAK DKIEHKLQHH KTFRKPKQLE GLKPGTKVTI RASRGQPRTV bmy_16036T0/1-1401 KCRLQFLFAK DKIEHKLQHH KTFRKPKQLE GLKPGTKVTI RASRGQPRTV BACU007254/1-1342 KCRLQFLFAK DKIEHKLQHH KTFRKPKQLE GLKPGTKVTI RASRGQPRTV 701 750 ENSP00000271715/1-1410 PVSSNDTPPS ALQEAAPLTS SMDPLPVFLY PPVQRSIQKR AVRKMSVMGR ENSBTAP00000033789/1-1287 PVPSSDGPPG SLQEAAPLAS SADPLPVFLY PPVQRNVQKR AVRKMSVMGR ENSTTRP00000010857/1-1410 PVPSSDVPPS TLQEAAPLAS SADPLPVFLY PPVQRNVQKR AVRKMSVMGR bmy_16036T0/1-1401 PVPSSDVPPS TLQEAAPLA- SADPLPVFLY PPVQRNVQKR AVRKMSVMGR BACU007254/1-1342 PVPSSDVPPS TLQEAAPLAS SADPLPVFLY PPVQRNVQKR AVRKMSVMGR 751 800 ENSP00000271715/1-1410 QTCLECSFEI PDFPNHFPTY VHCSLCRYST CCSRAYANHM INNHVPRKSP ENSBTAP00000033789/1-1287 QTCLECSFEI PDFPNHFPTY VHCSLCRYST CCSRAYANHM INNHVPRKSP ENSTTRP00000010857/1-1410 QTCLECSFEI PDFPNHFPTY VHCSLCRYST CCSRAYANHM INNHVPRKSP bmy_16036T0/1-1401 QTCLECSFEI PDFPNHFPTY VHCSLCRYST CCSRAYANHM INNHVPRKSP BACU007254/1-1342 QTCLECSFEI PDFPNHFPTY VHCSLCRYST CCSRAYANHM INNHVPRKSP 801 850 ENSP00000271715/1-1410 KYLALFKNSV SGIKLACTSC TFVTSVGDAM AKHLVFNPSH RSSSILPRGL ENSBTAP00000033789/1-1287 KYLALFKNSV SGSKLACTSC TFVTSVGDAM AKHLVFNPSH RSSSILPRGL ENSTTRP00000010857/1-1410 KYLALFKNSV SGIKLACTSC TFVTSVGDAM AKHLVFNPSH RSSSILPRGL bmy_16036T0/1-1401 KYLALFKNSV SGIKLACTSC TFVTSVGDAM AKHLVFNPSH RSSSILPRGL BACU007254/1-1342 KYLALFKNSV SGIKLACTSC TFVTSVGDAM AKHLVFNPSH RSSSILPRGL 851 900 ENSP00000271715/1-1410 TWIAHSRHGQ TRDRVHDRNV KNMYPPPSFP TNKAATVKSA GATPAEPEEL ENSBTAP00000033789/1-1287 TWISHSRHGQ TRDRAHDRNL KNLYPPPSFS SNKAATVKSA GVTPAEPEEL ENSTTRP00000010857/1-1410 TWISHSRHGQ TRDRVHDRNL KNLYPPPSFP SIKAATVKSA GATPAEPEEL bmy_16036T0/1-1401 TWISHSRHGQ TRDRVHDRNL KNLYPPPSFP SIKAATVKSA GATPAEPEEL BACU007254/1-1342 TWIAHSRHGQ TRDRVHDRNL KNLYPPPSFP SIKAATVKSA GATPAEPEEL 901 950 ENSP00000271715/1-1410 LTPLAPALPS PASTATPPPT PTHPQALALP PLATEGAECL NVDDQDEGSP ENSBTAP00000033789/1-1287 PAPVAQALPS PASTATPPPT PTHLQTLALP PLAAEEAECL NVDDQDEGSP ENSTTRP00000010857/1-1410 PAPMAQALPS