KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:43:46 2014 Check: 00 .. Name: ENSTTRP00000000751/1-248 Len: 282 Check: 9874 Weight: 1.00 Name: bmy_09679T0/1-282 Len: 282 Check: 3279 Weight: 1.00 Name: ENSBTAP00000033800/1-248 Len: 282 Check: 9706 Weight: 1.00 Name: ENSP00000357683/1-248 Len: 282 Check: 9937 Weight: 1.00 // 1 50 ENSTTRP00000000751/1-248 MAAQSAPKVV LKSTTKMSLN ER-----FTN MLKNKQPMPV NIRASMQQQQ bmy_09679T0/1-282 MAAQSAPKVV LKSTTKMSLN ERGGAARFTN MLKNKQPMPV NIRASMQQQQ ENSBTAP00000033800/1-248 MAAQSAPKVV LKSTTKMSLN ER-----FTN MLKNKQPMPV NIRASMQQQQ ENSP00000357683/1-248 MAAQSAPKVV LKSTTKMSLN ER-----FTN MLKNKQPTPV NIRASMQQQQ 51 100 ENSTTRP00000000751/1-248 QLASARNRRL AQQMENRPSV QAALKLKQ-- ---------- ---------- bmy_09679T0/1-282 QLASARNRRL AQQMENRPSV QAALKLKQTL YASPDSGCGR ICPSCGWASG ENSBTAP00000033800/1-248 QLASARNRRL AQQMENRPSV QAALKLKQ-- ---------- ---------- ENSP00000357683/1-248 QLASARNRRL AQQMENRPSV QAALKLKQ-- ---------- ---------- 101 150 ENSTTRP00000000751/1-248 -------SLK QRLGKSNIQA RLGRPIGALA RGAIGGRGLP IIQRGLSRGG bmy_09679T0/1-282 GRCHATKSLK QRLGKSNIQA RLGRPIGALA RGAIGGRGLP IIQRGLPRGG ENSBTAP00000033800/1-248 -------SLK QRLGKSNIQA RLGRPIGALA RGAIGGRGLP IIQRGLPRGG ENSP00000357683/1-248 -------SLK QRLGKSNIQA RLGRPIGALA RGAIGGRGLP IIQRGLPRGG 151 200 ENSTTRP00000000751/1-248 LRGGRATRTL LRGGMSLRGQ NLLRGGRAVA PRMGLRRGGV RGRGGPGRGG bmy_09679T0/1-282 LRGGRATRTL LRGGMSLRGQ NLLRGGRAVA PRMGLRRGGV RGRGGPGRGG ENSBTAP00000033800/1-248 LRGGRATRTL LRGGMSLRGQ NLLRGGRAVA PRMGLRRGGV RGRGGPGRGG ENSP00000357683/1-248 LRGGRATRTL LRGGMSLRGQ NLLRGGRAVA PRMGLRRGGV RGRGGPGRGG 201 250 ENSTTRP00000000751/1-248 LGRGAMGRGG IGGRGRGMIG RGRGGFGGRG RGRGRGRGAL ARPVLTKEQL bmy_09679T0/1-282 LGRGAMGRGG IGGRGRGMIG RGRGGFGGRG RGRGRGRGAL ARPVLTKEQL ENSBTAP00000033800/1-248 LGRGAMGRGG IGGRGRGMIG RGRGGFGGRG RGRGRGRGAL ARPVLTKEQL ENSP00000357683/1-248 LGRGAMGRGG IGGRGRGMIG RGRGGFGGRG RGRGRGRGAL ARPVLTKEQL 251 300 ENSTTRP00000000751/1-248 DNQLDAYMSK TKGHLDAELD AYMAQTDPET ND bmy_09679T0/1-282 DNQLDAYMSK TKGHLDAELD AYMAQTDPET ND ENSBTAP00000033800/1-248 DNQLDAYMSK TKGHLDAELD AYMAQTDPET ND ENSP00000357683/1-248 DNQLDAYMSK TKGHLDAELD AYMAQTDPET ND