KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:47 2014 Check: 00 .. Name: ENSTTRP00000000504/1-921 Len: 964 Check: 8569 Weight: 1.00 Name: ENSP00000307078/1-963 Len: 964 Check: 5105 Weight: 1.00 Name: ENSBTAP00000033805/1-963 Len: 964 Check: 4944 Weight: 1.00 Name: bmy_17621T0/1-914 Len: 964 Check: 8935 Weight: 1.00 Name: BACU017199/1-869 Len: 964 Check: 3916 Weight: 1.00 // 1 50 ENSTTRP00000000504/1-921 ---------- ---------- ---------- ---------- --SKPYAFDR ENSP00000307078/1-963 MADLAECNIK VMCRFRPLNE SEVNRGDKYI AKFQGEDTVV IASKPYAFDR ENSBTAP00000033805/1-963 MADPAECNIK VMCRFRPLNE SEVNRGDKYI AKFQGEDTVM IASKPYAFDR bmy_17621T0/1-914 MADPAECNIK VMCRFRPLNE SEVNRGDRYI VKFQEEDTIT IASKPYAFDR BACU017199/1-869 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000000504/1-921 VFQSNTSQEQ VYNDCAKKIV KDVLEGYNGT IFAYGQTSSG KTHTMEGKLH ENSP00000307078/1-963 VFQSSTSQEQ VYNDCAKKIV KDVLEGYNGT IFAYGQTSSG KTHTMEGKLH ENSBTAP00000033805/1-963 VFQSNTSQEQ VYNDCAKKIV KDVLEGYNGT IFAYGQTSSG KTHTMEGKLH bmy_17621T0/1-914 VFQSNTSQEQ VYNDCAKKIV KDVLEGYNGT IFAYGQTSSG KTHTMEGKLH BACU017199/1-869 ---------- ---------- ---------- ---------- ----MEGKLH 101 150 ENSTTRP00000000504/1-921 DPEGMGIIPR IVQDIFNYIY SMDENLEFHI KVSYFEIYLD KIRDLLDVSK ENSP00000307078/1-963 DPEGMGIIPR IVQDIFNYIY SMDENLEFHI KVSYFEIYLD KIRDLLDVSK ENSBTAP00000033805/1-963 DPEGMGIIPR IVQDIFNYIY SMDENLEFHI KVSYFEIYLD KIRDLLDVSK bmy_17621T0/1-914 DPEGMGIIPR IVQDIFNYIY SMDENLEFHI KVSYFEIYLD KIRDLLDVSK BACU017199/1-869 DPEGMGIIPR IVQDIFNYIY SMDENLEFHI KVSYFEIYLD KIRDLLDVSK 151 200 ENSTTRP00000000504/1-921 TNLSVHEDKN RVPYVKGCTE RFVCSPDEVM DTIDEGKSNR HVAVTNMNEH ENSP00000307078/1-963 TNLSVHEDKN RVPYVKGCTE RFVCSPDEVM DTIDEGKSNR HVAVTNMNEH ENSBTAP00000033805/1-963 TNLSVHEDKN RVPYVKGCTE RFVCSPDEVM DTIDEGKSNR HVAVTNMNEH bmy_17621T0/1-914 TNLSVHEDKN RVPYVKGCTE RFVCSPDEVM DTIDEGKSNR HVAVTNMNEH BACU017199/1-869 TNLSVHEDKN RVPYVKGCTE RFVCSPDEVM DTIDEGKSNR HVAVTNMNEH 201 250 ENSTTRP00000000504/1-921 SSRSHSIFLI NVKQENTQTE QKLSGKLYLV DLAGSEKVSK TGAEGAVLDE ENSP00000307078/1-963 SSRSHSIFLI NVKQENTQTE QKLSGKLYLV DLAGSEKVSK TGAEGAVLDE ENSBTAP00000033805/1-963 SSRSHSIFLI NVKQENTQTE QKLSGKLYLV DLAGSEKVSK TGAEGAVLDE bmy_17621T0/1-914 SSRSHSIFLI NVKQENTQTE QKLSGKLYLV DLAGSEKVSK TGAEGAVLDE BACU017199/1-869 SSRSHSIFLI NVKQENTQTE QKLSGKLYLV DLAGSEKVSK TGAEGAVLDE 251 300 ENSTTRP00000000504/1-921 AKNINKSLSA LGNVISALAE GSTYVPYRDS KMTRILQDSL GGNCRTTIVI ENSP00000307078/1-963 AKNINKSLSA LGNVISALAE GSTYVPYRDS KMTRILQDSL GGNCRTTIVI ENSBTAP00000033805/1-963 AKNINKSLSA LGNVISALAE GSTYVPYRDS KMTRILQDSL GGNCRTTIVI bmy_17621T0/1-914 AKNINKSLSA LGNVISALAE GSTYVPYRDS KMTRILQDSL GGNCRTTIVI BACU017199/1-869 AKNINKSLSA