KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:05 2014 Check: 00 .. Name: ENSP00000367476/1-925 Len: 1279 Check: 8783 Weight: 1.00 Name: ENSBTAP00000033995/1-925 Len: 1279 Check: 1330 Weight: 1.00 Name: ENSTTRP00000011150/1-924 Len: 1279 Check: 1926 Weight: 1.00 Name: bmy_19563T0/1-868 Len: 1279 Check: 3585 Weight: 1.00 Name: BACU001132/1-1202 Len: 1279 Check: 1829 Weight: 1.00 // 1 50 ENSP00000367476/1-925 MPHKIGFVVV SSSGHEDGFS ARELMIHAPT VSGWRSPRFC QFPQEIVLQM ENSBTAP00000033995/1-925 MPHKIGFVVV SSSGHEDGFS ARELMIHAPT VSGWRSPRFC QFPQEIVLQM ENSTTRP00000011150/1-924 MPHKIGFVVV SSSGHEDGFS ARELMIHAPT VSGWRSPRFC QFPQEIVLQM bmy_19563T0/1-868 ---------- ---------- ---------- ---------- ---------M BACU001132/1-1202 MPHKIGFVVV SSSGHEDGFS ARELMTHAPT VSGWRSPRFC QFPQEIVLQM 51 100 ENSP00000367476/1-925 VERCRIRKLQ LLAHQYMISS KIEFYISESL PEYFAPYQAE RFRRLGYVSL ENSBTAP00000033995/1-925 VERCRIRKLQ LLAHQYMIPS KVEFYISESL PEYFTPYQAE RFRRLGYVSL ENSTTRP00000011150/1-924 VERCRIRKLQ LLAHQYMISS KIEFYVSESL PEYFAPYQAE RFRRLGYVSL bmy_19563T0/1-868 VERCRIRKLQ LLAHQYMIAS KIEFYVSESL PEYFAPYQAE QFRRLGYVSL BACU001132/1-1202 VERCRIRKLQ LLAHQYMIAS KIEFYVSESL PEYFAPYQAE RFRRLGYVSL 101 150 ENSP00000367476/1-925 CDNEKTGCKA RELKSVYVDA VGQFLKLIFH QNHVNKYNIY NQVALVAINI ENSBTAP00000033995/1-925 CDNEKTGCKA RELKSVYVDA VGQFLKLIFH QNHVNKYNVY NQVALVAVNI ENSTTRP00000011150/1-924 CDNEKTGCKA RELKSVYVDA VGQFLKLIFH QNHINKYNVY NQVALVAINI bmy_19563T0/1-868 CDNEKTGCKA RELKSVYVDA VGQFLKLIFH QNHINKYNVY NQVALVAINI BACU001132/1-1202 CDNEKTGCKA RELKSVYVDA VGQFLKLIFH QNHINKYNVY NQVALVAINI 151 200 ENSP00000367476/1-925 IGDPADFSDE SNTASREKLI DHYLGHNSED PALEGTYARK SDYISPLDDL ENSBTAP00000033995/1-925 IGDPADFGDE SNITSREKLI DHYLGHNAED PALEGTCSGK SDYISPLDDL ENSTTRP00000011150/1-924 IGDPADFSDE SNITSREKLI DHYLGHNTED PALEGTCSGK SDYISPLDDL bmy_19563T0/1-868 IGDPADFSDE SNITSREKLI DHYLGHNTED PALEGTCSGK SDYISPLDDL BACU001132/1-1202 IGDPADFSDE SNIPEMLR-- ---------- -------NGK SDYISPLDDL 201 250 ENSP00000367476/1-925 AFDMYQDPEV AQIIRKLDER KREAVQKERY DYAKKLKQAI ADLQKVGERL ENSBTAP00000033995/1-925 AFDMYQDPEV AQIIRRLDER KREAVQKERY DYAKKLKQAI ADLQKVGERL ENSTTRP00000011150/1-924 AFDMYQDPEV AQIIRRLDER KREAAQRERY DDAKTLKQAI ADLQKVGERL bmy_19563T0/1-868 AFDMYQDPEV AQIIRRLDER KREAAQRERY DDAKMLKQAI ADLQKVGERL BACU001132/1-1202 AFDMYQDPEV AQIIRRLDER KREAAQRERY DDAKTLKQAI ADLQKVGERL 251 300 ENSP00000367476/1-925 GRYEVEKRCA VEKEDYDLAK EKKQQMEQYR AEVYEQLELH SLLDAELMRR ENSBTAP00000033995/1-925 GRYEVEKRCA VEKEDYDLAK EKKQQMERFR SRVYEQLQLH ELVDAELMRR ENSTTRP00000011150/1-924 GRYEVEKRRA VEKEDYDLAK EKKQQMARYR SQVYGRLQLH