KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:43:57 2014 Check: 00 .. Name: ENSBTAP00000033870/1-600 Len: 601 Check: 539 Weight: 1.00 Name: ENSTTRP00000013747/1-475 Len: 601 Check: 7274 Weight: 1.00 Name: bmy_16682T0/1-360 Len: 601 Check: 3163 Weight: 1.00 Name: BACU012844/1-212 Len: 601 Check: 2244 Weight: 1.00 // 1 50 ENSBTAP00000033870/1-600 MAGEGQRAEP EREGWALYVT PRAPLREGRP RLAPQNGGSG DVPAYGTPTP ENSTTRP00000013747/1-475 ---------- ---------- ---------- ---------- ---------- bmy_16682T0/1-360 ---------- ---------- ---------- ---------- ---------- BACU012844/1-212 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000033870/1-600 SRHGRREVRF SEEPPEVYGD FEPRAAKEKA RVGRQIPLEG FRPDSAKEEV ENSTTRP00000013747/1-475 ---------- ---------- ---------- ---------- ---------- bmy_16682T0/1-360 ---------- ---------- ---------- ---------- ---------- BACU012844/1-212 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000033870/1-600 RESAYYLRSR QRRQPRLHEA EEMQTRRAAL LQQQPHSPPP PLRPSPVTTR ENSTTRP00000013747/1-475 --------SR QRRQPRLQEA E-MKTRRATR LQQQQYSEPP PLQPSPVTTR bmy_16682T0/1-360 ---------- ---------- ---------- ---------- ---------- BACU012844/1-212 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000033870/1-600 RGLRDSHSSE EDEPPSQTVL SQTVTKKAIR RTQETPVMSE DPLISLRRPP ENSTTRP00000013747/1-475 RGLRDSHSSE EDEPPSQTVL SPTVSKNTIR RTQ-TPXXXX XXXXXXXXXX bmy_16682T0/1-360 ---------- ---------- ---------- ---------- ---------- BACU012844/1-212 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000033870/1-600 LRSSRSEAAS VQQKVNFLEE GETEENDQDS FDSDVTVK-V RSGDSVESGD ENSTTRP00000013747/1-475 XXXXXXXATS VQQKINFSEE GETEENDQDS SDSDVTVV-V RSGDSVESGX bmy_16682T0/1-360 ---------- ---------- -ETEEDDQDS SDSDVTVVKV RSGDSVESGG BACU012844/1-212 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000033870/1-600 QTTRSSSQYK ESFWQSSQSG DFTAFDEQPL KLSSGYQKTP QEWAEKTVRI ENSTTRP00000013747/1-475 XXXXXXXXXX XXXXXXXXXP DFTAFDKQPL VLSSGYQKNP QEWVEKTTRI bmy_16682T0/1-360 R--------- ---------- DFTAFDKQPL VLSSGYQKNP QEWVEQTTRI BACU012844/1-212 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000033870/1-600 RTRMLTSSPG MRSIYGSFSD DDSVQKSELG NQSPSTSNQQ MTGQPKSVSS ENSTTRP00000013747/1-475 RTRMQ----- ---------- NDGVQKSELG NQSPSASSQQ VTGQPQSASF bmy_16682T0/1-360 RTRMQTSSPG KRSIYGSFSD DDGVQKSELG NQSPSTSSQQ VTGQPKSASF BACU012844/1-212 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000033870/1-600 VKTKRYWPFA VIAALLIGGF LYTRPPEAET TAVQEFQNQM KQLMNKYQGQ ENSTTRP00000013747/1-475 VKVKWWWPLV LIAGLLIGCF LYTRTPEAET TAVQEFQNQM KQLMNKYQGQ bmy_16682T0/1-360 VKVK-WCTLV LMAAVLIGCF WYTHTREAET AAVQEFQNQM KQLMNKYQGQ BACU012844/1-212 ---------- ---------- ---------- ---------M KQLMNKYQGQ 401 450 ENSBTAP00000033870/1-600 DEKLWKRSQT FLEKHLNGSQ SRPQPAILLL TAARDAEEAL RCLSEQIADA ENSTTRP00000013747/1-475 DEKLWKRSLT FLEKHLNSSH PRPQPAILLL TAARDAEEAL KCLSEQIADA bmy_16682T0/1-360 DEKLWKRSLT FLEKHLNSSH PRPQPAILLL TAARDAEEAL KCLSEQIADA BACU012844/1-212 DEKLWKRSLT FLEKHLNSSH PRPQPAILLL TAARDAEEAL KCLSEQIADA 451 500 ENSBTAP00000033870/1-600 YSSFRSVPAI RIDGASKATR DSDTVKEEVD QELSNGFRNG QNAAVVHRFE ENSTTRP00000013747/1-475 YSSFQSVPAI RIDGTGKATQ DSDVVKQEVD EELSNGFRNG QNAAVVHRFE bmy_16682T0/1-360 YSSFRSVPAI RIDGAGKATQ DSDVVKREVD QELSNGFRNG QNAAVVHRFE BACU012844/1-212 YSSFQSVPAI RIDGAGKATQ DSDVVKLEVD QELSNGFLNG QNAAVVHRFE 501 550 ENSBTAP00000033870/1-600 SLPAGSTLIF YKYCDHESAA FKDVALVLTV LLEEETLGTS LGLKEIEEKV ENSTTRP00000013747/1-475 SLPAGSTLIF YKYCDHENAA FKDVALVLTV LLEEETLGTS LGLKEIEEKV bmy_16682T0/1-360 SLPAGSTLIF YKYCDHENAA FKDVALVLTV LLEEETLGTS LGLKEIEEKV BACU012844/1-212 SLPAASALIF YKYCDHENAA FKDVALVLTV LLEEETLGTS LGLKEIEEKV 551 600 ENSBTAP00000033870/1-600 RDFLQVKFTN SDTPNSYKHM DPDKLSGLWS RISHLVLPVQ PENDLKKGIC ENSTTRP00000013747/1-475 RDFLKLKFTN SDTPNSYKHM DPDKLSGLWS RISHLVLPVQ PENDLKRGIC bmy_16682T0/1-360 RDFLKVKFTN SDTPNSYKHM DPDKLSGLWS RISHLVLPVQ PENDLKRGIC BACU012844/1-212 RDFLKVKFTN SDTPNSYKHM DPDKLSGLWS RISHLVLPVQ PENDLKRGIC 601 650 ENSBTAP00000033870/1-600 L ENSTTRP00000013747/1-475 L bmy_16682T0/1-360 L BACU012844/1-212 L