KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:00 2014 Check: 00 .. Name: ENSTTRP00000008574/1-578 Len: 583 Check: 5205 Weight: 1.00 Name: bmy_08538T0/1-389 Len: 583 Check: 9594 Weight: 1.00 Name: ENSP00000356607/1-583 Len: 583 Check: 3261 Weight: 1.00 Name: ENSBTAP00000033902/1-583 Len: 583 Check: 2967 Weight: 1.00 Name: BACU019537/1-526 Len: 583 Check: 9238 Weight: 1.00 // 1 50 ENSTTRP00000008574/1-578 MDLMNGQASS VNIAATASEK SSSSESLSDK GSELKKSFDA VVFDVLKVTP bmy_08538T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000356607/1-583 MDLMNGQASS VNIAATASEK SSSSESLSDK GSELKKSFDA VVFDVLKVTP ENSBTAP00000033902/1-583 MDLMNGQASN VNIAATASEK SSSSESLSDK GSELKKSFDA VVFDVLKVTP BACU019537/1-526 ---------- --------QK SSSSESLSDK GSELKKSFDA VVFDVLKVTP 51 100 ENSTTRP00000008574/1-578 EEYAGQITLM DVPVFKAIQP DELSSCGWNK KEKYSSAPNA VAFTRRFNHV bmy_08538T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000356607/1-583 EEYAGQITLM DVPVFKAIQP DELSSCGWNK KEKYSSAPNA VAFTRRFNHV ENSBTAP00000033902/1-583 EEYAGQITLM DVPVFKAIQP DELASCGWNK KEKYSSAPNA VAFTRRFNHV BACU019537/1-526 EEYAGQITLM DVPVFKAIQP DELSSCGWNK KEKYSSAPNA VAFTRRFNHV 101 150 ENSTTRP00000008574/1-578 SFWVVREILH AQTLKIRAEV LSHYIKTAKK LYELNNLHAL MAVVSGLQSA bmy_08538T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000356607/1-583 SFWVVREILH AQTLKIRAEV LSHYIKTAKK LYELNNLHAL MAVVSGLQSA ENSBTAP00000033902/1-583 SFWVVREILH AQTLKIRAEV LSHYIKTAKK LYELNNLHAL MAVVSGLQSA BACU019537/1-526 SFWVVREILH AQTLKIRAEV LSHYIKTAKK LYELNNLHAL MAVVSGLQSA 151 200 ENSTTRP00000008574/1-578 PIFRLTKTWA LLSRKDKTTF EKLEYVMSKE DNYKRLRDYI SSLKMTPCIP bmy_08538T0/1-389 ---------- ---------- ----MVMGRA SR-------- ---------- ENSP00000356607/1-583 PIFRLTKTWA LLSRKDKTTF EKLEYVMSKE DNYKRLRDYI SSLKMTPCIP ENSBTAP00000033902/1-583 PIFRLTKTWA LLSRKDKTTF EKLEYVMSKE DNYKRLRDYI SSLKMTPCIP BACU019537/1-526 PIFRLTKTWA LLSRKDKTTF EKLEYVMSKE DNYKRLRDYI SSLKMTPCIP 201 250 ENSTTRP00000008574/1-578 YLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI bmy_08538T0/1-389 --GIYLSDLT YIDSAYPSTG SILENEQRSN LMNNILRIIS DLQQSCEYDI ENSP00000356607/1-583 YLGIYLSDLT YIDSAYPSTG SILENEQRSN LMNNILRIIS DLQQSCEYDI ENSBTAP00000033902/1-583 YLGIYLSDLT YIDSAYPSTG SILENEQRSN LMNNILRIIS DLQQSCEYDI BACU019537/1-526 YLGIYLSDLT YIDSAYPSTG SILENEQRSN LMNNILRIIS DLQQSCEYDI 251 300 ENSTTRP00000008574/1-578 PMLPHVQKYL NSVQYIEELQ KFVEDDNYKL SLKIEPGTST PRSAASREDL bmy_08538T0/1-389 PMLPHVQKYL NSVQYIEELQ KFVEDDNYKL SLKIEPGTST PRSAASREDL ENSP00000356607/1-583 