GLVDAELIRR bmy_19563T0/1-868 G------RCA VEKEDHDLAK E-KQQTERHR -RAYGQLRRH ELVGAELIRR BACU001132/1-1202 GRYEVEKRCA VEKEDYDLAK EKKQQMERYR SRVYGQLRLH ELVGAELIRR 301 350 ENSP00000367476/1-925 PFDLPLQPLA RSGSPCHQKP MPSLPQLEER GTENQFAEPF LQEKPSSYSL ENSBTAP00000033995/1-925 PLDLPLQPLA CPSSPHHQPP MRSLPQPEER VSENRLADPF LQEKPSSHCL ENSTTRP00000011150/1-924 PLDLPLQPLV RSNSPRHQQP ALSLPQPEER GTENQFADRF LQEKPSSHPL bmy_19563T0/1-868 PLDLPLQPLV HSSSPRHQHP TLSLPQPEER GTENRFADPF LQEKPSLHPL BACU001132/1-1202 PLDLPLQPLV CSSSPCHQQP ALTLPQPEER GTENRFADPF LQEKPSSHPL 351 400 ENSP00000367476/1-925 TISPQHSAVD PLLPATDPHP KINAESLPYD ERPLPAIRKH YGEAVVEPEM ENSBTAP00000033995/1-925 DVSPQRPTVD RPPPATDPPP KTHPDSLPYD ERPLPVTRKQ LGAAVSEAER ENSTTRP00000011150/1-924 DISPQHCVVD WSPPAAGLPP KAHLESLPYD ERPLPATRKQ PGAVATEPET bmy_19563T0/1-868 DISPQHCAVD RSPPAADPPP KAHLEFLPYD ERPLPATRKQ PGAVAAEPER BACU001132/1-1202 DISPQHCAVD RSPPAADPPP KTHLESLPYD ERPLPATCKQ PGAVAAEPER 401 450 ENSP00000367476/1-925 SNADISDARR GGMLGEPEPL TEKALREASS AIDVLGETLV AEAYCKTWSY ENSBTAP00000033995/1-925 RDVLGDEARR ADTAGEPEPL TEKALREASS AVDVLGEALV AGAYSKTWSH ENSTTRP00000011150/1-924 RDTDSSEPPR AGTVGEPEPL TEKALREASS AVDVLGEALV AGAYSKTWSH bmy_19563T0/1-868 RDTDSGEPPR AGTAGEPEPL TEKALREASS AVDLLGEALV AGAYSKTWSH BACU001132/1-1202 RDTDSGEPPR VGTAAEPEPL TEKALREASS AVDVLGEALV AGAYSKTWSH 451 500 ENSP00000367476/1-925 REDALLALSK KLMEMPVGTP KEDLKNTLRA SVFLVRRAIK DIVTSVFQAS ENSBTAP00000033995/1-925 REDALLTLHK QLTDTPVGTP KEDLKSTLRA AVFLVRRAIR DIVTPVFQAS ENSTTRP00000011150/1-924 REDALLALYK QLMDAPAATP KEDLKSTLRA AVFLIRRAVR DIVTPVFQAS bmy_19563T0/1-868 REDALLALYK QLMDAPAATP KEDLKSTLRA AVFLIRRAIR DIVTPVFQAS BACU001132/1-1202 REDALLALYK QLMDAPAATP KEDLKSTLRA AVFLIRRAIR DIVTP----- 501 550 ENSP00000367476/1-925 LKLLKMIITQ YIPKHKLSKL ETAHCVERTI PVLLTRTGDS SARLRVTAAN ENSBTAP00000033995/1-925 LKLLKMIITQ YIPKHKLGRL ETAHCVERTI PVLLTRTGDS SARLRVMASN ENSTTRP00000011150/1-924 LKLLKMLITQ YIPKHKLGKL ETTHCVERTI PVLLTRTGDS SARLRVIASN bmy_19563T0/1-868 LKLLKMIITQ YIPKHKLGKL ETTHCVERTI PVLLTRTGDS SARLRVTASN BACU001132/1-1202 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000367476/1-925 FIQEMALFKE VKSLQIIPSY LVQPLKANSS VHLAMSQMGL LARLLKDLGT ENSBTAP00000033995/1-925 FIQEIALFKE VKSLQVIPSY LVQPLKANSS THLAMSQMAL LARLLRDLGT ENSTTRP00000011150/1-924 FIQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19563T0/1-868 FIQEMALFKE VKSLQLIPSY LVQPLKANSS AHLAMSQMAL LARLLRDLGT BACU001132/1-1202 ---EMALFKE VKSLQLIPSY LVQPLKANSS AHLAMSQMAL LARLLQDLGT 601 650 ENSP00000367476/1-925 GSSGFTIDNV MKFSVSALEH RVYEVRETAV RIILDMYRQH QASILEYLPP ENSBTAP00000033995/1-925 