PASTATPPPT PTHPQPLALP PLATEGAECL NVDDQDEGSP bmy_16036T0/1-1401 PAPMAQALPS PASTATPPPT PTHPQPLALP PLATEGAECL NVDDQDEGSP BACU007254/1-1342 PAPMAQALPS PASTATPPPT PTHPQPLALP PLATEGAECL NVDDQDEGSP 951 1000 ENSP00000271715/1-1410 VTQEPELASG GGGSGGVGKK EQLSVKKLRV VLFALCCNTE QAAEHFRNPQ ENSBTAP00000033789/1-1287 VTQEPEPASG GGSSSGIGKK EQLSVKKLRV VLFALCCNTE QAAEHFRNPQ ENSTTRP00000010857/1-1410 VTQEPEPASG GGSSSVIGKK EQLSVKKLRV VLFALCCNTE QAAEHFRNPQ bmy_16036T0/1-1401 VTQEPEPASG GGSSSVIGKK EQLSVKKLRV VLFALCCNTE QAAEHFRNPQ BACU007254/1-1342 VTQEPEPASG GGSSSVIGKK EQLSVKKLRV VLFALCCNTE QAAEHFRNPQ 1001 1050 ENSP00000271715/1-1410 RRIRRWLRRF QASQGENLEG KYLSFEAEEK LAEWVLTQRE QQLPVNEETL ENSBTAP00000033789/1-1287 RRIRRWLRRF QASQGESLEG KYLSLEAEEK LAEWVLTQRE QQLPVNEETL ENSTTRP00000010857/1-1410 RRIRRWLRRF QASQGENLEG KYLSLEAEEK LAEWVLTQRE QQLPVNEETL bmy_16036T0/1-1401 RRIRRWLRRF QASQGENLEG KYLSLEAEEK LAEWVLTQRE QQLPVNEETL BACU007254/1-1342 RRIRRWLRRF QASQGENLEG KYLSLEAEEK LAEWVLTQRE QQLPVNEETL 1051 1100 ENSP00000271715/1-1410 FQKATKIGRS LEGGFKISYE WAVRFMLRHH LTPHARRAVA HTLPKDVAEN ENSBTAP00000033789/1-1287 FQKATKIGRS LEGGFKISYE WAVRFMLRHH LTPHARRAVA HTLPKDVAEN ENSTTRP00000010857/1-1410 FQKATKIGRS LEGGFKISYE WAVRFMLRHH LTPHARRAVA HTLPKDVAEN bmy_16036T0/1-1401 FQKATKIGRS LEGGFKISYE WAVRFMLRHH LTPHARRAVA HTLPKDVAEN BACU007254/1-1342 FQKATKIGRS LEGGFKISYE WAVRFMLRHH LTPHARRAVA HTLPKDVAEN 1101 1150 ENSP00000271715/1-1410 AGLFIDFVQR QIHNQDLPLS MIVAIDEISL FLDTEVLSSD DRKENALQTV ENSBTAP00000033789/1-1287 AGLFIEFVQR QIHNQDLSLS MIVAIDEVSL FLDTEVLSSE DRKENALQTV ENSTTRP00000010857/1-1410 AGLFIEFV-R QIHNQDLPLS MIVAIDEISL FLDTEVLSSD DRKENAXXXX bmy_16036T0/1-1401 AGLFIEFVQR QIHNQDLPLS MIVAIDEVSL FLDTEVLSSD DRKENALQTV BACU007254/1-1342 AGLFIEFVQR QIHNQDLPLS MIVAIDEVSL FLDTKVLSSD DRKENALQTV 1151 1200 ENSP00000271715/1-1410 GTGEPWCDVV LAILADGTVL PTLVFYRGQM DQPANMPDSI LLEAKESGYS ENSBTAP00000033789/1-1287 GTGEPWCDVV LAILADGTVL PTLVFYRGQV DQPANVPDSI LLEAKESGYS ENSTTRP00000010857/1-1410 XXXXXXXXXX