PMLPHVQKYL NSVQYIEELQ KFVEDDNYKL SLKIEPGTST PRSAASREDL ENSBTAP00000033902/1-583 PMLPHVQKYL NSVQYIEELQ KFVEDDNYKL SLKIEPGTST PRSAASREDL BACU019537/1-526 PMLPHVQKYL NSVQYIEELQ KFVEDDNYKL SLKIEPGTST PRSAASREDL 301 350 ENSTTRP00000008574/1-578 VGPEVGASPQ SGRKSVAAEG ALLPQTPPSP RNLIPHGHRK CHSLGYNFIH bmy_08538T0/1-389 VGPEVGASPQ SGRKSMAAEG ALLPQTPPSP RNLIPHGHRK CHSLGYNFIH ENSP00000356607/1-583 VGPEVGASPQ SGRKSVAAEG ALLPQTPPSP RNLIPHGHRK CHSLGYNFIH ENSBTAP00000033902/1-583 VGPEVGASPQ SGRKSMAAEG ALLPQTPPSP RNLIQHGHRK CHSLGYNFIH BACU019537/1-526 VGPEVGASPQ SGRKSMAAEG ALLPQTPPSP RNLIPHGHRK CHSLGYNFIH 351 400 ENSTTRP00000008574/1-578 KMNTAEFKSA TFPNAGPRHL LDDSVMEPHA PSRGQAESST LSSGISIGSS bmy_08538T0/1-389 KMNTAEFKSA TFPNAGPRHL LDDSVMEPHA PSRGQAESST LSSGISIGSS ENSP00000356607/1-583 KMNTAEFKSA TFPNAGPRHL LDDSVMEPHA PSRGQAESST LSSGISIGSS ENSBTAP00000033902/1-583 KMNTAEFKSA TFPNAGPRHL LDDSVMEPHA PSRGQAESST LSSGISIGSS BACU019537/1-526 KMNTAEFKSA TFPNAGPRHL LDDSVMEPHA PSRGQAESST LSSGISIGSS 401 450 ENSTTRP00000008574/1-578 DGSELSEETS WPAFERNRLY HSLGPVTRVA RNGYRSHMKA SSSAESEDLA bmy_08538T0/1-389 DGSELSEETS WPAFERNRLY HSLGPVTRVA RNGYRSHMKA SSSAESEDLA ENSP00000356607/1-583 DGSELSEETS WPAFERNRLY HSLGPVTRVA RNGYRSHMKA SSSAESEDLA ENSBTAP00000033902/1-583 DGSELSEETS WPAFERNRLY HSLGPVTRVA RNGYRSHMKA SSSAESEDLA BACU019537/1-526 DGSELSEETS WPAFERNRLY HSLGPVTRVA RNGYRSHMKA SSSAESEDLA 451 500 ENSTTRP00000008574/1-578 VHLYPGAVTI QGVLRRKTLL KEGKKPTVAS WTKYWAALCG TQLFYYAAKS bmy_08538T0/1-389 VHLYPGAVTI QGVLRRKTLL KEGKKPTVAS WTKYWAALCG TQLFYYAAKS ENSP00000356607/1-583 VHLYPGAVTI QGVLRRKTLL KEGKKPTVAS WTKYWAALCG TQLFYYAAKS ENSBTAP00000033902/1-583 VHLYPGAVTI QGVLRRKTLL KEGKKPTVAS WTKYWAALCG TQLFYYAAKS BACU019537/1-526 VHLYPGAVTI QGVLRRKTLL KEGKKPTVAS WTKYWAALCG TQLFYYAAKS 501 550 ENSTTRP00000008574/1-578 LKATERKHFK STSNKNVSVV GWMVMMADDP EHPDLFLLTD SEKG-SYKFQ bmy_08538T0/1-389 LKATERKHFK STSNKNVSVV GWMVMMADDP EHPDLFLLTD SEKGNSYKFQ ENSP00000356607/1-583 LKATERKHFK STSNKNVSVI GWMVMMADDP EHPDLFLLTD SEKGNSYKFQ ENSBTAP00000033902/1-583 LKATERKHFK STSNKNVSVV GWMVMMADDP EHPDLFLLTD SEKGNSYKFQ BACU019537/1-526 LKATERKHFK STSNKNVSVV GWMVMMADDP EHPDLFLLTD SEKG------ 551 600 ENSTTRP00000008574/1-578 AGSR--DALW FKHLS-ACQS -KQQVPTNLM TFE bmy_08538T0/1-389 AGNRMNAMLW FKHLSAACQS NKQQVPTNLM TFE ENSP00000356607/1-583 AGNRMNAMLW FKHLSAACQS NKQQVPTNLM TFE ENSBTAP00000033902/1-583 AGSRMNAMLW FKHLSAACQS NKQQVPTNLM TFE BACU019537/1-526 ---------- ---------- ---------- ---