EGAGFTVDSV MRFSVQALEH RVREVREAAV GMILDLYAQH RALVLEYLPP ENSTTRP00000011150/1-924 XXXXXXXXXX XXFAVRALEH REHKVRDSAV GMILDLYAQH RALVLECLPP bmy_19563T0/1-868 EGMGFTVDSV MRFAVRALEH REQKVRETAV GLILGLYAQH RARVLECLPP BACU001132/1-1202 EGMGFTVDSV MQFAVRALEH REQKVREAAV GLVLGLYAQH RTRVLERLPP 651 700 ENSP00000367476/1-925 DDSNTRRNIL YKTIFEGFAK IDGRATDAEM RARRKAATEE AEKQKKEEIK ENSBTAP00000033995/1-925 DDSTTRRNVL YKTIFEGFAK IDGRPTDAEM RAQKRAAAEE AEKRKKEEIR ENSTTRP00000011150/1-924 EESATRRSVL YKTLFEGFAT IDGRPTDAEI RAQKRAATEE AEKRKKEEIK bmy_19563T0/1-868 EERAARRSIL YKTLFEGFAT IDGRPTDAEI RAQKRAATEE AEKRKKEEIK BACU001132/1-1202 EECAARRSVL YRTLFEGFAT IDGRPTDAEV RAQKRAATEE AEKQKKDEIK 701 750 ENSP00000367476/1-925 ALQGQLAALK EIQAEVQEKE SDAVKPKNQD IQGGKAAPAE ALGIPDEHYL ENSBTAP00000033995/1-925 ALQGQLAALK EMQAEVQEKE SEATKAKNQD TQERKVAPPN APEIPDNHYL ENSTTRP00000011150/1-924 ALQGQSATLK EMQAEVQEKE SEAAKAESQD TQGRKAAPPN APEIPDNHYL bmy_19563T0/1-868 ALQGQLAALK EMQADVQEKE SEAAKAKNQD TQGRKAAPPN APEIPDNHYL BACU001132/1-1202 ALQGQLAALK EMQADVQEKE SETAKAKNQD TQGRKAAPPN VPEIPDNHYL 751 800 ENSP00000367476/1-925 DNLCIFCGER SESFTEEGLD LHYWKHCLML TRCDHCKQVV EISSLTEHLL ENSBTAP00000033995/1-925 DNLCIFCGER SESFTEEGLD LHYWKHCLML TRCEHCRQVV EISSLTEHLL ENSTTRP00000011150/1-924 DNLCIFCGER SDSFTEEGLD LHCWKHCLML TRCDH-KQVV EISSLTEHLL bmy_19563T0/1-868 DNLCIFCGER SDSFTEEGLD LHYWKHCPML TRCDYCKQVV EICSLTEHLL BACU001132/1-1202 DNLCIFCGER SDSFTEEGLD LHYWKDCLML TRCDYCKQVV EICSLTEHLL 801 850 ENSP00000367476/1-925 TECDKKDGFG KCYRCSEAVF KEELPRHIKH KDCNPAKPEK LANRCPLCHE ENSBTAP00000033995/1-925 TECDQKDGFG RCYRCSEAVS KEELPRHVKT RDCNPAKSEK LANRCPLCHE ENSTTRP00000011150/1-924 TECDKKDSFG ECYRCSEAIL KEELPRHIKT RDCNPAKAEK LANRCPLCHE bmy_19563T0/1-868 TECDKKDGFG ECYRCSEAVL KEELPRHIKT RDCNPAKAEK LANRCPLCHE BACU001132/1-1202 TECDKKDGFG ECYRCSEAVL KEELPRHIKT RECNPAKAEK LANRCPLCHE 851 900 ENSP00000367476/1-925 NFSPGEEAWK AHLMGPAGCT MNLRKTHILQ KAPALQPGKS SAVAASGPLG ENSBTAP00000033995/1-925 NFSPGEEAWK AHLMGPAGCT MNLRRTHVLH RTPVLPPGKG PAATRAGTSG ENSTTRP00000011150/1-924 NFTPGEEAWK AHLMGPTGCT VNLRRTHVLR KAPTLPPGRG PAAAKSGTSG bmy_19563T0/1-868 NFTPGEEAWK AHLMGPAGCT VNLRRTHVLR KAPTLPPGKG PAATKSGTSG BACU001132/1-1202 NIPPGEEAWK AHLMGPAGCT VNLRRTHVLR KAPTLPPGKG PAATKSGTSG 901 950 ENSP00000367476/1-925 SKA------- ---------- ---------- GSKIPTPK-- ---------- ENSBTAP00000033995/1-925 SKV------- ---------- ---------- GSKIPTPK-- ---------- ENSTTRP00000011150/1-924 SKV------- ---------- ---------- GSKIPTPK-- ---------- bmy_19563T0/1-868 SKV------- ---------- ---------- GSKIPTPK-- ---------- BACU001132/1-1202 