LGNVISALAE GSTYVPYRDS KMTRILQDSL GGNCRTTIVI 301 350 ENSTTRP00000000504/1-921 CCSPSSYNES ETKSTLLFGQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000307078/1-963 CCSPSSYNES ETKSTLLFGQ RAKTIKNTVC VNVELTAEQW KKKYEKEKEK ENSBTAP00000033805/1-963 CCSPSSYNES ETKSTLLFGQ RAKTIKNTVC VNVELTAEQW KKKYEREKEK bmy_17621T0/1-914 CCSPSSYNES ETKSTLLFGQ RAKTIKNTVC VNVELTAEQW KKKYEREKEK BACU017199/1-869 CCSPSSYNES ETKSTLLFGQ RAKTIKNTVC VNVELTAEQW KKKYEREKEK 351 400 ENSTTRP00000000504/1-921 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000307078/1-963 NKILRNTIQW LENELNRWRN GETVPIDEQF DKEKANLEAF TVDKDITLTN ENSBTAP00000033805/1-963 NKTLRNTIQW LENELNRWRN GETVPIDEQF DKEKANLEAF AVDKDITITN bmy_17621T0/1-914 NKTLRNTIQW LENELNRWRN GETVPIDEQF DKEKANLEAF AVDKDITITN BACU017199/1-869 NKTLRNTIQW LENELNRWRN GETVPIDEQF DKEKANLEAF AVDKDITITN 401 450 ENSTTRP00000000504/1-921 XXXXXXIGVT GNFTDSE-RK CEEEIAKLYK QLDDKDEEIN QQSQLVEKLK ENSP00000307078/1-963 DKPATAIGVI GNFTDAERRK CEEEIAKLYK QLDDKDEEIN QQSQLVEKLK ENSBTAP00000033805/1-963 DKPAATIGVT GSFTDAERRK CEEEIAKLYK QLDDKDEEIN QQSQLVEKLK bmy_17621T0/1-914 DKPAATIGVT GNFTDSERRK CEEEIAKLYK QLDDKDEEIN QQSQLVEKLK BACU017199/1-869 DKPAATIGVT GNFTDSERRK CEEEIAKLYK QLDDKDEEIN QQSQLVEKLK 451 500 ENSTTRP00000000504/1-921 TQMLDQEELL ASTRRDQDNM QAELNRLQAE NDASKEEVKE VLQALEELAV ENSP00000307078/1-963 TQMLDQEELL ASTRRDQDNM QAELNRLQAE NDASKEEVKE VLQALEELAV ENSBTAP00000033805/1-963 TQMLDQEELL ASTRRDQDNM QTELNRLQAE NDASKEEVKE VLQALEELAV bmy_17621T0/1-914 TQMLDQEELL ASTRRDQDNM QAELNRLQAE NDASKEEVKE VLQALEELAV BACU017199/1-869 TQMLDQEELL ASTRRDQDNM QAELNRLQAE NDASKEEVKE VLQALEELAV 501 550 ENSTTRP00000000504/1-921 NYDQKSQEVE DKTKEYELLS DELNQKSXXX XXXXXXXXXX XXXXXXXXXX ENSP00000307078/1-963 NYDQKSQEVE DKTKEYELLS DELNQKSATL ASIDAELQKL KEMTNHQKKR ENSBTAP00000033805/1-963 NYDQKSQEVE DKTKEYELLS DELNQKSASL ASIDAELQKL KEMTNHQKKR bmy_17621T0/1-914 NYDQKSQEVE DKTKEYELLS DELNQKS--- ---------- ---------- BACU017199/1-869 NYDQKSQEVE DKTKEYELLS DELNQKSASL ASIDAELQKL KEMTNHQKKR 551 600 ENSTTRP00000000504/1-921 XXXXXXXXXX XXXXXXXXXX XXXXXQPEGT GMIDEEFTVA RLYISKMKSE ENSP00000307078/1-963 AAEMMASLLK DLAEIGIAVG NNDVKQPEGT GMIDEEFTVA RLYISKMKSE ENSBTAP00000033805/1-963 AAEMMASLLK DLAEIGIAVG NNDVKQPEGT GMIDEEFTVA RLYISKMKSE bmy_17621T0/1-914 ---------- ---------- -----QPEGT GMIDEEFTVA RLYISKMKSE BACU017199/1-869 AAEMMASLLK DLAEIGIAVG NNDVKQPEGT GMIDEEFTVA RLYISKMKSE 601 650 ENSTTRP00000000504/1-921 VKTMVKRCRQ LESTQTESSR KVEENEKELA ACQLRISQHE AKIRSLTEYL ENSP00000307078/1-963 VKTMVKRCKQ LESTQTESNK KMEENEKELA ACQLRISQHE AKIKSLTEYL ENSBTAP00000033805/1-963 VKTMVKRCKQ LESTQTESNK KMEENEKELA ACQLRISQHE AKIKSLTEYL bmy_17621T0/1-914 