KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:03 2014 Check: 00 .. Name: bmy_12762T0/1-251 Len: 383 Check: 6856 Weight: 1.00 Name: ENSTTRP00000004463/1-301 Len: 383 Check: 8012 Weight: 1.00 Name: BACU002965/1-383 Len: 383 Check: 7406 Weight: 1.00 Name: ENSP00000365397/1-302 Len: 383 Check: 779 Weight: 1.00 Name: ENSBTAP00000033930/1-218 Len: 383 Check: 6565 Weight: 1.00 // 1 50 bmy_12762T0/1-251 ---------- ---------- ---------- ---MEL---- ---------- ENSTTRP00000004463/1-301 MVWKWLGALV VFPLQMIYLV VKAAVGLVLP AKLRDLSREN VLITGGGRGI BACU002965/1-383 MVWKWLGALV VFPLQMIYLV VKAAVGLVLP AKLRDLSREN VLITGGGRGI ENSP00000365397/1-302 MVWKRLGALV MFPLQMIYLV VKAAVGLVLP AKLRDLSREN VLITGGGRGI ENSBTAP00000033930/1-218 ---------- -----MIYLV VKAAVGLVLP AKLRDLSREN VLITGGGRGI 51 100 bmy_12762T0/1-251 GRQETSSWKP Y--------- ---------- ---------I VLWGRTEKCL ENSTTRP00000004463/1-301 GRQLAREFAE RGARK----- ---------- ---------I VLWGRTEKCL BACU002965/1-383 GRQLAREFAE RGARKGVLPA MQTVLAFPVP CLLVFLCSQI VLWGRTEKCL ENSP00000365397/1-302 GRQLAREFAE RGARK----- ---------- ---------I VLWGRTEKCL ENSBTAP00000033930/1-218 GRQLAREFAE RGARK----- ---------- ---------I VLWGRTEKCL 101 150 bmy_12762T0/1-251 KETTEEIRQM GTECHYFICD VGNREEVYQT AKAVREKVGD ITILVNNAAV ENSTTRP00000004463/1-301 KETTEEIRQM GTECHYFICD VGNREEVYQT AKAVREKVGD ITILVNNAAV BACU002965/1-383 KETTEEIRQM GTECHYFICD VGNREEVYQT AKAVREKVGD ITILVNNAAV ENSP00000365397/1-302 KETTEEIRQM GTECHYFICD VGNREEVYQT AKAVREKVGD ITILVNNAAV ENSBTAP00000033930/1-218 KETTEEIRQM GTECHYFICD VGNREEVYQT AKAVREKVGD ITILVNNAAV 151 200 bmy_12762T0/1-251 VHGKSLMDSD DDALLKSQHI NTLGQFWTTK AFLPRMLELQ NGHIVCLNSV ENSTTRP00000004463/1-301 VHGKS-MDSD DDALLKSQHI NTLGQFWTTK AFLPRMLELQ NGHIVCLNSV BACU002965/1-383 VHGKSLMDSD DDALLKSQHI NTLGQFWTTK AFLPRMLELQ NGHIVCLNSV ENSP00000365397/1-302 VHGKSLMDSD DDALLKSQHI NTLGQFWTTK AFLPRMLELQ NGHIVCLNSV ENSBTAP00000033930/1-218 VHGKSLMDSD DDALLKSQHI NTLGQFWTTK AFLPRMLELQ NGHIVCLNSV 201 250 bmy_12762T0/1-251 LALSAIPGAI DYCTSKASAF AFMESLTLGL LDCPGVSATT VLPFHTSTEM ENSTTRP00000004463/1-301 LALSAIPGAI DYCTSKASAF AFMESLTLGL LDCPGVSATT VLPFHTSTEM BACU002965/1-383 LALSAIPGAI DYCTSKASAF AFMESLTLGL LDCPGVSATT VLPFHTSTEM ENSP00000365397/1-302 LALSAIPGAI DYCTSKASAF AFMESLTLGL LDCPGVSATT VLPFHTSTEM ENSBTAP00000033930/1-218 LALSAIPGAI DYCTSKASAF AFMESLTLGL LDCPGVSATT VLPFHTSTEM 251 300 bmy_12762T0/1-251 FQGMRV---- ---------- ---------- ---------- ---------- ENSTTRP00000004463/1-301 FQGMRV---- ---------- ---------- ---------- ---------- BACU002965/1-383 FQGMRVRTLR PALPDCRVVG ILAARHDGKG SQGLGASPVD SLRPAEPALG ENSP00000365397/1-302 FQGMRV---- ---------- ---------- ---------- ---------- ENSBTAP00000033930/1-218 FQGMRV---- ---------- ---------- ---------- ---------- 301 350 bmy_12762T0/1-251 ---------- ---RFPNLFP PLKPETVARR TVEAVQLNQA LLLLPWTMHA ENSTTRP00000004463/1-301 ---------- ---RFPNLFP PLKPETVARR TVEAVQLNQA LLLLPWTMHA BACU002965/1-383 AQELPFSQGD IIPRFPNLFP PLKPETVARR TVEAVQLNQA LLLLPWTMHA ENSP00000365397/1-302 ---------- ---RFPNLFP PLKPETVARR TVEAVQLNQA LLLLPWTMHA ENSBTAP00000033930/1-218 ---------- ---R------ ---------- ---------- ---------- 351 400 bmy_12762T0/1-251 LIILKSILPQ AALEEIHKFS GTYTCMNTFK GRT ENSTTRP00000004463/1-301 LIILKSILPQ AALEEIHKFS GTYTCMNTFK GRT BACU002965/1-383 LIILKSILPQ AALEEIHKFS GTYTCMNTFK GRT ENSP00000365397/1-302 LVILKSILPQ AALEEIHKFS GTYTCMNTFK GRT ENSBTAP00000033930/1-218 ---------- ---------- ---------- ---