SKTLDLSNNQ LSEIPAELAD CPKLKDINFR GNRLRDKRLE KMVSGCQTRS 951 1000 ENSP00000367476/1-925 -------GGL SKSSSR---- ---------- ---------- ---------- ENSBTAP00000033995/1-925 -------GGL SKGSSR---- ---------- ---------- ---------- ENSTTRP00000011150/1-924 -------GGL SRSSGR---- ---------- ---------- ---------- bmy_19563T0/1-868 -------GGL SKSSGR---- ---------- ---------- ---------- BACU001132/1-1202 ILEYLRAGGR GGGRGRGKAE GPDREEARRK RRERRKRECG EAEEAWVDEA 1001 1050 ENSP00000367476/1-925 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033995/1-925 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011150/1-924 ---------- ---------- ---------- ---------- ---------- bmy_19563T0/1-868 ---------- ---------- ---------- ---------- ---------- BACU001132/1-1202 SRLLLRVLHV AENPAPLTVT VSPGVGDVRP FIVGAVVRGM DLQPGNALKR 1051 1100 ENSP00000367476/1-925 ---------- ---------- ---------- ---TYAKR-- ---------- ENSBTAP00000033995/1-925 ---------- ---------- ---------- ---TYTKR-- ---------- ENSTTRP00000011150/1-924 ---------- ---------- ---------- ---TYTKR-- ---------- bmy_19563T0/1-868 ---------- ---------- ---------- ---TYTKQ-- ---------- BACU001132/1-1202 FLSSQTKLHE DLCEKRTAAT IATHDLRAIR GPLLYAARPP QDLRIVPLGR 1101 1150 ENSP00000367476/1-925 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033995/1-925 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011150/1-924 ---------- ---------- ---------- ---------- ---------- bmy_19563T0/1-868 ---------- ---------- ---------- ---------- ---------- BACU001132/1-1202 REAKAKDLVR QLQLEAEEHR KQKRRQNVSG LHRYLHLLDG KEHYPCLVDA 1151 1200 ENSP00000367476/1-925 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033995/1-925 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011150/1-924 ---------- ---------- ---------- ---------- ---------- bmy_19563T0/1-868 ---------- ---------- ---------- ---------- ---------- BACU001132/1-1202 NGDVISFPPI TNSEKTKIKK TTCDLFLEVT SAASLQICKD IMDALILKMA 1201 1250 ENSP00000367476/1-925 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000033995/1-925 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011150/1-924 ---------- ---------- ---------- ---------- ---------- bmy_19563T0/1-868 ---------- ---------- ---------- ---------- ---------- BACU001132/1-1202 EINKYTLENK DEGSLSDHEV DAIPGQVSDP RATPGAEQAG SAPLVVEQVR 1251 1300 ENSP00000367476/1-925 ---------- ---------- --------- ENSBTAP00000033995/1-925 ---------- ---------- --------- ENSTTRP00000011150/1-924 ---------- ---------- --------- bmy_19563T0/1-868 ---------- ---------- --------- BACU001132/1-1202 VVDEEGHLKV VYPSKTDLDL AAAHVTVLR