XXXXXXXXXL PTLV-YRGQM DQ-ANVPDSI LLEAKESGYS bmy_16036T0/1-1401 GTGEPWCDVV LAILADGTVL PTLVFYRGQM DQPANVPDSI LLEAKESGYS BACU007254/1-1342 GTGEPWCDVV LAILADGTVL PTLVFYRGQM DQPANVPDSI LLEAKESGYS 1201 1250 ENSP00000271715/1-1410 DDEIMELWST RVWQKHTACQ RSKGMLVMDC HRTHLSEEVL AMLSASSTLP ENSBTAP00000033789/1-1287 DDEIMELWST RVWQKHTACQ RSKGMLVMDC HRTHLSEEVL AMLSASSTLP ENSTTRP00000010857/1-1410 DDEIMELWST RVWQKHTACQ HSKGMLVMDC HRTHLSEEVL AMLSASSTLP bmy_16036T0/1-1401 DDEIMELWST RVWQKHTACQ RSKGMLVMDC HRTHLSEEVL AMLSASSTLP BACU007254/1-1342 DDEIMELWSA RVWQKHTACQ RSRGMLVMDC HRTHLSEEVL AMLSASSTLP 1251 1300 ENSP00000271715/1-1410 AVVPAGCSSK IQPLDVCIKR TVKNFLHKKW KEQAREMADT ACDSDVLLQL ENSBTAP00000033789/1-1287 AVIPAGCSSK IQPLDVCIKR TVKNFLHKKW KEQAREMADT ACDSDVLLQL ENSTTRP00000010857/1-1410 AVVPAGCSSK IQPLDVCIKR TVKNFLHKKW KEQAREMADS ACDSDVLLQL bmy_16036T0/1-1401 AVVPAGCSSK IQPLDVCIKR TVKNFLHKKW KEQAREMADS ACDSDVLLQL BACU007254/1-1342 AVVPAGCSSK IQPLDVCIKR TVKNFLHKKW KEQAREMADS ACDSDVLLQL 1301 1350 ENSP00000271715/1-1410 VLVWLGEVLG VIGDCPELVQ RSFLVASVLP GPDGNINSPT RNADMQEELI ENSBTAP00000033789/1-1287 VLVWLAEVLG VIGDCPELVQ RSFLVASVLP GPDGNMNSPT RNADMQEELI ENSTTRP00000010857/1-1410 LLVWLAEVLG VIGDCPELVQ RSFLVASVLP GPDGNINSPT RNADMQEELI bmy_16036T0/1-1401 VLVWLAEVLG VIGDCPELVQ RSFLVASVLP GPDGNINSPT RNADMQEELI BACU007254/1-1342 VLVWLAEVLG VIGDCPELVQ RSFLVASVLP GPDGNINSPT RNADMQEELI 1351 1400 ENSP00000271715/1-1410 ASLEEQLKLS GEHSE---SS TPRPRSSPEE TIEPESLHQL FEGESETESF ENSBTAP00000033789/1-1287 ASLEEQLKLS GEQSEEPSAS TPRPRSSPEE TIEPESLHQL FEGESETESF ENSTTRP00000010857/1-1410 ASLEEQLKLS GEQSEEASAS TPRPRSSPEE TVEPESLHQL FEGESETESF bmy_16036T0/1-1401 ASLEEQLKLS GEQSEEASAS TPRPRSSPEE TVEPESLHQL FEGESETESF BACU007254/1-1342 ASLEEQLKLS GEQSEEASAS TPRPRSSPEE TVEPESLHQL FEGESETESF 1401 1450 ENSP00000271715/1-1410 YGFEEADLDL MEI ENSBTAP00000033789/1-1287 YGFEEADLDL MEI ENSTTRP00000010857/1-1410 YGFEEADLDL MEI bmy_16036T0/1-1401 YGFEEADLDL MEI BACU007254/1-1342 YGFEEADLDL MEI