KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:44:04 2014 Check: 00 .. Name: ENSBTAP00000033967/1-290 Len: 291 Check: 5633 Weight: 1.00 Name: ENSP00000357072/1-289 Len: 291 Check: 9085 Weight: 1.00 Name: bmy_06304T0/1-158 Len: 291 Check: 1126 Weight: 1.00 Name: ENSTTRP00000001712/1-285 Len: 291 Check: 6827 Weight: 1.00 // 1 50 ENSBTAP00000033967/1-290 MRALLWLLLL VLSQEAAEGY SGDGADPEEV VGILHESISL PLEMPFDEEV ENSP00000357072/1-289 MCAFPWLLLL LLLQEGSQRR LWRWCGSEEV VAVLQESISL PLEIPPDEEV bmy_06304T0/1-158 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001712/1-285 MGALPWLLLL LLFQEGSRRG LWRWRGSEEI VAVLQESISL P-EIPLDEEV 51 100 ENSBTAP00000033967/1-290 ENIIWSSHKR LATVVPEKEG HPATIMVTDP RYDGRVSFLE PTYSLHIQNL ENSP00000357072/1-289 ENIIWSSHKS LATVVPGKEG HPATIMVTNP HYQGQVSFLD PSYSLHISNL bmy_06304T0/1-158 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001712/1-285 ENIIWSSHIS LATVMPGEEG HPATIMVTNP RYEG-VSFLE PTYYLHISNL 101 150 ENSBTAP00000033967/1-290 SWEDSGSYQA QVNLRTSQVS TMQQYNLRVY QHLSQPHMTV KFEIPGEEGA ENSP00000357072/1-289 SWEDSGLYQA QVNLRTSQIS TMQQYNICVY RWLSEPQITV NFESSG-EGA bmy_06304T0/1-158 ---------- ---------- -MQHYNLXVY RWLSQPHMTV NFEISGEEG- ENSTTRP00000001712/1-285 SWENSGPYQA QVNLRASQIS TMQHYNLRVY RWLS-PHMAV NFEISGEED- 151 200 ENSBTAP00000033967/1-290 CNISLICSVE NAGLDVTYTW ISWEDGADAA HEGAILRAFW RPGDKAVSYT ENSP00000357072/1-289 CSMSLVCSVE KAGMDMTYSW LSRGDSTYTF HEGPVLSTSW RPGDSALSYT bmy_06304T0/1-158 ---------- KAGLDVTYCW ISWEDGADTA HEGSVLSTSW SPGDKAISYT ENSTTRP00000001712/1-285 CNMSLTST-- EAGLDVTYCW ISWEDGADTA HEGPVLSMSW RPGEKSVSYT 201 250 ENSBTAP00000033967/1-290 CRASNPVSNI TSRPIQAGSF CADPGYPLEK ASTSFCLLAK GLLILLLFGT ENSP00000357072/1-289 CRANNPISNV SSCPIPDGPF YADPNYASEK PSTAFCLLAK GLLIFLLLVI bmy_06304T0/1-158 CRANNPISDI SSRLIPAGPF CADLGYPSEK SSTSFCLLAK TLLILLFFVI ENSTTRP00000001712/1-285 CRANNPISDV SSHLIPAGPF CADIGYPLEK SSTSFCLLAK ALLMLLLFVI 251 300 ENSBTAP00000033967/1-290 LAMGFWFIRV QTRGKVLRMK KLKRDRMKLR RKGRPGPSLS - ENSP00000357072/1-289 LAMGLWVIRV QKRHKMPRMK KLMRNRMKLR KEAKPGSSPA - bmy_06304T0/1-158 LAVGLWLIRV QTRCKMPRMK KLRRNRMRLR KKGKPGPSLA - ENSTTRP00000001712/1-285 LAVGLWLIRV QTRCKMPRMK KLRRNRMRLR KKGKPGPSLA W