KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:03 2014 Check: 00 .. Name: ENSP00000365116/1-268 Len: 610 Check: 663 Weight: 1.00 Name: ENSBTAP00000033942/1-268 Len: 610 Check: 9068 Weight: 1.00 Name: ENSTTRP00000014931/1-268 Len: 610 Check: 1176 Weight: 1.00 Name: bmy_09928T0/1-322 Len: 610 Check: 9536 Weight: 1.00 Name: BACU005668/1-529 Len: 610 Check: 6793 Weight: 1.00 // 1 50 ENSP00000365116/1-268 MLGITVLAAL LACASSCGVP SFPPNLSARV VGGEDARPHS WPWQISLQYL ENSBTAP00000033942/1-268 MLGITVFTTF LAYASSCGAP IFQPNLSARV VGGEDAIPHS WPWQISLQYL ENSTTRP00000014931/1-268 MLGVSVFTVL LAYASSCGVP IFRPNLSARV VGGDNAVPHS WPWQISLQYL bmy_09928T0/1-322 ---------- ---------- ---PNLSARV VGGDNAVPHS WPWQISLQYL BACU005668/1-529 MLGVTVFTAF LAYASSCGVP IFQPNLSARV VGGENAIPHS WPWQISLQYL 51 100 ENSP00000365116/1-268 KNDTWRHTCG GTLIASNFVL TAAHCISNTR TYRVAVGKNN LEVEDEEGSL ENSBTAP00000033942/1-268 RDNTWRHTCG GTLITPNHVL TAAHCISNTL TYRVALGKNN LEVEDEAGSL ENSTTRP00000014931/1-268 KNGVWRHTCG GTLITPSHVL TAAHCISNTL TYRVALGKNN LEVENEEGSV bmy_09928T0/1-322 KNGTWRHTCG GTLITPNHVL TAAHCISNTL TYRVGLGKNN LEVENEEGSL BACU005668/1-529 KNGKWRHTCG GTLISPKHVL TAAHCISDTL TYRVALGKNN LEVENEKGSL 101 150 ENSP00000365116/1-268 FVGVDTIHVH KRWNALLLR- ---------- ---------- ---------- ENSBTAP00000033942/1-268 YVGVDTIFVH EKWNSFLVR- ---------- ---------- ---------- ENSTTRP00000014931/1-268 VMGVDTIFVH EKWSSFLIR- ---------- ---------- ---------- bmy_09928T0/1-322 FVGVDTIFVH KKWNSFLIRH KVVRGGGEEA TPTGAGDGVR RQIIAPPASL BACU005668/1-529 FVGVDTIFVH KKWNSFLIR- ---------- ---------- ---------- 151 200 ENSP00000365116/1-268 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033942/1-268 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014931/1-268 ---------- ---------- ---------- ---------- ---------- bmy_09928T0/1-322 SASKKLEVQN VYRGSLLTLG PTPNSQLGSL SIGLGDQALL PFTTSTLDSS BACU005668/1-529 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000365116/1-268 NDIALIKLAE HVELSDTIQV ACLPEKDSLL PKDYPCYVTG WGRLWTNGPI ENSBTAP00000033942/1-268 NDIALIKLAE TVELSDTIQV ACLPEEGSLL PQDYPCFVTG WGRLYTNGPI ENSTTRP00000014931/1-268 NDIALIKLAE PVELSDTIQP ACLPEEGSLL PQDYPCYVTG WGRLWTNGPI bmy_09928T0/1-322 NDIALIKLAE TVELSDTIQL ACLPEEGSLL PQDYPCYVTG WGRLRTNGPI BACU005668/1-529 NDIALIKLAE PVELSDTIQL ACLPEEGSLL PQDYPCYVTG WGRLWTNGPI 251 300 ENSP00000365116/1-268 ADKLQQGLQP VVDHATCSRI DWWGFRVKKT MVCAGGDGVI SACNGDSGGP ENSBTAP00000033942/1-268 AAELQQGLQP VVDYATCSQR DWWGTTVKET MVCAGGDGVI SACNGDSGGP ENSTTRP00000014931/1-268 ADELQQGLQP VVDHATCSQK DWWGNNVKNT MVCAGGDGVI SACNGDSGGP bmy_09928T0/1-322 ADELQQGLQP VVDHATCSQK DWWGTMVKHT MVCAGGDGVI SACNGDSGGP BACU005668/1-529 ADELQQGLQP VVDHATCSQK DWWNTMVKDT MVCAGGDGVI SACNGDSGGP 301 350 ENSP00000365116/1-268 LNCQLENGSW EVFGIVSFGS RRGCNTRKKP VVYTRVSAYI DWIN------ ENSBTAP00000033942/1-268 LNCQAENGNW DVRGIVSFGS GLSCNTFKKP TVFTRVSAYI DWIN------ ENSTTRP00000014931/1-268 LNCQAKDGSW EVRGIVSFGS GLSCNTLKKP TVFTRVSAYN NWID------ bmy_09928T0/1-322 LNCQAQDGSW ELRGIVSFGS GLSCNTLRKP TVFTRVSAYI NWIN------ BACU005668/1-529 LNCQAQDGSW ELRGIVSFGS GLSCNTLKKP TVFTRVSAYI NWINQVSLQY 351 400 ENSP00000365116/1-268 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033942/1-268 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014931/1-268 ---------- ---------- ---------- ---------- ---------- bmy_09928T0/1-322 ---------- ---------- ---------- ---------- ---------- BACU005668/1-529 SSDGQWRHTC GGSLIDPNWV LTAAHYISSS RTYRVVLGRH CLTTHEPGSL 401 450 ENSP00000365116/1-268 ---------- ---------- ---------- ---------- ---EKMQL-- ENSBTAP00000033942/1-268 ---------- ---------- ---------- ---------- ---QKLQL-- ENSTTRP00000014931/1-268 ---------- ---------- ---------- ---------- ---EKLQL-- bmy_09928T0/1-322 ---------- ---------- ---------- ---------- ---Q------ BACU005668/1-529 VVKVSELVVQ EEWNSNQLSK GPLLQPKMPL LNGCPKSSLC QIFQKLRITA 451 500 ENSP00000365116/1-268 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033942/1-268 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014931/1-268 ---------- ---------- ---------- ---------- ---------- bmy_09928T0/1-322 ---------- ---------- ---------- ---------- ---------- BACU005668/1-529 LGRGGGHPVA KHPVILHPGS LLWSSTDDGA QRTRGVPSGA LPDVLQQGEL 501 550 ENSP00000365116/1-268 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033942/1-268 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014931/1-268 ---------- ---------- ---------- ---------- ---------- bmy_09928T0/1-322 ---------- ---------- ---------- ---------- ---------- BACU005668/1-529 LAMDSATCSQ PGWWGSTVKT SMICAGGDGV ISSCNNSGLP RGDSGGPLNC 551 600 ENSP00000365116/1-268 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033942/1-268 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014931/1-268 ---------- ---------- ---------- ---------- ---------- bmy_09928T0/1-322 ---------- ---------- ---------- ---------- ---------- BACU005668/1-529 QAANGQWQVH GVVRFGSSLS CNYYHKPSVF TQFSNYIDWI NSVRTGPALC 601 650 ENSP00000365116/1-268 ---------- ENSBTAP00000033942/1-268 ---------- ENSTTRP00000014931/1-268 ---------- bmy_09928T0/1-322 ---------- BACU005668/1-529 PPGPALALDP