VKTMVKRCKQ LESTQTESNK KMEESEKELA ACQLRISQHE AKIRSLTEYL BACU017199/1-869 VKTMVKRCKQ LESTQIESNK KMEENEKELA ACQLRISQHE AKIRSLTEYL 651 700 ENSTTRP00000000504/1-921 QNVEQKKRQL EESVDSLSEE LVQLRAQEKV HEMEKEHLNK VQTANEVKQA ENSP00000307078/1-963 QNVEQKKRQL EESVDALSEE LVQLRAQEKV HEMEKEHLNK VQTANEVKQA ENSBTAP00000033805/1-963 QNVEQKKRQL EESVDSLTEE LVQLRAQEKV HEMEKEHLNK VQTANEVKQA bmy_17621T0/1-914 QNVEQKKRQL EESVDSLSEE LVQLRAQGFG KESKGNHNSN TKTIT--KQA BACU017199/1-869 QNVEQKKRQL EESVDSLSEE LVQLRAQEKV HEMEKEHLNK VQTANEVKQA 701 750 ENSTTRP00000000504/1-921 VEQQIQSHRE THQKQISSLR DEVEAKEKLI TDLQDQNQKM ALEQGRLRAE ENSP00000307078/1-963 VEQQIQSHRE THQKQISSLR DEVEAKAKLI TDLQDQNQKM MLEQERLRVE ENSBTAP00000033805/1-963 VEQQIQSHRE THQKQISSLR DEVEAKEKLI TDLQDQNQKM MLEQERLRVE bmy_17621T0/1-914 VEQQIQSHRE THQKQISSLR DEVEAKEKLI TDLQDQNQKM ALEQGRLRAE BACU017199/1-869 VEQQIQSHRE THQKQISSLR DEVEAKEKLI TDLQDQNQKM ALEQGRLRAE 751 800 ENSTTRP00000000504/1-921 HEKLKATEQD KSRKLRELTV MQDRREQARQ DLKGLEETVA KELQTLHNLR ENSP00000307078/1-963 HEKLKATDQE KSRKLHELTV MQDRREQARQ DLKGLEETVA KELQTLHNLR ENSBTAP00000033805/1-963 HEKLKATDQE KSRKLHELTV MQDRREQARQ DLKGLEETVA KELQTLHNLR bmy_17621T0/1-914 HEKLKAAEQD KSRKLRELTV MQDRREQARQ DLKGLEETVA KELQTLHNLR BACU017199/1-869 HEKLKAAEQD KSRKLRELTV MQDRREQARQ DLKGLEETVA KELQTLHNLR 801 850 ENSTTRP00000000504/1-921 KLFVQDLATR VKKSAEVDSD DTGGSAAQKQ KISFLENNLE QLTKVHKQLV ENSP00000307078/1-963 KLFVQDLATR VKKSAEIDSD DTGGSAAQKQ KISFLENNLE QLTKVHKQLV ENSBTAP00000033805/1-963 KLFVQDLATR VKKSAEIDSD DTGGSAAQKQ KISFLENNLE QLTKVHKQLV bmy_17621T0/1-914 KLFVQDLATR VKKSAEVDSD DTGGSAAQKQ KISFLENNLE QLTKVHKQLV BACU017199/1-869 KLFVQDLATR VKKSAEVDSD DTGGSAAQKQ KISFLENNLE QLTKVHKQLV 851 900 ENSTTRP00000000504/1-921 RDNADLRCEL PKLEKRLRAT AERVKALESA LKEAKENASR DRKRYQQEVD ENSP00000307078/1-963 RDNADLRCEL PKLEKRLRAT AERVKALESA LKEAKENASR DRKRYQQEVD ENSBTAP00000033805/1-963 RDNADLRCEL PKLEKRLRAT AERVKALESA LKEAKENASR DRKRYQQEVD bmy_17621T0/1-914 RDNADLRCEL PKLEKRLRAT AERVKALESA LKEAKENASR DRKRYQQEVD BACU017199/1-869 RDNADLRCEL PKLEKRLRAT AERVKALESA LKEAKENASR DRKRYQQEVD 901 950 ENSTTRP00000000504/1-921 RIKEAVRSKN MARRGHSAQI AKPIRPGQHP AASPAHPSAV RGGGAPVQNG ENSP00000307078/1-963 RIKEAVRSKN MARRGHSAQI AKPIRPGQHP AASPTHPSAI RGGGAFVQNS ENSBTAP00000033805/1-963 RIKEAVRSKN MARRGHSAQI AKPIRPGQHP AASPTHPSAI RGGGAFVQNS bmy_17621T0/1-914 RIKEAVRSKN MARRGHSAQI AKPIRPGQHP AASPAHPSAV RGGGASVQNG BACU017199/1-869 RIKEAVRSKN MARRGHSAQI AKPIRPGQHP AASPAHPSAV RGGGASVQNG 951 1000 ENSTTRP00000000504/1-921 PPAAVRGGGG EQAW ENSP00000307078/1-963 QPVAVRGGGG KQV- ENSBTAP00000033805/1-963 QPVAVRGGGG KQV- bmy_17621T0/1-914 PPAAVRGGGG VKSN BACU017199/1-869 PP-AVRGGGG VKSN